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The map label for this gene is ydiB [H]

Identifier: 39996899

GI number: 39996899

Start: 1966661

End: 1967146

Strand: Reverse

Name: ydiB [H]

Synonym: GSU1800

Alternate gene names: 39996899

Gene position: 1967146-1966661 (Counterclockwise)

Preceding gene: 39996900

Following gene: 39996898

Centisome position: 51.58

GC content: 55.35

Gene sequence:

>486_bases
GTGGTGTTTAATGTCACTTCGCGGTGCGAGGAGGAGACCGAGCGACTCGGGGAACTTCTGGGCAGAGAGCTGTCAGCCGG
GGCATTCGTTGCCCTGGCGGGGGAGTTGGGAAGCGGAAAAACCCGGTTTGCCCGCGGAGTGGCGCGCGGACTCGGCGTTG
CTGAAACGGTCCCCATAACCAGCCCGACCTTTACCCTCCTCAATGAATACCGAGGCCGTATTCCCCTCTACCATTTCGAT
CTGTACCGGCTGGGCGGCGTTGACGACGCAGCGGCTCTCGGTTTCGACGAATACTTCCATGGAACAGGTGTTTGTCTCGT
GGAATGGGCCGAACGTCTGGGTGATGATCTGCCTGTGGAGCGGATTGACATCACCTTTCGACACGAGGATGAAACCATCC
GTCTTCTGGAGTTCGTTCCTTACGGCATAACCTATGAAGCTTTATTAAAAAAATGTTTTGACCACTGGTCTGATTCCTGC
TATTAA

Upstream 100 bases:

>100_bases
CCAACAAAAAGCTCCACACGCTTCCGGTGGTTGAAGGGAAGAAGCTCGTGGGAATTGTCTCCCGTATTGATCTCATCAGA
ACCATGGTGGGGTAGGACGC

Downstream 100 bases:

>100_bases
GTGACGACCTGCGGTCGTGTCCTGTATACAAACTGCAGTATGACACATATGATCCAGAGCAAAGGAGGAACGGTAGATGG
CACTGGTGGTCCAGAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVFNVTSRCEEETERLGELLGRELSAGAFVALAGELGSGKTRFARGVARGLGVAETVPITSPTFTLLNEYRGRIPLYHFD
LYRLGGVDDAAALGFDEYFHGTGVCLVEWAERLGDDLPVERIDITFRHEDETIRLLEFVPYGITYEALLKKCFDHWSDSC
Y

Sequences:

>Translated_161_residues
MVFNVTSRCEEETERLGELLGRELSAGAFVALAGELGSGKTRFARGVARGLGVAETVPITSPTFTLLNEYRGRIPLYHFD
LYRLGGVDDAAALGFDEYFHGTGVCLVEWAERLGDDLPVERIDITFRHEDETIRLLEFVPYGITYEALLKKCFDHWSDSC
Y
>Mature_161_residues
MVFNVTSRCEEETERLGELLGRELSAGAFVALAGELGSGKTRFARGVARGLGVAETVPITSPTFTLLNEYRGRIPLYHFD
LYRLGGVDDAAALGFDEYFHGTGVCLVEWAERLGDDLPVERIDITFRHEDETIRLLEFVPYGITYEALLKKCFDHWSDSC
Y

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=123, Percent_Identity=34.9593495934959, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 18062; Mature: 18062

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFNVTSRCEEETERLGELLGRELSAGAFVALAGELGSGKTRFARGVARGLGVAETVPIT
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
SPTFTLLNEYRGRIPLYHFDLYRLGGVDDAAALGFDEYFHGTGVCLVEWAERLGDDLPVE
CCHHHHHHHHCCCCCEEEEHHHHCCCCCCHHHHCHHHHHCCCCHHHHHHHHHCCCCCCCE
RIDITFRHEDETIRLLEFVPYGITYEALLKKCFDHWSDSCY
EEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVFNVTSRCEEETERLGELLGRELSAGAFVALAGELGSGKTRFARGVARGLGVAETVPIT
CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
SPTFTLLNEYRGRIPLYHFDLYRLGGVDDAAALGFDEYFHGTGVCLVEWAERLGDDLPVE
CCHHHHHHHHCCCCCEEEEHHHHCCCCCCHHHHCHHHHHCCCCHHHHHHHHHCCCCCCCE
RIDITFRHEDETIRLLEFVPYGITYEALLKKCFDHWSDSCY
EEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]