| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996673
Identifier: 39996673
GI number: 39996673
Start: 1725783
End: 1726538
Strand: Direct
Name: 39996673
Synonym: GSU1573
Alternate gene names: NA
Gene position: 1725783-1726538 (Clockwise)
Preceding gene: 39996672
Following gene: 39996674
Centisome position: 45.25
GC content: 57.94
Gene sequence:
>756_bases ATGTTTACACCGTTCCTGGCGGCTCTCGTCGTGCAACGACTTGTCTGCCGGCAGCCATTTTTAGGGCCACTGGGGTTGGT CGTGCGCCCGAACCGTTGGTATGTGGCGGGTCTGTTCGTTCCGCCGCTGCTTGCAATGCTTTCTGCAGCCGCAAGTTTGC TGGTCCCCGGGGTAACACTAAGCGCAGACATTTTTGATGCGAATATCATGAAGACTCTGGGAGAAGCCGTCCCTTCCGAA CAAATGGCCCAGGTGCGCCGGCAGATCGCCAGTCTCCCACTGCATCCGGCCTGGTTGATCCTGGTTGGGGGGACGCTTGT TGGTGCCACGGTCAACGCTGTTGCTGCATTAGGGGAAGAAGTGGGCTGGCGCGGTTTACTGTATATGGAACTCGCCCATC TCGGATTCTGGCGGTCCTCCTGGCTGATTGGGCTAGTCTGGGGAGCCTGGCATGCACCTATGATCCTCAACGGGTACAAC TATCCTGGCCATCCCGTTGCGGGCGTAGCACTCATGGTGGTATGGGCAATACTTTTTTCTCCGCTCATCGGGTATGTGCG CAGCAGGACTGGGTCGGTTGTTGCTGCGGCGATGATGCACGGCAGTCTGAACGGCGTAGGCATGGCCCCGGCCGCCATTT TGACCGGCGGCGACAGCCTGACCACCGGCATTCTCGGAATTCCGGGGATTGGTGTGCTGACAGTCCTGAATGTCTGCCTG TATTTCTTTATTGGTAAGAAAGGTGTGTCCGGATGA
Upstream 100 bases:
>100_bases GATAATAACCTTCGTATTGAGTTGGGGTATGACCTGGACCTATTTCGGGCTGGGAGGAAGAGTCTCCCAACCGCTTTTCT ACGTCATATCGGTAGCTGTC
Downstream 100 bases:
>100_bases CTGAAATTTTTCCCCAGCAACTCATCGAGGCATTAGTAGCCCGGGAGATCGCTGATGCGACGTTACCTTTTGGAATTGTC CAGGGGCACAATGGTGGTGG
Product: CAAX amino terminal protease
Products: NA
Alternate protein names: Phosphoenolpyruvate Synthase; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MFTPFLAALVVQRLVCRQPFLGPLGLVVRPNRWYVAGLFVPPLLAMLSAAASLLVPGVTLSADIFDANIMKTLGEAVPSE QMAQVRRQIASLPLHPAWLILVGGTLVGATVNAVAALGEEVGWRGLLYMELAHLGFWRSSWLIGLVWGAWHAPMILNGYN YPGHPVAGVALMVVWAILFSPLIGYVRSRTGSVVAAAMMHGSLNGVGMAPAAILTGGDSLTTGILGIPGIGVLTVLNVCL YFFIGKKGVSG
Sequences:
>Translated_251_residues MFTPFLAALVVQRLVCRQPFLGPLGLVVRPNRWYVAGLFVPPLLAMLSAAASLLVPGVTLSADIFDANIMKTLGEAVPSE QMAQVRRQIASLPLHPAWLILVGGTLVGATVNAVAALGEEVGWRGLLYMELAHLGFWRSSWLIGLVWGAWHAPMILNGYN YPGHPVAGVALMVVWAILFSPLIGYVRSRTGSVVAAAMMHGSLNGVGMAPAAILTGGDSLTTGILGIPGIGVLTVLNVCL YFFIGKKGVSG >Mature_251_residues MFTPFLAALVVQRLVCRQPFLGPLGLVVRPNRWYVAGLFVPPLLAMLSAAASLLVPGVTLSADIFDANIMKTLGEAVPSE QMAQVRRQIASLPLHPAWLILVGGTLVGATVNAVAALGEEVGWRGLLYMELAHLGFWRSSWLIGLVWGAWHAPMILNGYN YPGHPVAGVALMVVWAILFSPLIGYVRSRTGSVVAAAMMHGSLNGVGMAPAAILTGGDSLTTGILGIPGIGVLTVLNVCL YFFIGKKGVSG
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26452; Mature: 26452
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTPFLAALVVQRLVCRQPFLGPLGLVVRPNRWYVAGLFVPPLLAMLSAAASLLVPGVTL CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCEE SADIFDANIMKTLGEAVPSEQMAQVRRQIASLPLHPAWLILVGGTLVGATVNAVAALGEE EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHEEECCHHHHHHHHHHHHHHHH VGWRGLLYMELAHLGFWRSSWLIGLVWGAWHAPMILNGYNYPGHPVAGVALMVVWAILFS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH PLIGYVRSRTGSVVAAAMMHGSLNGVGMAPAAILTGGDSLTTGILGIPGIGVLTVLNVCL HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHEEECCCHHHHHHHCCCCHHHHHHHHHHH YFFIGKKGVSG HHHHHCCCCCC >Mature Secondary Structure MFTPFLAALVVQRLVCRQPFLGPLGLVVRPNRWYVAGLFVPPLLAMLSAAASLLVPGVTL CCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCEE SADIFDANIMKTLGEAVPSEQMAQVRRQIASLPLHPAWLILVGGTLVGATVNAVAALGEE EHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHEEECCHHHHHHHHHHHHHHHH VGWRGLLYMELAHLGFWRSSWLIGLVWGAWHAPMILNGYNYPGHPVAGVALMVVWAILFS HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH PLIGYVRSRTGSVVAAAMMHGSLNGVGMAPAAILTGGDSLTTGILGIPGIGVLTVLNVCL HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHEEECCCHHHHHHHCCCCHHHHHHHHHHH YFFIGKKGVSG HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA