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The map label for this gene is petC [H]

Identifier: 39996750

GI number: 39996750

Start: 1808325

End: 1808744

Strand: Reverse

Name: petC [H]

Synonym: GSU1650

Alternate gene names: 39996750

Gene position: 1808744-1808325 (Counterclockwise)

Preceding gene: 39996754

Following gene: 39996749

Centisome position: 47.42

GC content: 62.38

Gene sequence:

>420_bases
ATGCAGGCCAGCACGAGACGAACGTTTCTCGGATATTGCCTCGGCGCCATCGCCCTTGCAGGTGGTGCGGCGGCAACCTA
CCCCGTGTTTCGCTATCTCGCCCCGCAGGGTGAGAGCAACAGTGGCAGCAAGGTGACCTTCCCCGAAACGGAAATCCCGC
CCGATGGGGCAAAATTCTTCGATTTCCACGGCACTACCGGCGTCGTTGTCAAAACGCGGGCCGGCGGTCTGATGGCCCTG
TCCGCCGTCTGTACCCACCTGGGGTGCATCGTCCAGTGGGAGAAGGAGAAGCAGGACTTTCTCTGCCCCTGCCATGGCGG
CCGTTTCAGTGCCGATGGATCAGTCCTTTCGGGACCTCCGCCCAAGCCGCTCGCCCGGCTTCCTCTCGCCGTGGAAAACG
GCATCGTTACCATCGGATAG

Upstream 100 bases:

>100_bases
GATTGTGCGAGGACCTGCATGCCGTGACGGCGCGAGGCGTACCCTCACCGCTCTGGTTGCACCAAGCTCTAAAACGCGAA
ACTGATCTGATGGAGGTCCC

Downstream 100 bases:

>100_bases
GAGGCCACATGTCTCTGCCGGATAAACTCCGAGAATGGTTCGAAGTGCGCCTCGGTATAGCAGAACTGGTTGAGAAACGC
CTGACCGGCTATCTGCTGCC

Product: cytochrome b/b6 complex, iron-sulfur subunit

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQASTRRTFLGYCLGAIALAGGAAATYPVFRYLAPQGESNSGSKVTFPETEIPPDGAKFFDFHGTTGVVVKTRAGGLMAL
SAVCTHLGCIVQWEKEKQDFLCPCHGGRFSADGSVLSGPPPKPLARLPLAVENGIVTIG

Sequences:

>Translated_139_residues
MQASTRRTFLGYCLGAIALAGGAAATYPVFRYLAPQGESNSGSKVTFPETEIPPDGAKFFDFHGTTGVVVKTRAGGLMAL
SAVCTHLGCIVQWEKEKQDFLCPCHGGRFSADGSVLSGPPPKPLARLPLAVENGIVTIG
>Mature_139_residues
MQASTRRTFLGYCLGAIALAGGAAATYPVFRYLAPQGESNSGSKVTFPETEIPPDGAKFFDFHGTTGVVVKTRAGGLMAL
SAVCTHLGCIVQWEKEKQDFLCPCHGGRFSADGSVLSGPPPKPLARLPLAVENGIVTIG

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 14527; Mature: 14527

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASTRRTFLGYCLGAIALAGGAAATYPVFRYLAPQGESNSGSKVTFPETEIPPDGAKFF
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEE
DFHGTTGVVVKTRAGGLMALSAVCTHLGCIVQWEKEKQDFLCPCHGGRFSADGSVLSGPP
EECCCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCCEECCCCCCEECCCCCCCCCCC
PKPLARLPLAVENGIVTIG
CCCHHHCCEEECCCEEEEC
>Mature Secondary Structure
MQASTRRTFLGYCLGAIALAGGAAATYPVFRYLAPQGESNSGSKVTFPETEIPPDGAKFF
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEE
DFHGTTGVVVKTRAGGLMALSAVCTHLGCIVQWEKEKQDFLCPCHGGRFSADGSVLSGPP
EECCCCEEEEEECCCCHHHHHHHHHHHHEEEEECCCCCCEECCCCCCEECCCCCCCCCCC
PKPLARLPLAVENGIVTIG
CCCHHHCCEEECCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]