| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996869
Identifier: 39996869
GI number: 39996869
Start: 1933128
End: 1934486
Strand: Reverse
Name: 39996869
Synonym: GSU1770
Alternate gene names: NA
Gene position: 1934486-1933128 (Counterclockwise)
Preceding gene: 39996870
Following gene: 39996868
Centisome position: 50.72
GC content: 58.06
Gene sequence:
>1359_bases ATGAAGAAGCCCGCAATTCTCGGCGTTCTTACCAGTGCGTTTTTCGTCCTTGTTGTCAATACGTTTGCGTTCGGCGCCGG CGGCAGCCTTTCAGCGTATCCATCGGGAAACGATGTGCTGATCTCCGCCACAGGGTTGTCCAATGTAGATGCAATAGACA TAACCGTGACCTATGACCCACAAGCGTTGAGTAACGCCCAAGCAATGCAGCTCAGCGGATTCCGCTGGGCTATGTTTCTC CCCAATGCAGCCACTGCCGGCACCATTCGTCTTGCCATGCTTAACACTGCGCCATTGTCCGGTTCAGGTCCGCTCGCAAA GATAAGCTTTTCACAGGGGGGGAAGGGGGCAACCGGGGTAACTATCGTTTACCAGATTATTAGTGGGGATACTTCCCAGA AGGGGAACCTCAGAGTTACCCTCAATAGCGGGACAACCCAATCCACTGAGCCCTCCACGTCGCAACCGACAGAGTCTCCC GTAAATACGGGTCAGGGAGAGAACCTTGCAGACGGTTCAGGTGCTTCCGCAATGGATGGAACTGCTCAGACGCCTTCAGC CGGCGCAACGTCGGGTGACGCTACCCATCGAGGAACCGTCGTATTGCCAGGGATGATAACGTCTGGGGCTGTTGATAACG ATGCGAGTGTTTCAGCAGGGAAGCCGCCTGTCGCGGAGCAGACCGCGTCGGCTGAAGAGTCTCCACAGTCGCAAGCGAAC GGCGCGAACGAGACCGAAGAACAGCACGCTCCGCTCCCGGAAGCCGAGCGGCCGGTTTCTGAGCCGGAAGAGAAACCCGC ACCTGTGACGCAGGAAGGGTATGCCGTCCTTGGCGGCGTGGCTGCCCGGTTCCGCGACTACACGGGGGCCAAAACCCCCA AGGCACTCATGGCACTGTTCAAGAAACCCGTGGCGGATAGCATCAGCCAGGACCCGGCTATCTGCCTTACTGACGGCAAA ACAGCCGTTCGCATCACCGTGAATCTTGCCGAAGGAGGGAAGACCGCGCCCAACTTCGCACTGAGAGGCGCGGCGCTCAA GTCGCTTAAAAAGGGGGAGGGAAACCGCTGGCTGGTGGAAGCGCTGCCGGAGGCCGGTGCCGTGGAAGCAACCCTCATTA TCGTAACCGGCCGGAAAATCATGGAGTATCCGCTCACCGTCGCACCGCGGGCAGACGTCAACGTGGACGGCAAGGGACGC GTGACAGAGGCAGATTTCCTGCTTTTCCTCGCCCGGAAATCGGTTGGACCGGCCCGCCCATTTGATCTGAACGGCGACGG CAAGGTCGACTATCTCGATGATTACATTTATACGGCTAACTATCTTACGGCCGCGGATGAGAAAAAAACGCGGAACTAG
Upstream 100 bases:
>100_bases TGTGTACTGGACTGTGCAGATTTTATGGAAAGCTGTTGGGCTGTTTTGTGGTACGATGACACATATATATGACCTTACCT CCTGATTATGAGGAATCGCA
Downstream 100 bases:
>100_bases AGCGTAATCCCCATGCTTCAGCAAAGCCCGTCGTGAGCTGTCCGACGGGCTTTGCTCGTTCGTCAGGATACGGTTTGCCC CCCGACTGAGCTATGGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKKPAILGVLTSAFFVLVVNTFAFGAGGSLSAYPSGNDVLISATGLSNVDAIDITVTYDPQALSNAQAMQLSGFRWAMFL PNAATAGTIRLAMLNTAPLSGSGPLAKISFSQGGKGATGVTIVYQIISGDTSQKGNLRVTLNSGTTQSTEPSTSQPTESP VNTGQGENLADGSGASAMDGTAQTPSAGATSGDATHRGTVVLPGMITSGAVDNDASVSAGKPPVAEQTASAEESPQSQAN GANETEEQHAPLPEAERPVSEPEEKPAPVTQEGYAVLGGVAARFRDYTGAKTPKALMALFKKPVADSISQDPAICLTDGK TAVRITVNLAEGGKTAPNFALRGAALKSLKKGEGNRWLVEALPEAGAVEATLIIVTGRKIMEYPLTVAPRADVNVDGKGR VTEADFLLFLARKSVGPARPFDLNGDGKVDYLDDYIYTANYLTAADEKKTRN
Sequences:
>Translated_452_residues MKKPAILGVLTSAFFVLVVNTFAFGAGGSLSAYPSGNDVLISATGLSNVDAIDITVTYDPQALSNAQAMQLSGFRWAMFL PNAATAGTIRLAMLNTAPLSGSGPLAKISFSQGGKGATGVTIVYQIISGDTSQKGNLRVTLNSGTTQSTEPSTSQPTESP VNTGQGENLADGSGASAMDGTAQTPSAGATSGDATHRGTVVLPGMITSGAVDNDASVSAGKPPVAEQTASAEESPQSQAN GANETEEQHAPLPEAERPVSEPEEKPAPVTQEGYAVLGGVAARFRDYTGAKTPKALMALFKKPVADSISQDPAICLTDGK TAVRITVNLAEGGKTAPNFALRGAALKSLKKGEGNRWLVEALPEAGAVEATLIIVTGRKIMEYPLTVAPRADVNVDGKGR VTEADFLLFLARKSVGPARPFDLNGDGKVDYLDDYIYTANYLTAADEKKTRN >Mature_452_residues MKKPAILGVLTSAFFVLVVNTFAFGAGGSLSAYPSGNDVLISATGLSNVDAIDITVTYDPQALSNAQAMQLSGFRWAMFL PNAATAGTIRLAMLNTAPLSGSGPLAKISFSQGGKGATGVTIVYQIISGDTSQKGNLRVTLNSGTTQSTEPSTSQPTESP VNTGQGENLADGSGASAMDGTAQTPSAGATSGDATHRGTVVLPGMITSGAVDNDASVSAGKPPVAEQTASAEESPQSQAN GANETEEQHAPLPEAERPVSEPEEKPAPVTQEGYAVLGGVAARFRDYTGAKTPKALMALFKKPVADSISQDPAICLTDGK TAVRITVNLAEGGKTAPNFALRGAALKSLKKGEGNRWLVEALPEAGAVEATLIIVTGRKIMEYPLTVAPRADVNVDGKGR VTEADFLLFLARKSVGPARPFDLNGDGKVDYLDDYIYTANYLTAADEKKTRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46653; Mature: 46653
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKPAILGVLTSAFFVLVVNTFAFGAGGSLSAYPSGNDVLISATGLSNVDAIDITVTYDP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCEEEEEEEEECC QALSNAQAMQLSGFRWAMFLPNAATAGTIRLAMLNTAPLSGSGPLAKISFSQGGKGATGV HHHCCCCEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCE TIVYQIISGDTSQKGNLRVTLNSGTTQSTEPSTSQPTESPVNTGQGENLADGSGASAMDG EEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAQTPSAGATSGDATHRGTVVLPGMITSGAVDNDASVSAGKPPVAEQTASAEESPQSQAN CCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCC GANETEEQHAPLPEAERPVSEPEEKPAPVTQEGYAVLGGVAARFRDYTGAKTPKALMALF CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH KKPVADSISQDPAICLTDGKTAVRITVNLAEGGKTAPNFALRGAALKSLKKGEGNRWLVE HHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE ALPEAGAVEATLIIVTGRKIMEYPLTVAPRADVNVDGKGRVTEADFLLFLARKSVGPARP ECCCCCCEEEEEEEEECCHHHHCCCEECCCCCCCCCCCCCEEHHHHEEEEHHHCCCCCCC FDLNGDGKVDYLDDYIYTANYLTAADEKKTRN CCCCCCCCEEEECCEEEECCEEEECCHHCCCC >Mature Secondary Structure MKKPAILGVLTSAFFVLVVNTFAFGAGGSLSAYPSGNDVLISATGLSNVDAIDITVTYDP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCEEEEEECCCCCCEEEEEEEEECC QALSNAQAMQLSGFRWAMFLPNAATAGTIRLAMLNTAPLSGSGPLAKISFSQGGKGATGV HHHCCCCEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCE TIVYQIISGDTSQKGNLRVTLNSGTTQSTEPSTSQPTESPVNTGQGENLADGSGASAMDG EEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAQTPSAGATSGDATHRGTVVLPGMITSGAVDNDASVSAGKPPVAEQTASAEESPQSQAN CCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCC GANETEEQHAPLPEAERPVSEPEEKPAPVTQEGYAVLGGVAARFRDYTGAKTPKALMALF CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHH KKPVADSISQDPAICLTDGKTAVRITVNLAEGGKTAPNFALRGAALKSLKKGEGNRWLVE HHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE ALPEAGAVEATLIIVTGRKIMEYPLTVAPRADVNVDGKGRVTEADFLLFLARKSVGPARP ECCCCCCEEEEEEEEECCHHHHCCCEECCCCCCCCCCCCCEEHHHHEEEEHHHCCCCCCC FDLNGDGKVDYLDDYIYTANYLTAADEKKTRN CCCCCCCCEEEECCEEEECCEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA