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The map label for this gene is 39996842

Identifier: 39996842

GI number: 39996842

Start: 1908567

End: 1909208

Strand: Reverse

Name: 39996842

Synonym: GSU1743

Alternate gene names: NA

Gene position: 1909208-1908567 (Counterclockwise)

Preceding gene: 39996843

Following gene: 39996841

Centisome position: 50.06

GC content: 55.61

Gene sequence:

>642_bases
ATGAAAGCCCACGTTTACGCGTTGCTCATTACCATAGTGTTTCTTGCCGGCTGCAGCGGCATCAAAGTCGTTCCCCTGCA
GGTCCCGCAGGGAGTCGTGAACCTCTCCGACAACTCCCAGACCGTCACCAAAGACGGCGTATCCATTACTGTGGCAAATT
CCAACACGGAAATGGTCTCCTACAATCTTGACGGCACAGTGACCGCCTTCGTGGTCACCATTGATAACCAATCCTCGCGG
GAAATCGGTTTCGACACGGGTTCCTTCCTGTTGCTGGACGGAGAGAATCGCCAGTACCTCCCTCTGACGCCCGAGCAGGT
CAAGGAGCTGATGAGCCGAGATTCCTACTACCTCATCCCATATCCCTACGTCGGGTTCTATTACCTGGAAGACTACGAAA
GGACCTCCTTCTACAACACCACTGAGTCGCAGCTTCCCTACTACTACGAAGTCTATCCCCAGGACATCCAGACTCGCGCG
CTGGCGGCCAACCCGGTGATCCCCGGAGCAAAGTCGACCGGTCTCGTCTATTTCCGGATCGATCTCGGGGCGGTTAAGGA
AGTTAAACTCCTTATCTACCGCAGCGGCAGCTCGAAGTCGGTAGCGCCCGATTTTCTCTTCCCCTTCGCGGTCGGCAAGT
AG

Upstream 100 bases:

>100_bases
ACAATCGGGTATCCATTCTCAGCCGGCAATCTCGCAGGGACAGCCGGGCCGAAACATGCTACACTCTTTCCTGTTCGCCA
GCCATTCAGGGGGTCCTGCC

Downstream 100 bases:

>100_bases
CCTCCGCCATCGGACCAATGCAGTACCTCTCCATCCTAGAAGCCCTGGGCGGGCTCGGCGTTTTCATCCTCGGCATGAAG
ACCATGTCCGAGGGACTCCA

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKAHVYALLITIVFLAGCSGIKVVPLQVPQGVVNLSDNSQTVTKDGVSITVANSNTEMVSYNLDGTVTAFVVTIDNQSSR
EIGFDTGSFLLLDGENRQYLPLTPEQVKELMSRDSYYLIPYPYVGFYYLEDYERTSFYNTTESQLPYYYEVYPQDIQTRA
LAANPVIPGAKSTGLVYFRIDLGAVKEVKLLIYRSGSSKSVAPDFLFPFAVGK

Sequences:

>Translated_213_residues
MKAHVYALLITIVFLAGCSGIKVVPLQVPQGVVNLSDNSQTVTKDGVSITVANSNTEMVSYNLDGTVTAFVVTIDNQSSR
EIGFDTGSFLLLDGENRQYLPLTPEQVKELMSRDSYYLIPYPYVGFYYLEDYERTSFYNTTESQLPYYYEVYPQDIQTRA
LAANPVIPGAKSTGLVYFRIDLGAVKEVKLLIYRSGSSKSVAPDFLFPFAVGK
>Mature_213_residues
MKAHVYALLITIVFLAGCSGIKVVPLQVPQGVVNLSDNSQTVTKDGVSITVANSNTEMVSYNLDGTVTAFVVTIDNQSSR
EIGFDTGSFLLLDGENRQYLPLTPEQVKELMSRDSYYLIPYPYVGFYYLEDYERTSFYNTTESQLPYYYEVYPQDIQTRA
LAANPVIPGAKSTGLVYFRIDLGAVKEVKLLIYRSGSSKSVAPDFLFPFAVGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23684; Mature: 23684

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHVYALLITIVFLAGCSGIKVVPLQVPQGVVNLSDNSQTVTKDGVSITVANSNTEMVS
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEEEECCEEEEEECCCCEEEE
YNLDGTVTAFVVTIDNQSSREIGFDTGSFLLLDGENRQYLPLTPEQVKELMSRDSYYLIP
EECCCEEEEEEEEECCCCCCEECCCCCCEEEEECCCCEECCCCHHHHHHHHCCCCEEEEE
YPYVGFYYLEDYERTSFYNTTESQLPYYYEVYPQDIQTRALAANPVIPGAKSTGLVYFRI
CCCCEEEEEECCCCCCEECCCHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEE
DLGAVKEVKLLIYRSGSSKSVAPDFLFPFAVGK
ECCCCCEEEEEEEECCCCCCCCCCEECEEECCC
>Mature Secondary Structure
MKAHVYALLITIVFLAGCSGIKVVPLQVPQGVVNLSDNSQTVTKDGVSITVANSNTEMVS
CCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEEEECCEEEEEECCCCEEEE
YNLDGTVTAFVVTIDNQSSREIGFDTGSFLLLDGENRQYLPLTPEQVKELMSRDSYYLIP
EECCCEEEEEEEEECCCCCCEECCCCCCEEEEECCCCEECCCCHHHHHHHHCCCCEEEEE
YPYVGFYYLEDYERTSFYNTTESQLPYYYEVYPQDIQTRALAANPVIPGAKSTGLVYFRI
CCCCEEEEEECCCCCCEECCCHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEE
DLGAVKEVKLLIYRSGSSKSVAPDFLFPFAVGK
ECCCCCEEEEEEEECCCCCCCCCCEECEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA