| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39996675
Identifier: 39996675
GI number: 39996675
Start: 1726864
End: 1727592
Strand: Direct
Name: 39996675
Synonym: GSU1575
Alternate gene names: NA
Gene position: 1726864-1727592 (Clockwise)
Preceding gene: 39996674
Following gene: 39996676
Centisome position: 45.28
GC content: 62.14
Gene sequence:
>729_bases ATGACTTCGGTACAGAACCATTATGACCGGCTACTCGGCCCACTCTACGGCTGGATGCTGGGAGATGGGGAAAAAGCCAG GGAAAGGGCCCGTCAGGAGCTGCATGATGCGGGAATTTCAGCGGGTGATGGCCTGGCGGTCGATCTCGGCGCCGGCAATG GCCTGCATGCCGTCCCCCTGGCAGAGTCGGGCTATGCGGTGGTGGCGATCGACACCTGCCAGTCGCTGCTGGATGAACTG AGAGAGTCATCCGGGACGTTTGCCATCACCGCGGTACGGGACAGCCTCGAAACGTTCCGGCGCCATTGCCCGACAGCACC TGACGTGGTCGTCTGCATGGGTGATACGCTGACGCACCTCCCATCCCGGGAAGCGGTACAGGGACTCATCTCCGAGGTGG CTGCTTCCCTGGCGCCAGGGGGGATCTTTGTCACGACCTTTCGCGATTATGTAAGGGGGGTTCTGGAAGGGCCGGCCCGT TTCATCCCGGTGCAGAGCGATGAAGAGAAAATTCTGACCTGCTTCCTCGAATACGGCCGGGACCGGGTAATAGTGCACGA TATACTCCACACTCGCGCCCTGTCAGGGTGGGAGATGACCGTGAGCGCCTACCCCAAGGTCAGGCTCGACCCGGAATGGG TCGGTGCTCAACTTGGGCAACGGGGCCTGCAGGTCTGCACAGAGCCCGGCCAGCGCGGGATGGTGCGCATCGTGGCGCGG AAAATCTGA
Upstream 100 bases:
>100_bases AACTGACGGGGTGTCGGGCAGCAAGAACTGCCGAATGAATGCCGGTGACAGGCGCCGGTTTCGGAGGGGATTCAATGACA CAAGGGAAAGGGACGACAGG
Downstream 100 bases:
>100_bases TTAGAATACTCAATAGAGGAGATCATGAGAAGACTTGAAGGCAAGATTGCGCTGGTCACCGGCGCGGCAAGGGGGATAGG GGAGGCGATTGCCCGTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; SAM-Dependent Methyltransferases; Methyltransferase Domain Family Protein
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTSVQNHYDRLLGPLYGWMLGDGEKARERARQELHDAGISAGDGLAVDLGAGNGLHAVPLAESGYAVVAIDTCQSLLDEL RESSGTFAITAVRDSLETFRRHCPTAPDVVVCMGDTLTHLPSREAVQGLISEVAASLAPGGIFVTTFRDYVRGVLEGPAR FIPVQSDEEKILTCFLEYGRDRVIVHDILHTRALSGWEMTVSAYPKVRLDPEWVGAQLGQRGLQVCTEPGQRGMVRIVAR KI
Sequences:
>Translated_242_residues MTSVQNHYDRLLGPLYGWMLGDGEKARERARQELHDAGISAGDGLAVDLGAGNGLHAVPLAESGYAVVAIDTCQSLLDEL RESSGTFAITAVRDSLETFRRHCPTAPDVVVCMGDTLTHLPSREAVQGLISEVAASLAPGGIFVTTFRDYVRGVLEGPAR FIPVQSDEEKILTCFLEYGRDRVIVHDILHTRALSGWEMTVSAYPKVRLDPEWVGAQLGQRGLQVCTEPGQRGMVRIVAR KI >Mature_241_residues TSVQNHYDRLLGPLYGWMLGDGEKARERARQELHDAGISAGDGLAVDLGAGNGLHAVPLAESGYAVVAIDTCQSLLDELR ESSGTFAITAVRDSLETFRRHCPTAPDVVVCMGDTLTHLPSREAVQGLISEVAASLAPGGIFVTTFRDYVRGVLEGPARF IPVQSDEEKILTCFLEYGRDRVIVHDILHTRALSGWEMTVSAYPKVRLDPEWVGAQLGQRGLQVCTEPGQRGMVRIVARK I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26340; Mature: 26209
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVQNHYDRLLGPLYGWMLGDGEKARERARQELHDAGISAGDGLAVDLGAGNGLHAVPL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEE AESGYAVVAIDTCQSLLDELRESSGTFAITAVRDSLETFRRHCPTAPDVVVCMGDTLTHL CCCCCEEEEHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEECCCHHHHC PSREAVQGLISEVAASLAPGGIFVTTFRDYVRGVLEGPARFIPVQSDEEKILTCFLEYGR CCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCC DRVIVHDILHTRALSGWEMTVSAYPKVRLDPEWVGAQLGQRGLQVCTEPGQRGMVRIVAR CEEHHHHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KI CC >Mature Secondary Structure TSVQNHYDRLLGPLYGWMLGDGEKARERARQELHDAGISAGDGLAVDLGAGNGLHAVPL CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEE AESGYAVVAIDTCQSLLDELRESSGTFAITAVRDSLETFRRHCPTAPDVVVCMGDTLTHL CCCCCEEEEHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCCCCCCEEEECCCHHHHC PSREAVQGLISEVAASLAPGGIFVTTFRDYVRGVLEGPARFIPVQSDEEKILTCFLEYGR CCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCC DRVIVHDILHTRALSGWEMTVSAYPKVRLDPEWVGAQLGQRGLQVCTEPGQRGMVRIVAR CEEHHHHHHHHHHCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA