| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is pgsA [H]
Identifier: 39996924
GI number: 39996924
Start: 1993154
End: 1993747
Strand: Reverse
Name: pgsA [H]
Synonym: GSU1825
Alternate gene names: 39996924
Gene position: 1993747-1993154 (Counterclockwise)
Preceding gene: 39996925
Following gene: 39996922
Centisome position: 52.27
GC content: 55.22
Gene sequence:
>594_bases ATGGCCCCCGAATCCGCCAGCACCATCTGGAACGTGCCCAATATCCTGACCCTTGTCCGAATTGCCCTGATTCCGGTCAT GGCGGTACTGTTGCTTTCGCCCTCGAAAGAAGCGGGCTTCTGGGCAGCAGCGGTTTTCGCAATAGCCTCGGTCACCGACT GGCTGGACGGCTACCTGGCGCGCAAGATGGAGATCGTCACGGTGTTCGGCAAGTTTCTCGATCCCATTGCCGACAAGCTG ATGGTGATGGCGGCACTGATCATGGTTCTTCCCTTCAACAGAATACCCGCCTGGATGGTGCTGGTCATCCTTGGCAGAGA AATCATCATTACGGGCCTGCGCGGCATCGCCTCCACCGAAGGGATCGTCATCCCGGCCAGTGATCTGGGTAAATTCAAGA CCATCTTTCAGATCGTGGCCATCCTCGGCATCCTGCTCCACTTCGATTACCACTGGTTCTTCGGCATCGATCATCCCTAT CTTTACGTAAATATGCATAACGTGGGGATGTTCTACCTCTGGATCGCCACCATCATTACCATCTGGTCCGGTGTCGACTA CCTCGTCAAGTTCACCAAGGTTATTGCCCGCTAG
Upstream 100 bases:
>100_bases TTGCCCAGTACGGAGGCGTCCCCCCGTACCAGGAAACCCGCACCTATATTGATCGGGTGCTCAGTTACCAGAAATCCTAC CAGACGAATTGAGACAGCCA
Downstream 100 bases:
>100_bases CGGGTGCTATTTGTCCAGCGGCACCGGTTCGCAGACATTGTCGGCCGAGTTAGCCTCAGCACCGCACATGAAACAGGATA CCGTGGGCGATGATGTCAGG
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAPESASTIWNVPNILTLVRIALIPVMAVLLLSPSKEAGFWAAAVFAIASVTDWLDGYLARKMEIVTVFGKFLDPIADKL MVMAALIMVLPFNRIPAWMVLVILGREIIITGLRGIASTEGIVIPASDLGKFKTIFQIVAILGILLHFDYHWFFGIDHPY LYVNMHNVGMFYLWIATIITIWSGVDYLVKFTKVIAR
Sequences:
>Translated_197_residues MAPESASTIWNVPNILTLVRIALIPVMAVLLLSPSKEAGFWAAAVFAIASVTDWLDGYLARKMEIVTVFGKFLDPIADKL MVMAALIMVLPFNRIPAWMVLVILGREIIITGLRGIASTEGIVIPASDLGKFKTIFQIVAILGILLHFDYHWFFGIDHPY LYVNMHNVGMFYLWIATIITIWSGVDYLVKFTKVIAR >Mature_196_residues APESASTIWNVPNILTLVRIALIPVMAVLLLSPSKEAGFWAAAVFAIASVTDWLDGYLARKMEIVTVFGKFLDPIADKLM VMAALIMVLPFNRIPAWMVLVILGREIIITGLRGIASTEGIVIPASDLGKFKTIFQIVAILGILLHFDYHWFFGIDHPYL YVNMHNVGMFYLWIATIITIWSGVDYLVKFTKVIAR
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=184, Percent_Identity=36.4130434782609, Blast_Score=103, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6320059, Length=219, Percent_Identity=29.6803652968037, Blast_Score=78, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 22027; Mature: 21896
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPESASTIWNVPNILTLVRIALIPVMAVLLLSPSKEAGFWAAAVFAIASVTDWLDGYLA CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RKMEIVTVFGKFLDPIADKLMVMAALIMVLPFNRIPAWMVLVILGREIIITGLRGIASTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GIVIPASDLGKFKTIFQIVAILGILLHFDYHWFFGIDHPYLYVNMHNVGMFYLWIATIIT CEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEEECHHHHHHHHHHHHH IWSGVDYLVKFTKVIAR HHCCHHHHHHHHHHHCC >Mature Secondary Structure APESASTIWNVPNILTLVRIALIPVMAVLLLSPSKEAGFWAAAVFAIASVTDWLDGYLA CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RKMEIVTVFGKFLDPIADKLMVMAALIMVLPFNRIPAWMVLVILGREIIITGLRGIASTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC GIVIPASDLGKFKTIFQIVAILGILLHFDYHWFFGIDHPYLYVNMHNVGMFYLWIATIIT CEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEEECHHHHHHHHHHHHH IWSGVDYLVKFTKVIAR HHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7750561; 9384377 [H]