| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is yqeW [H]
Identifier: 39996841
GI number: 39996841
Start: 1906918
End: 1908549
Strand: Reverse
Name: yqeW [H]
Synonym: GSU1742
Alternate gene names: 39996841
Gene position: 1908549-1906918 (Counterclockwise)
Preceding gene: 39996842
Following gene: 39996840
Centisome position: 50.04
GC content: 59.25
Gene sequence:
>1632_bases ATGCAGTACCTCTCCATCCTAGAAGCCCTGGGCGGGCTCGGCGTTTTCATCCTCGGCATGAAGACCATGTCCGAGGGACT CCAGAAGATTGCCGGCGACCGGTTTAGGCGCCACCTGGAGCGCATTGCCGGAAACCGACTGACCGCAGCCCTTCTCGGCA GCACCCTGTCGTCGCTCCTCCAGTCGTCCAGCGCCGCGTGCATCATCACGGTCGGCTTCATCAACGCGGGGCTCATTTCT CTCTACCAGGCCCTGGGCATTCTCCTGGGAACCGGCATCGGCACGACCCTGGCCGTCCAGTTCATTGCCTTCAAGATCAG CTCCTTTGCCCTTCCGGCCGTTTTCGTCGGAGTCTGCCTGCGTTGCTTTCTCCGCAGGCGGAGGTGGGTGAACGCCGGTG AGCTCATCCTGGGCGCCGGCCTCCTGTTCCTCGGGCTTCGCATCATGGAGTCGAATCTCCAGCCCCTTCAGGAATACGCC ATTGTGTTCACCCACCAGGACATGTTCGTTTCCAAGCGGATTGCCGCTGTTCTGTTCGGTGCGACGCTCACCTTGCTCGT TCAGTCTGGTAGTACCGCCATCGCCGTGATCATGGCACTGGCGGGGAGCAGCCTGGTATCCTTTGAAACCGGAGCCGCCA TGGTGATCGGTGAACTCCTCGGCACCTCTGTCATCACCGCCTTTGCCTCGATCGGGGGAACGCTTGAAGCGAAGCGGACG GTCTTTTTCTACTTCATGGTGAACCTTCTTGCCGTCGTGGTCGTGATGCTGGTGTTCCCCTCCTACCTTTCCTTTGTCAC CTACATTTCTCCGGAGGATATCGCATCGTCCGCCGGCATCTCCCGGGTCCTGGCCAATACCCACACCCTGTTCAGCATCA TGAGCGCGGTGATTTTCCTGCCGCTTATCGGCTTTTTCGCGCGCACCGCCCCGCGCATCATTCCCGGCAGCGAGAGGGCT TCCAGCGTGGAGGCGCGCACCGTGTTCATCGACCCGCGAGTGCTCAATACACCTCCGATTGCGTTGCTGCAGGCACGCAG CGAGTTGAGGCGCATGGCTGGCATCTCCCTGACCATGTATTCTGAAATGGTCGAGCAGTTTTTCCGTTATGATGCCCGAA AGGCTGTGGGCATCCGCCAGAAGGAGAACGCGGTCGATATCCTTCAGCGGGATCTGACCGATTTTCTCGTGTCGTTGTCG CGGCGTGAACTCGCGCCCGAGGCATCAATGGAAATCCCGGTCATGCTCCAGTTGATCGGTGAACTGGAACATGTGGCGGA CCAGAGCGAGGCGGTCCTTGACTATCTGAGGCGCAAAAAGGAGGAAAAGCTCCTCTTTTCCAACGCCGCCATGACCGAGA TCAGGCACCTTGCCCGGACGGTGGAAAAGCTCGTTGACCTTGCGGTCGAGACCATGGATAATCCGCCGCCCGATGCCGTT GAGCAGGGCCGGTCGCTGCGCGATGACGTGGGTCGGCAGCGTGAGGCAATGCTCGACGGACACATCAAGCGCCTCTCTGC AGGCAAATGCTCCGTTCGTGCAGGAATCATCTACGCTGATATGATTACGGCCTTTGTCAAAATCGCCGATTCAAGTGTCA CCATCATTGAAACCAGGAAGGAGTTCACCTGA
Upstream 100 bases:
>100_bases AAGTTAAACTCCTTATCTACCGCAGCGGCAGCTCGAAGTCGGTAGCGCCCGATTTTCTCTTCCCCTTCGCGGTCGGCAAG TAGCCTCCGCCATCGGACCA
Downstream 100 bases:
>100_bases TGTCGTTCCCTGCAGCCTCCATCGATCTTGGCACCAATACGGCCCGGCTTCTGATCGGATCAGTAGAGGCGGGCCGGATC GAGCACCTGCTCGTAAAGCG
Product: Na/Pi-cotransporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MQYLSILEALGGLGVFILGMKTMSEGLQKIAGDRFRRHLERIAGNRLTAALLGSTLSSLLQSSSAACIITVGFINAGLIS LYQALGILLGTGIGTTLAVQFIAFKISSFALPAVFVGVCLRCFLRRRRWVNAGELILGAGLLFLGLRIMESNLQPLQEYA IVFTHQDMFVSKRIAAVLFGATLTLLVQSGSTAIAVIMALAGSSLVSFETGAAMVIGELLGTSVITAFASIGGTLEAKRT VFFYFMVNLLAVVVVMLVFPSYLSFVTYISPEDIASSAGISRVLANTHTLFSIMSAVIFLPLIGFFARTAPRIIPGSERA SSVEARTVFIDPRVLNTPPIALLQARSELRRMAGISLTMYSEMVEQFFRYDARKAVGIRQKENAVDILQRDLTDFLVSLS RRELAPEASMEIPVMLQLIGELEHVADQSEAVLDYLRRKKEEKLLFSNAAMTEIRHLARTVEKLVDLAVETMDNPPPDAV EQGRSLRDDVGRQREAMLDGHIKRLSAGKCSVRAGIIYADMITAFVKIADSSVTIIETRKEFT
Sequences:
>Translated_543_residues MQYLSILEALGGLGVFILGMKTMSEGLQKIAGDRFRRHLERIAGNRLTAALLGSTLSSLLQSSSAACIITVGFINAGLIS LYQALGILLGTGIGTTLAVQFIAFKISSFALPAVFVGVCLRCFLRRRRWVNAGELILGAGLLFLGLRIMESNLQPLQEYA IVFTHQDMFVSKRIAAVLFGATLTLLVQSGSTAIAVIMALAGSSLVSFETGAAMVIGELLGTSVITAFASIGGTLEAKRT VFFYFMVNLLAVVVVMLVFPSYLSFVTYISPEDIASSAGISRVLANTHTLFSIMSAVIFLPLIGFFARTAPRIIPGSERA SSVEARTVFIDPRVLNTPPIALLQARSELRRMAGISLTMYSEMVEQFFRYDARKAVGIRQKENAVDILQRDLTDFLVSLS RRELAPEASMEIPVMLQLIGELEHVADQSEAVLDYLRRKKEEKLLFSNAAMTEIRHLARTVEKLVDLAVETMDNPPPDAV EQGRSLRDDVGRQREAMLDGHIKRLSAGKCSVRAGIIYADMITAFVKIADSSVTIIETRKEFT >Mature_543_residues MQYLSILEALGGLGVFILGMKTMSEGLQKIAGDRFRRHLERIAGNRLTAALLGSTLSSLLQSSSAACIITVGFINAGLIS LYQALGILLGTGIGTTLAVQFIAFKISSFALPAVFVGVCLRCFLRRRRWVNAGELILGAGLLFLGLRIMESNLQPLQEYA IVFTHQDMFVSKRIAAVLFGATLTLLVQSGSTAIAVIMALAGSSLVSFETGAAMVIGELLGTSVITAFASIGGTLEAKRT VFFYFMVNLLAVVVVMLVFPSYLSFVTYISPEDIASSAGISRVLANTHTLFSIMSAVIFLPLIGFFARTAPRIIPGSERA SSVEARTVFIDPRVLNTPPIALLQARSELRRMAGISLTMYSEMVEQFFRYDARKAVGIRQKENAVDILQRDLTDFLVSLS RRELAPEASMEIPVMLQLIGELEHVADQSEAVLDYLRRKKEEKLLFSNAAMTEIRHLARTVEKLVDLAVETMDNPPPDAV EQGRSLRDDVGRQREAMLDGHIKRLSAGKCSVRAGIIYADMITAFVKIADSSVTIIETRKEFT
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=430, Percent_Identity=23.0232558139535, Blast_Score=93, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59264; Mature: 59264
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYLSILEALGGLGVFILGMKTMSEGLQKIAGDRFRRHLERIAGNRLTAALLGSTLSSLL CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QSSSAACIITVGFINAGLISLYQALGILLGTGIGTTLAVQFIAFKISSFALPAVFVGVCL HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RCFLRRRRWVNAGELILGAGLLFLGLRIMESNLQPLQEYAIVFTHQDMFVSKRIAAVLFG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH ATLTLLVQSGSTAIAVIMALAGSSLVSFETGAAMVIGELLGTSVITAFASIGGTLEAKRT HHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VFFYFMVNLLAVVVVMLVFPSYLSFVTYISPEDIASSAGISRVLANTHTLFSIMSAVIFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIGFFARTAPRIIPGSERASSVEARTVFIDPRVLNTPPIALLQARSELRRMAGISLTMY HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHHHCCHHHHH SEMVEQFFRYDARKAVGIRQKENAVDILQRDLTDFLVSLSRRELAPEASMEIPVMLQLIG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELEHVADQSEAVLDYLRRKKEEKLLFSNAAMTEIRHLARTVEKLVDLAVETMDNPPPDAV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EQGRSLRDDVGRQREAMLDGHIKRLSAGKCSVRAGIIYADMITAFVKIADSSVTIIETRK HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC EFT CCC >Mature Secondary Structure MQYLSILEALGGLGVFILGMKTMSEGLQKIAGDRFRRHLERIAGNRLTAALLGSTLSSLL CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QSSSAACIITVGFINAGLISLYQALGILLGTGIGTTLAVQFIAFKISSFALPAVFVGVCL HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RCFLRRRRWVNAGELILGAGLLFLGLRIMESNLQPLQEYAIVFTHQDMFVSKRIAAVLFG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH ATLTLLVQSGSTAIAVIMALAGSSLVSFETGAAMVIGELLGTSVITAFASIGGTLEAKRT HHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH VFFYFMVNLLAVVVVMLVFPSYLSFVTYISPEDIASSAGISRVLANTHTLFSIMSAVIFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIGFFARTAPRIIPGSERASSVEARTVFIDPRVLNTPPIALLQARSELRRMAGISLTMY HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEECCCCCHHHHHHHHHHHHHHCCHHHHH SEMVEQFFRYDARKAVGIRQKENAVDILQRDLTDFLVSLSRRELAPEASMEIPVMLQLIG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELEHVADQSEAVLDYLRRKKEEKLLFSNAAMTEIRHLARTVEKLVDLAVETMDNPPPDAV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH EQGRSLRDDVGRQREAMLDGHIKRLSAGKCSVRAGIIYADMITAFVKIADSSVTIIETRK HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC EFT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]