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The map label for this gene is 39996879

Identifier: 39996879

GI number: 39996879

Start: 1943910

End: 1944455

Strand: Reverse

Name: 39996879

Synonym: GSU1780

Alternate gene names: NA

Gene position: 1944455-1943910 (Counterclockwise)

Preceding gene: 39996880

Following gene: 39996878

Centisome position: 50.98

GC content: 54.58

Gene sequence:

>546_bases
ATGACGAAGCAGCAACTCATACAACTTATTACGTCCAGGAAGCGGACTGTGGTCGTCCTTCTTGCCTTGGCAACGGTGAA
TATCATCCTGGCGGTGTTCAAAGGCGTGTATCAAGAGCCGCGCATTGCCGAGCTGAGGGATGAGTGGACATCCAAGAGGT
CGCTCAATACGGGTGCCAGGCGTGATGTATCCTCCATCTACCGGCAAGGGACAGAAGATCTGAAGGTGTACCGCGAGCGC
CTTACCCCCAAACGGGGGTTCACCGCCCTCATGATGGAAGTTTTTGAAACCGCTGCTGACAACGGGCTCACGGTCAAGGG
CGTCACATACAAGCCGAAGCAGGTGCCGGATCAAAAACTCGTGGTATATGATGTGGTCCTCTCTCTTGGAGGTACCTACG
CCGGTATCAAGAGCTTCCTCTCTGATCTCCAGTGTCACAGGTCAATGCTTGTGGTTGAATCTCTTTCCCTCAACAGCGGC
AGTGCCGTGGAGGAGGCGGTTGCACTGAAAGTTCAGCTTACTGCCTACCTCCGGACGGAGGAGTGA

Upstream 100 bases:

>100_bases
CCCACTTTACCGATGTTCTCCTGTTGAATCAGGGACAGCTCAGTGTCGGAGAAAAGCAGAAGGGTATTTCCTTTACCGTC
ACCTGCAAGGTCGACTTTAC

Downstream 100 bases:

>100_bases
TGAACCGTCAACGGCTCATACTGGCAATTCTCCTGGTCGTACTGGGTCTGTCCCTGATTTACAGCTACGTCAGGTCGCCC
CGCCAGCAAACCGTTACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Secretion System Protein PulO

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MTKQQLIQLITSRKRTVVVLLALATVNIILAVFKGVYQEPRIAELRDEWTSKRSLNTGARRDVSSIYRQGTEDLKVYRER
LTPKRGFTALMMEVFETAADNGLTVKGVTYKPKQVPDQKLVVYDVVLSLGGTYAGIKSFLSDLQCHRSMLVVESLSLNSG
SAVEEAVALKVQLTAYLRTEE

Sequences:

>Translated_181_residues
MTKQQLIQLITSRKRTVVVLLALATVNIILAVFKGVYQEPRIAELRDEWTSKRSLNTGARRDVSSIYRQGTEDLKVYRER
LTPKRGFTALMMEVFETAADNGLTVKGVTYKPKQVPDQKLVVYDVVLSLGGTYAGIKSFLSDLQCHRSMLVVESLSLNSG
SAVEEAVALKVQLTAYLRTEE
>Mature_180_residues
TKQQLIQLITSRKRTVVVLLALATVNIILAVFKGVYQEPRIAELRDEWTSKRSLNTGARRDVSSIYRQGTEDLKVYRERL
TPKRGFTALMMEVFETAADNGLTVKGVTYKPKQVPDQKLVVYDVVLSLGGTYAGIKSFLSDLQCHRSMLVVESLSLNSGS
AVEEAVALKVQLTAYLRTEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20242; Mature: 20111

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKQQLIQLITSRKRTVVVLLALATVNIILAVFKGVYQEPRIAELRDEWTSKRSLNTGAR
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH
RDVSSIYRQGTEDLKVYRERLTPKRGFTALMMEVFETAADNGLTVKGVTYKPKQVPDQKL
HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHH
VVYDVVLSLGGTYAGIKSFLSDLQCHRSMLVVESLSLNSGSAVEEAVALKVQLTAYLRTE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECC
E
C
>Mature Secondary Structure 
TKQQLIQLITSRKRTVVVLLALATVNIILAVFKGVYQEPRIAELRDEWTSKRSLNTGAR
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHH
RDVSSIYRQGTEDLKVYRERLTPKRGFTALMMEVFETAADNGLTVKGVTYKPKQVPDQKL
HHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHH
VVYDVVLSLGGTYAGIKSFLSDLQCHRSMLVVESLSLNSGSAVEEAVALKVQLTAYLRTE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA