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The map label for this gene is ycdQ [C]

Identifier: 39996888

GI number: 39996888

Start: 1952637

End: 1953356

Strand: Reverse

Name: ycdQ [C]

Synonym: GSU1789

Alternate gene names: 39996888

Gene position: 1953356-1952637 (Counterclockwise)

Preceding gene: 39996889

Following gene: 39996887

Centisome position: 51.21

GC content: 54.17

Gene sequence:

>720_bases
TTGAGAACCGTTGTCGTCATTCCGACGTACAATGAGCGTGATACGATCGAGCGACTGATCAACGACGTGCTGGCGCAGGA
CAAGGACATTCACGTGCTGGTCGTGGACGACAACTCCCCGGACGGCACTGGAGAGATTGTAGACCGGTTGTCCGAGGGGA
AGGGACGGGTTCATGTGCTGCACCGTCCAGGCAAGATGGGCCTTGGCTCGGCGTATCGCCAGGGCTTCGCCGCGGCACTT
GCCATGGACGCCGACTTCATTGTCGAAATGGATGCCGATTATTCTCATGACCCGGCAACACTGCCACGGTTCCTGGAGGC
CATGGAGGGGTGTGACCTGGTCATCGGCTCTCGATATCTGAACGGCATCAGCGTGGTCAACTGGCCTCTCCGTCGGCTCA
TGCTGAGTTATTTCGCTAACTGGTACACGAGATTGATCACCGGCTTGCGCATCATGGATTGCACAAGCGGGTTCAAATGT
TTTCGCCGTAGGGTGATCGAATCGATCGATATGAGCACTATTCGCTCTGACGGTTACTCGTTTCAGATTGAAATGAACTA
TCGGTGCGTGGAAAAAGGTTTTCAGGTTAGGGAAATCCCAATCATCTTCATCGACCGGCGTTCGGGCAGCTCAAAAATGT
CCAAGAAAATTGTACGTGAAGCCGTGTTCATGGTGTGGAAACTCAAGCTCGGCTCTGTTTTCGGGGCGTTGTTCCGCTAG

Upstream 100 bases:

>100_bases
TATCCATTAATTATTAAGAAGATGTGAGCGCGCCGTTTATGGAGGTCGATGACGCGCGTTTGCCTCACCTGGTTTTCATT
CAATTATCTGGAGGCACAAC

Downstream 100 bases:

>100_bases
GAGGACGATATGCTCGACGTAACATGGGCGTTTGCCGCTCAGGTCGGTTTATGGGGATGGATTTGTTCCATGATAGGGTT
CATTATGCGGGCCTTTCCCG

Product: glycosyl transferase group 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRTVVVIPTYNERDTIERLINDVLAQDKDIHVLVVDDNSPDGTGEIVDRLSEGKGRVHVLHRPGKMGLGSAYRQGFAAAL
AMDADFIVEMDADYSHDPATLPRFLEAMEGCDLVIGSRYLNGISVVNWPLRRLMLSYFANWYTRLITGLRIMDCTSGFKC
FRRRVIESIDMSTIRSDGYSFQIEMNYRCVEKGFQVREIPIIFIDRRSGSSKMSKKIVREAVFMVWKLKLGSVFGALFR

Sequences:

>Translated_239_residues
MRTVVVIPTYNERDTIERLINDVLAQDKDIHVLVVDDNSPDGTGEIVDRLSEGKGRVHVLHRPGKMGLGSAYRQGFAAAL
AMDADFIVEMDADYSHDPATLPRFLEAMEGCDLVIGSRYLNGISVVNWPLRRLMLSYFANWYTRLITGLRIMDCTSGFKC
FRRRVIESIDMSTIRSDGYSFQIEMNYRCVEKGFQVREIPIIFIDRRSGSSKMSKKIVREAVFMVWKLKLGSVFGALFR
>Mature_239_residues
MRTVVVIPTYNERDTIERLINDVLAQDKDIHVLVVDDNSPDGTGEIVDRLSEGKGRVHVLHRPGKMGLGSAYRQGFAAAL
AMDADFIVEMDADYSHDPATLPRFLEAMEGCDLVIGSRYLNGISVVNWPLRRLMLSYFANWYTRLITGLRIMDCTSGFKC
FRRRVIESIDMSTIRSDGYSFQIEMNYRCVEKGFQVREIPIIFIDRRSGSSKMSKKIVREAVFMVWKLKLGSVFGALFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=217, Percent_Identity=35.0230414746544, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71999402, Length=229, Percent_Identity=34.9344978165939, Blast_Score=137, Evalue=7e-33,
Organism=Saccharomyces cerevisiae, GI6325441, Length=223, Percent_Identity=30.0448430493274, Blast_Score=105, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24585265, Length=217, Percent_Identity=35.0230414746544, Blast_Score=133, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27262; Mature: 27262

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVVVIPTYNERDTIERLINDVLAQDKDIHVLVVDDNSPDGTGEIVDRLSEGKGRVHVL
CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEE
HRPGKMGLGSAYRQGFAAALAMDADFIVEMDADYSHDPATLPRFLEAMEGCDLVIGSRYL
ECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHH
NGISVVNWPLRRLMLSYFANWYTRLITGLRIMDCTSGFKCFRRRVIESIDMSTIRSDGYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCEE
FQIEMNYRCVEKGFQVREIPIIFIDRRSGSSKMSKKIVREAVFMVWKLKLGSVFGALFR
EEEEECHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTVVVIPTYNERDTIERLINDVLAQDKDIHVLVVDDNSPDGTGEIVDRLSEGKGRVHVL
CCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEE
HRPGKMGLGSAYRQGFAAALAMDADFIVEMDADYSHDPATLPRFLEAMEGCDLVIGSRYL
ECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEECHHHH
NGISVVNWPLRRLMLSYFANWYTRLITGLRIMDCTSGFKCFRRRVIESIDMSTIRSDGYS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCEE
FQIEMNYRCVEKGFQVREIPIIFIDRRSGSSKMSKKIVREAVFMVWKLKLGSVFGALFR
EEEEECHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]