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The map label for this gene is ywjB [H]

Identifier: 39996672

GI number: 39996672

Start: 1725013

End: 1725540

Strand: Direct

Name: ywjB [H]

Synonym: GSU1572

Alternate gene names: 39996672

Gene position: 1725013-1725540 (Clockwise)

Preceding gene: 39996671

Following gene: 39996673

Centisome position: 45.23

GC content: 58.71

Gene sequence:

>528_bases
ATGGATGTCATCTATTATGTCGCAGCAAGCCTGGACGGCTACATTGCCACGCCGGACGGGGGCGTTGCCTGGCTGGCACC
GTTCGAAAATGCCGGCGAGGATTACGGTTACGCTGAATTCTACGCGTCGGTCGATGCCCTGCTTATGGGGAGCGCCACTT
ACGAGAAAACGCTTTCGTTCGGCGCATGGCCCTACGAGGGAAAACCTTGCCGCGTCTTTTCAAGGCAAGAGCATGCGGTA
CCGACTCATGATGTCGTGATTACCGATGCCACACCGGACGACGTGCTCCATTCCCTGTTGCGCAACGGCTGCCGGCGCGC
CTGGCTGGTCGGGGGCGGTGTGCTGGCGGCGTCATTTCTTCAACGGCGATTGATCAGCGAGTACATCGTTTCCATCGTCC
CGGTCATCTTGGGAGGGGGGATTCCGATGATTTCACCCAACAGAATACGGGAGTCACTGACGCTGCTGGAAACCAAAGTC
TGCACCGGTGGTATCGTGCAGGTCCGATACCGCTCGGAAGGGCACTGA

Upstream 100 bases:

>100_bases
TGCTGGTGCAAGGGACCGTGGAAGTGGTCGGGCGGGAGGGTTGACGTCCGGCCACACAACTAATAGTTGGTGCACGAACG
TGCGGTGGGAGACTGGAACG

Downstream 100 bases:

>100_bases
TCCGTCGATTACCGCTGTTTGGGTAACATGCGGATCTTTCGTCGACAGGCGGCGGGACGACCTGGTGAGCAGCTTTGGCA
TTGATTGCCCTTCGTTACGA

Product: riboflavin biosynthesis protein RibD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDVIYYVAASLDGYIATPDGGVAWLAPFENAGEDYGYAEFYASVDALLMGSATYEKTLSFGAWPYEGKPCRVFSRQEHAV
PTHDVVITDATPDDVLHSLLRNGCRRAWLVGGGVLAASFLQRRLISEYIVSIVPVILGGGIPMISPNRIRESLTLLETKV
CTGGIVQVRYRSEGH

Sequences:

>Translated_175_residues
MDVIYYVAASLDGYIATPDGGVAWLAPFENAGEDYGYAEFYASVDALLMGSATYEKTLSFGAWPYEGKPCRVFSRQEHAV
PTHDVVITDATPDDVLHSLLRNGCRRAWLVGGGVLAASFLQRRLISEYIVSIVPVILGGGIPMISPNRIRESLTLLETKV
CTGGIVQVRYRSEGH
>Mature_175_residues
MDVIYYVAASLDGYIATPDGGVAWLAPFENAGEDYGYAEFYASVDALLMGSATYEKTLSFGAWPYEGKPCRVFSRQEHAV
PTHDVVITDATPDDVLHSLLRNGCRRAWLVGGGVLAASFLQRRLISEYIVSIVPVILGGGIPMISPNRIRESLTLLETKV
CTGGIVQVRYRSEGH

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yyaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 19086; Mature: 19086

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIYYVAASLDGYIATPDGGVAWLAPFENAGEDYGYAEFYASVDALLMGSATYEKTLSF
CCEEEEEEECCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHC
GAWPYEGKPCRVFSRQEHAVPTHDVVITDATPDDVLHSLLRNGCRRAWLVGGGVLAASFL
CCCCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCHHHHHHHH
QRRLISEYIVSIVPVILGGGIPMISPNRIRESLTLLETKVCTGGIVQVRYRSEGH
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
>Mature Secondary Structure
MDVIYYVAASLDGYIATPDGGVAWLAPFENAGEDYGYAEFYASVDALLMGSATYEKTLSF
CCEEEEEEECCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHC
GAWPYEGKPCRVFSRQEHAVPTHDVVITDATPDDVLHSLLRNGCRRAWLVGGGVLAASFL
CCCCCCCCCEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEECCHHHHHHHH
QRRLISEYIVSIVPVILGGGIPMISPNRIRESLTLLETKVCTGGIVQVRYRSEGH
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]