| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yccU [C]
Identifier: 39996714
GI number: 39996714
Start: 1767621
End: 1768025
Strand: Reverse
Name: yccU [C]
Synonym: GSU1614
Alternate gene names: 39996714
Gene position: 1768025-1767621 (Counterclockwise)
Preceding gene: 39996715
Following gene: 39996713
Centisome position: 46.35
GC content: 56.79
Gene sequence:
>405_bases ATGAGCACAAAAGAGCAGATCGACGCCTTTTTCACTTCAAAGGCGTTCGGGGTGGTGGGAGCTTCGGCCGACCGACACAA ATACGGGAACAAAGTCCTGAGGGTCTATCAACAGAAGAACCTGAAGGTCGTCCCGGTGAACCCCAGGGAACAGGAAATTG AAGGAGTGGCCTGCGTGGCCAGCGTGATGGACCTGCCGGATGAGGTAACGAGCATCTCGGTCATTACGCCGCCGAAGATC ACTGAAGAGGTGGTGGAAATGGCTGCCCGCAAGGGCATCCGCACTATCTGGATGCAACCGGGAGCCGAAAGCGACAAGGC GGTGGAGCTTTGCCGTCAAAACGGTATCACTGTCATCGCGGACGGGAGCTGCATTCTTGTTGTCCTGGGGTACCGCGACC ATTGA
Upstream 100 bases:
>100_bases GACTGGACCCGGCATTGAACGTGCGGGAACGGATTCCGGGTGGTGATTTTCGCAAAAGGATATACAATTCAATCTCGTCA CAACACGAGAGGAGGACACC
Downstream 100 bases:
>100_bases ACAGGGAACAGGAGCTGACACATCTCTTCCGCCGGGAGGGGCTCACGCCTGCAGTTGCGGACCTCTTCCGGCGGATCGTG TATGACTGGTATGCATCCCA
Product: CoA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSTKEQIDAFFTSKAFGVVGASADRHKYGNKVLRVYQQKNLKVVPVNPREQEIEGVACVASVMDLPDEVTSISVITPPKI TEEVVEMAARKGIRTIWMQPGAESDKAVELCRQNGITVIADGSCILVVLGYRDH
Sequences:
>Translated_134_residues MSTKEQIDAFFTSKAFGVVGASADRHKYGNKVLRVYQQKNLKVVPVNPREQEIEGVACVASVMDLPDEVTSISVITPPKI TEEVVEMAARKGIRTIWMQPGAESDKAVELCRQNGITVIADGSCILVVLGYRDH >Mature_133_residues STKEQIDAFFTSKAFGVVGASADRHKYGNKVLRVYQQKNLKVVPVNPREQEIEGVACVASVMDLPDEVTSISVITPPKIT EEVVEMAARKGIRTIWMQPGAESDKAVELCRQNGITVIADGSCILVVLGYRDH
Specific function: Unknown
COG id: COG1832
COG function: function code R; Predicted CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14690; Mature: 14559
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKEQIDAFFTSKAFGVVGASADRHKYGNKVLRVYQQKNLKVVPVNPREQEIEGVACVA CCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH SVMDLPDEVTSISVITPPKITEEVVEMAARKGIRTIWMQPGAESDKAVELCRQNGITVIA HHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEE DGSCILVVLGYRDH CCCEEEEEEECCCC >Mature Secondary Structure STKEQIDAFFTSKAFGVVGASADRHKYGNKVLRVYQQKNLKVVPVNPREQEIEGVACVA CCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH SVMDLPDEVTSISVITPPKITEEVVEMAARKGIRTIWMQPGAESDKAVELCRQNGITVIA HHHCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEEEE DGSCILVVLGYRDH CCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA