| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996653
Identifier: 39996653
GI number: 39996653
Start: 1705183
End: 1705563
Strand: Direct
Name: 39996653
Synonym: GSU1553
Alternate gene names: NA
Gene position: 1705183-1705563 (Clockwise)
Preceding gene: 39996652
Following gene: 39996654
Centisome position: 44.71
GC content: 60.1
Gene sequence:
>381_bases ATGCGAGTGTTCGATACCATACAGCAGACCGTCTCAACGCCCCTGGTCAGCTATGAGCCCGGGGGGCGGGTCCTGGCGAT TTCGGGCGAATCCTACCCGGAAAACTCCTTCGAGTTCTACGCACCCATCGCCCAGTGGGTGAAAGCGGCCCTCGCCGATC CCGAGGGGCTCACGCTGGACATCAACGTCAGCTACATGAACAGCAGCAGCACCAAGTGCATGCTTGATCTGCTCGACCTG TTCGAGGACGCCTACGGCCGGGGAGCAGCCGTGTCCATCACCTGGCGCTACGACAGGGAGAATCCCCGGTCCCTTGATCT TGCAGAGGAGTTCAAGGAAGAGGTCACCCTGCCGTTTGCCATCGTGGAACTGGAAGAATGA
Upstream 100 bases:
>100_bases ATGGCTAAGCGGGCCTCCGGCCGGCTGGAGTACAGCGTCCGCCCCGTCGACGGCCGGCATTCGTTTTTCACGCTGACAGC GCACATCTAGGAGGCTCCGC
Downstream 100 bases:
>100_bases GGTGGGTATGCCGCGAAAGAAGAAAACCGTCGAAGACCCCGCGCTGACCCGTGCCTTGAAGGTCATGGAGGCGGGCGCGT TGCCGGATGCTGACCTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Fe-S Oxidoreductase
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRVFDTIQQTVSTPLVSYEPGGRVLAISGESYPENSFEFYAPIAQWVKAALADPEGLTLDINVSYMNSSSTKCMLDLLDL FEDAYGRGAAVSITWRYDRENPRSLDLAEEFKEEVTLPFAIVELEE
Sequences:
>Translated_126_residues MRVFDTIQQTVSTPLVSYEPGGRVLAISGESYPENSFEFYAPIAQWVKAALADPEGLTLDINVSYMNSSSTKCMLDLLDL FEDAYGRGAAVSITWRYDRENPRSLDLAEEFKEEVTLPFAIVELEE >Mature_126_residues MRVFDTIQQTVSTPLVSYEPGGRVLAISGESYPENSFEFYAPIAQWVKAALADPEGLTLDINVSYMNSSSTKCMLDLLDL FEDAYGRGAAVSITWRYDRENPRSLDLAEEFKEEVTLPFAIVELEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14152; Mature: 14152
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFDTIQQTVSTPLVSYEPGGRVLAISGESYPENSFEFYAPIAQWVKAALADPEGLTLD CCHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEE INVSYMNSSSTKCMLDLLDLFEDAYGRGAAVSITWRYDRENPRSLDLAEEFKEEVTLPFA EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEE IVELEE EEEECC >Mature Secondary Structure MRVFDTIQQTVSTPLVSYEPGGRVLAISGESYPENSFEFYAPIAQWVKAALADPEGLTLD CCHHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEE INVSYMNSSSTKCMLDLLDLFEDAYGRGAAVSITWRYDRENPRSLDLAEEFKEEVTLPFA EEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCCCEE IVELEE EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA