| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39996900
Identifier: 39996900
GI number: 39996900
Start: 1967152
End: 1967601
Strand: Reverse
Name: 39996900
Synonym: GSU1801
Alternate gene names: NA
Gene position: 1967601-1967152 (Counterclockwise)
Preceding gene: 39996901
Following gene: 39996899
Centisome position: 51.59
GC content: 53.78
Gene sequence:
>450_bases ATGAAGACTGTGCGCGACATAATGACAACCAACGTTGTTACAGCCAGGCGTGAGACCACCATACGGGAGCTTGCCGAGCT TTTTTCGAAATACCGGATCGGGAGTATCCCCGTTGTCGACGAAGCGGGCAACCTGGCGGGCATCGTCACCGAGTCCGACT TGATTGAGCAGGACAAAAGCCTGCACATTCCGACGGTCATATCGCTTTTCGATTGGGTTATCTATCTGGAAAGTGCCAAG AAGTTTGAACGGGAGATCCAGAAGGTAACCGGCCAGACCGCCGGAGATATCTATACCACCGAGGTTGAGAGCGTGACGCC GGAAACCCCGGTGAGCACGGTCGCTGATATCATGGCCAACAAAAAGCTCCACACGCTTCCGGTGGTTGAAGGGAAGAAGC TCGTGGGAATTGTCTCCCGTATTGATCTCATCAGAACCATGGTGGGGTAG
Upstream 100 bases:
>100_bases TTGCTGCGGACAAGGGCGAGACAGGCATGTCCGCTCTCGATGTCCAGGAGCGGCTACCCTATGCATTCAATTCACTGATC CGTTTGAAGGGAGAACAATA
Downstream 100 bases:
>100_bases GACGCGTGGTGTTTAATGTCACTTCGCGGTGCGAGGAGGAGACCGAGCGACTCGGGGAACTTCTGGGCAGAGAGCTGTCA GCCGGGGCATTCGTTGCCCT
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; Signal Transduction Protein; IMP Dehydrogenase; Signal-Transduction Protein; CBS Domain-Containing Membrane Protein; CBS Domain Containing Protein; Signal Transduction Protein With CBS Domains; CBS Domain Protein/ACT Domain Protein; CBS Domain Pair-Containing Protein; Cbs Domain; IMP Dehydrogenase-Like Protein; Cbs Domain Containing Protein; UspA Domain Protein; Signal Transduction Protein With Cbs Domains; CBS Domain Family Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKTVRDIMTTNVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLIEQDKSLHIPTVISLFDWVIYLESAK KFEREIQKVTGQTAGDIYTTEVESVTPETPVSTVADIMANKKLHTLPVVEGKKLVGIVSRIDLIRTMVG
Sequences:
>Translated_149_residues MKTVRDIMTTNVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLIEQDKSLHIPTVISLFDWVIYLESAK KFEREIQKVTGQTAGDIYTTEVESVTPETPVSTVADIMANKKLHTLPVVEGKKLVGIVSRIDLIRTMVG >Mature_149_residues MKTVRDIMTTNVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLIEQDKSLHIPTVISLFDWVIYLESAK KFEREIQKVTGQTAGDIYTTEVESVTPETPVSTVADIMANKKLHTLPVVEGKKLVGIVSRIDLIRTMVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16531; Mature: 16531
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVRDIMTTNVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLIEQDKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECHHHHHCCCC LHIPTVISLFDWVIYLESAKKFEREIQKVTGQTAGDIYTTEVESVTPETPVSTVADIMAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHC KKLHTLPVVEGKKLVGIVSRIDLIRTMVG CCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTVRDIMTTNVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLIEQDKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECHHHHHCCCC LHIPTVISLFDWVIYLESAKKFEREIQKVTGQTAGDIYTTEVESVTPETPVSTVADIMAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHC KKLHTLPVVEGKKLVGIVSRIDLIRTMVG CCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA