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The map label for this gene is rimP

Identifier: 39996685

GI number: 39996685

Start: 1738189

End: 1738668

Strand: Direct

Name: rimP

Synonym: GSU1585

Alternate gene names: 39996685

Gene position: 1738189-1738668 (Clockwise)

Preceding gene: 39996681

Following gene: 39996686

Centisome position: 45.57

GC content: 56.67

Gene sequence:

>480_bases
ATGCAGAAGGATGATGTTGCCGGTCGGATAACGGCGGTCGCCGAGCAGGTGCTTACCCCTCAAGGGCTGGAACTTGTGGA
GGTAGAGTACAAGCGCGAAGGACGGCAGATGGTTCTGCGTCTCTTTGTCGACAAGCCGGGTGGAATAAGTCTTGACGACT
GCGCCGCGGTCAGTCGCGAGTTGTCCGAAATTCTCGATGTCGAAGATTTTATTCGTGAGAATTACACGCTGGAGGTTTCA
TCGCCCGGCCTCAACCGTCCCCTGAAGAAAGAGGCGGATTATGAGCGCTATGCCGGGCGCCTTGTCAAGGTGCGCACATT
CGAGCTCCTGGCGGATGAAGAGGGGAACCGGCGCAAGACGTTCCTGGGTGATCTTGTCGGACTCTCCGACGGGGTCGTCA
CCCTTACGCTTCGGGAAGGGCAGCTGGCCCGCATCCCTCTGGATAAGATAGCTAAAGCTAACCTGGAATTCGAGTTTTAG

Upstream 100 bases:

>100_bases
GCATTTCCGTTCAACGCATGTTAAACATTTGTTTCAAGTAAATCGTTCACTAGAAAGTGGGCTCAGCAGCTCACTTTTTT
TATTTTGAGGTTTTTGATTC

Downstream 100 bases:

>100_bases
AAAGATCAGCTCAAGGAGATTGGACGTGGAAACGACCTTCAACCTCAAGCACATTATTGACCAGATCGTCAAGGAGAAGG
GGATTGACCGGCACATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKPGGISLDDCAAVSRELSEILDVEDFIRENYTLEVS
SPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRKTFLGDLVGLSDGVVTLTLREGQLARIPLDKIAKANLEFEF

Sequences:

>Translated_159_residues
MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKPGGISLDDCAAVSRELSEILDVEDFIRENYTLEVS
SPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRKTFLGDLVGLSDGVVTLTLREGQLARIPLDKIAKANLEFEF
>Mature_159_residues
MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKPGGISLDDCAAVSRELSEILDVEDFIRENYTLEVS
SPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRKTFLGDLVGLSDGVVTLTLREGQLARIPLDKIAKANLEFEF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=138, Percent_Identity=42.7536231884058, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_GEOSL (Q74CT6)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_952636.1
- ProteinModelPortal:   Q74CT6
- GeneID:   2685441
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU1585
- NMPDR:   fig|243231.1.peg.1574
- TIGR:   GSU1585
- HOGENOM:   HBG668072
- OMA:   ELVEVEW
- ProtClustDB:   PRK14647
- BioCyc:   GSUL243231:GSU_1585-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17900; Mature: 17900

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKPGGISLDDCAAVSRE
CCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH
LSEILDVEDFIRENYTLEVSSPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRKT
HHHHHCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHCCEEEEEEEEEEEECCCCCCHHH
FLGDLVGLSDGVVTLTLREGQLARIPLDKIAKANLEFEF
HHHHHHCCCCCEEEEEECCCCEEECCHHHHHHCCCCCCC
>Mature Secondary Structure
MQKDDVAGRITAVAEQVLTPQGLELVEVEYKREGRQMVLRLFVDKPGGISLDDCAAVSRE
CCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH
LSEILDVEDFIRENYTLEVSSPGLNRPLKKEADYERYAGRLVKVRTFELLADEEGNRRKT
HHHHHCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHCCEEEEEEEEEEEECCCCCCHHH
FLGDLVGLSDGVVTLTLREGQLARIPLDKIAKANLEFEF
HHHHHHCCCCCEEEEEECCCCEEECCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA