Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is 39996652

Identifier: 39996652

GI number: 39996652

Start: 1704642

End: 1705172

Strand: Direct

Name: 39996652

Synonym: GSU1552

Alternate gene names: NA

Gene position: 1704642-1705172 (Clockwise)

Preceding gene: 39996651

Following gene: 39996653

Centisome position: 44.69

GC content: 62.71

Gene sequence:

>531_bases
ATGGATCTCTTTCAGCTCCGGGAACAGTTCTCCAGGGACGGCATCCTCATGTGCTTCAACGGCCCCTTCTCTCACAGCAT
CATCGAGGAGATCGGCATTGCCATCAGGAACCACTTGGCCGCCGAGAACATTGCCCGCATGGCGGTTCAGGACGTGTTCG
CCGTCTACATCGAGATGACCCAGAACGCCCGCAACTATCTGACCCGCCGGGACATCTCCCCGGCCGAGGCCGGTTCGGCC
ACCATCGTCATTGCCCGGCGGGACGAGTTCTACTCCGTCACCTCGGGCAACGTGATCCTGAATGATGATGTGGAGCAGCT
GCGCACCCGGATTGACCACATCAAGGCCCAGGCGCCGGACGAGCTGAAAAAGCTCATCCGGCAGCAACTGCGTGCCGAGG
TCCAGCCCGGCGCGATGGGGGCGGGCATCGGCCTCATGGAAATGGCTAAGCGGGCCTCCGGCCGGCTGGAGTACAGCGTC
CGCCCCGTCGACGGCCGGCATTCGTTTTTCACGCTGACAGCGCACATCTAG

Upstream 100 bases:

>100_bases
CGCCAGCGCGACGACATTACCTTGGCGGGATTCCGTTTCTGACGGTCCGCCGGGACGCCGCGAACAGTGTTCGCGCCATT
GCTATCAACAGGGAGGAATC

Downstream 100 bases:

>100_bases
GAGGCTCCGCATGCGAGTGTTCGATACCATACAGCAGACCGTCTCAACGCCCCTGGTCAGCTATGAGCCCGGGGGGCGGG
TCCTGGCGATTTCGGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MDLFQLREQFSRDGILMCFNGPFSHSIIEEIGIAIRNHLAAENIARMAVQDVFAVYIEMTQNARNYLTRRDISPAEAGSA
TIVIARRDEFYSVTSGNVILNDDVEQLRTRIDHIKAQAPDELKKLIRQQLRAEVQPGAMGAGIGLMEMAKRASGRLEYSV
RPVDGRHSFFTLTAHI

Sequences:

>Translated_176_residues
MDLFQLREQFSRDGILMCFNGPFSHSIIEEIGIAIRNHLAAENIARMAVQDVFAVYIEMTQNARNYLTRRDISPAEAGSA
TIVIARRDEFYSVTSGNVILNDDVEQLRTRIDHIKAQAPDELKKLIRQQLRAEVQPGAMGAGIGLMEMAKRASGRLEYSV
RPVDGRHSFFTLTAHI
>Mature_176_residues
MDLFQLREQFSRDGILMCFNGPFSHSIIEEIGIAIRNHLAAENIARMAVQDVFAVYIEMTQNARNYLTRRDISPAEAGSA
TIVIARRDEFYSVTSGNVILNDDVEQLRTRIDHIKAQAPDELKKLIRQQLRAEVQPGAMGAGIGLMEMAKRASGRLEYSV
RPVDGRHSFFTLTAHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19804; Mature: 19804

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFQLREQFSRDGILMCFNGPFSHSIIEEIGIAIRNHLAAENIARMAVQDVFAVYIEMT
CCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNARNYLTRRDISPAEAGSATIVIARRDEFYSVTSGNVILNDDVEQLRTRIDHIKAQAPD
HHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCEEECCCHHHHHHHHHHHHCCCCH
ELKKLIRQQLRAEVQPGAMGAGIGLMEMAKRASGRLEYSVRPVDGRHSFFTLTAHI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEC
>Mature Secondary Structure
MDLFQLREQFSRDGILMCFNGPFSHSIIEEIGIAIRNHLAAENIARMAVQDVFAVYIEMT
CCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNARNYLTRRDISPAEAGSATIVIARRDEFYSVTSGNVILNDDVEQLRTRIDHIKAQAPD
HHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCCEEECCCHHHHHHHHHHHHCCCCH
ELKKLIRQQLRAEVQPGAMGAGIGLMEMAKRASGRLEYSVRPVDGRHSFFTLTAHI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA