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The map label for this gene is 39996880

Identifier: 39996880

GI number: 39996880

Start: 1944452

End: 1944991

Strand: Reverse

Name: 39996880

Synonym: GSU1781

Alternate gene names: NA

Gene position: 1944991-1944452 (Counterclockwise)

Preceding gene: 39996881

Following gene: 39996879

Centisome position: 50.99

GC content: 52.41

Gene sequence:

>540_bases
ATGGATATCCGGATAAACCTTGCCACCCGCTATTTCTATAACACAAGGAAGGTGAACACGGCGATTGCCGCAGTGATCCT
GGGGCTTCTTCTTCTACTGGCGTACAACATCGCATCGCTTGTGGCGAATGTTTCCACGGAGCGGGCGCTCAAGAAGGACA
TGGGGATTTTGCAGGCCCGTTTTGATGAGTCTGCCAAAGGAATTACCGAAAAGCAGTATCGGGATCTGCTCAAGAAGATT
GCCGAAGTCAACGCCGTAATCGGCAAAAAGGCCTTTGACTGGTTGCTTCTTCTGAACCGCCTTGAAGAAGTAGTGCCCGA
GGGGGTTGCACTCGGGGCCATAGATCCCAGCCTGAAGGACGGAACCCTTAAACTTTCCGGTGCTGCCCGCTCGTTCGGCG
CACTCAGGTCGCTGATGGAGAACCTGGAGTCATCAACCCACTTTACCGATGTTCTCCTGTTGAATCAGGGACAGCTCAGT
GTCGGAGAAAAGCAGAAGGGTATTTCCTTTACCGTCACCTGCAAGGTCGACTTTACATGA

Upstream 100 bases:

>100_bases
TCAATCCGCAGGCGGTCATGGGCAATAACGGGACAGCGACCGACCCAGCGTTACTCCATGACTTGGCGGCAGCCATTGGC
GCGGCCACGAGGAATCTTTG

Downstream 100 bases:

>100_bases
CGAAGCAGCAACTCATACAACTTATTACGTCCAGGAAGCGGACTGTGGTCGTCCTTCTTGCCTTGGCAACGGTGAATATC
ATCCTGGCGGTGTTCAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Fimbrial Assembly; Type II Secretion System Protein PulN

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MDIRINLATRYFYNTRKVNTAIAAVILGLLLLLAYNIASLVANVSTERALKKDMGILQARFDESAKGITEKQYRDLLKKI
AEVNAVIGKKAFDWLLLLNRLEEVVPEGVALGAIDPSLKDGTLKLSGAARSFGALRSLMENLESSTHFTDVLLLNQGQLS
VGEKQKGISFTVTCKVDFT

Sequences:

>Translated_179_residues
MDIRINLATRYFYNTRKVNTAIAAVILGLLLLLAYNIASLVANVSTERALKKDMGILQARFDESAKGITEKQYRDLLKKI
AEVNAVIGKKAFDWLLLLNRLEEVVPEGVALGAIDPSLKDGTLKLSGAARSFGALRSLMENLESSTHFTDVLLLNQGQLS
VGEKQKGISFTVTCKVDFT
>Mature_179_residues
MDIRINLATRYFYNTRKVNTAIAAVILGLLLLLAYNIASLVANVSTERALKKDMGILQARFDESAKGITEKQYRDLLKKI
AEVNAVIGKKAFDWLLLLNRLEEVVPEGVALGAIDPSLKDGTLKLSGAARSFGALRSLMENLESSTHFTDVLLLNQGQLS
VGEKQKGISFTVTCKVDFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19646; Mature: 19646

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRINLATRYFYNTRKVNTAIAAVILGLLLLLAYNIASLVANVSTERALKKDMGILQAR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDESAKGITEKQYRDLLKKIAEVNAVIGKKAFDWLLLLNRLEEVVPEGVALGAIDPSLKD
HCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
GTLKLSGAARSFGALRSLMENLESSTHFTDVLLLNQGQLSVGEKQKGISFTVTCKVDFT
CEEEECCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MDIRINLATRYFYNTRKVNTAIAAVILGLLLLLAYNIASLVANVSTERALKKDMGILQAR
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDESAKGITEKQYRDLLKKIAEVNAVIGKKAFDWLLLLNRLEEVVPEGVALGAIDPSLKD
HCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
GTLKLSGAARSFGALRSLMENLESSTHFTDVLLLNQGQLSVGEKQKGISFTVTCKVDFT
CEEEECCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA