| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996589
Identifier: 39996589
GI number: 39996589
Start: 1632043
End: 1633914
Strand: Direct
Name: 39996589
Synonym: GSU1489
Alternate gene names: NA
Gene position: 1632043-1633914 (Clockwise)
Preceding gene: 308513301
Following gene: 39996590
Centisome position: 42.79
GC content: 57.59
Gene sequence:
>1872_bases ATGCGCGCATCCCAATCTGCCATTTTTCGTCGGATCGATCCCTTTGCAATTCTGTCGTTTACCATACCACTTGCCGTTTA TTTGCTTACTCTTGCTCCCTCAGTGACGTTTTTTGACAGTGGCGAGTTCATAACGGCCATCCATTCCCTGGGGACGGCCC ATTCACCCGGCTACCCCCTCTTCGTCAATTACGGCAAACCATTCACCTGGCTCCCCTTCGGCAACATCGCTTTCCGGGTC AATATCGCCACGGCCGTTTCCGCGTCAGCGGCCTGTTTTGCCGTCTATTTTCTGACTCATTATCTGTTGAAGCGGGAAGA ACTGGTTCCGGATTTACGATTTTCGGATACCTTTGCCAGGTTGTGCGGACTGGCCGCGGCCCTTGCCTTTGCCTTTTCCG CGCGGCTCTGGCTCCAGTCAAACCACGACAAACCCTATCCCCTGGTGGCTTTCATGACAGCCATGGTCTTTTATCTTCTC GTCACATGGCGCGAGCGCTACGATGAGGGAGAGATGCGGCCGTCACACATCTACCTGGGGGCATTCATCTGCGGGCTCGC CACGGGCGCCCATCAGACCATAGTGCTCATGCTCCCTGCCTATGCATGGCTGATCCTTTCCAAAAACTGGCGCCTGGCGG CAAGGGTAAAGGAGCTTGCTCTTACGGTCGCCTTCGGCCTCATGGGGTTTGCCATTCAGCTCCACATGCCGATCCGTGCC ATGCGTAACCCGCTGCTCAACTGGGGAGATCCCCGGACCCTCGATCTGTTTCTCTGGAATTTCCTCCGTAAGGGATATCC GGTGGAACCGCCGGACCGGAACCTGGCCCTTGCCTGGCAGCAGCTCTCCGCCTTCAACTTGCCCCGGGAGTTCACATGGG TCGGCCTTGTTTTGCTGCTGGTGGGGATTGGCGCATTTTTCACGCGGCGCAGGGATGAAATCATCGCCTACCTGCTCGCC ATTGTCTGTTCACTGCTGGTTATTGTCGGCTATTTCAACACGCCTGGCGATCTCATTTTTCTCACCGAGGAGTTCTTCAC CCCGATCTACCTCCTCTCGGCAGTATTCATTGGACTGGGGCTTTTTACGCTGCTGAGGTTGGCGCTCAGGAACAATCCGG TGGAGAAACTGCGGACGGTGCCGATAAAGTTAATGGCGGGCTTGCTGCTCCTTGTTCTTCCTTCGGCCATCTGCGCCATG AATTACTACGAGAACGATCAGCACGAGAATTATGTGGCCTTTGATTACGCCACCAATACCCTGCGCTCTCTTTCGCCGGG CGCGGTTCTCTTCACATGGGGCGACAGCGGTGCCTTCCCCCTCTGGTATCTGCAGGGGGTGGAACGGATGCGCGAGGACC TGGACCTTCTGCACACGCCCCACCTGGTTTTTGATTGGTATCTGGATGCCTTCCCCCACCTGTTCGGCAGGAGCGTGCTC CGAACAATGCCGGAGAGACGGCAGTCGTCCGAAGTGGCTCTCAAACTGGCCGTGGCGGAACAGATCGTCAGCAGACCGGT CTTCATCGATTTTTCAACGCGCTACTCCCTTCCGTTTGCCGAATATGGCCTGAAGCAGCGCGGCATCTGTTACCAGTTGA TCAACGACGGCGGATCCGTCCTGCGGCCGCCTGATTTGGCGGTGTGGAGGCTCTATGCCTCACGGGGATACACGAGCCAG ATGGGCTTCAGGGATCTGGACACGGGCAAGGCGATACTCATTTACGCCAGCTGCCGCATGGAGGCCGGAGAAATACTGCT GCGCATGGGCTATCGCCAGCAGGGAGCCGAGGAGTTGTCGGCCGCCGCGGCCATAGCCCCCGAGTTGCGGGCACAGGTTG AGCAAGTGCTTGCGGCCTATGGAGCGAGGTGA
Upstream 100 bases:
>100_bases TGGAGGGAAGGACTTTCCCTTCAGGCGCTACGGCGCAGTGGACCCTTGTCGGGGACCGGGACCCCTTCGGGGGGGAAATG AGATTCATGGAGAGGTTCTG
Downstream 100 bases:
>100_bases TCATGCCGTTTACGGGTGCTACCAGAGTACTGGGAATCATCGGTCAGCCGGTGTCCCATTCGCTTTCGCCTCTCATGCAG AATGCGGCGCTGCAGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 623; Mature: 623
Protein sequence:
>623_residues MRASQSAIFRRIDPFAILSFTIPLAVYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPLFVNYGKPFTWLPFGNIAFRV NIATAVSASAACFAVYFLTHYLLKREELVPDLRFSDTFARLCGLAAALAFAFSARLWLQSNHDKPYPLVAFMTAMVFYLL VTWRERYDEGEMRPSHIYLGAFICGLATGAHQTIVLMLPAYAWLILSKNWRLAARVKELALTVAFGLMGFAIQLHMPIRA MRNPLLNWGDPRTLDLFLWNFLRKGYPVEPPDRNLALAWQQLSAFNLPREFTWVGLVLLLVGIGAFFTRRRDEIIAYLLA IVCSLLVIVGYFNTPGDLIFLTEEFFTPIYLLSAVFIGLGLFTLLRLALRNNPVEKLRTVPIKLMAGLLLLVLPSAICAM NYYENDQHENYVAFDYATNTLRSLSPGAVLFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFDWYLDAFPHLFGRSVL RTMPERRQSSEVALKLAVAEQIVSRPVFIDFSTRYSLPFAEYGLKQRGICYQLINDGGSVLRPPDLAVWRLYASRGYTSQ MGFRDLDTGKAILIYASCRMEAGEILLRMGYRQQGAEELSAAAAIAPELRAQVEQVLAAYGAR
Sequences:
>Translated_623_residues MRASQSAIFRRIDPFAILSFTIPLAVYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPLFVNYGKPFTWLPFGNIAFRV NIATAVSASAACFAVYFLTHYLLKREELVPDLRFSDTFARLCGLAAALAFAFSARLWLQSNHDKPYPLVAFMTAMVFYLL VTWRERYDEGEMRPSHIYLGAFICGLATGAHQTIVLMLPAYAWLILSKNWRLAARVKELALTVAFGLMGFAIQLHMPIRA MRNPLLNWGDPRTLDLFLWNFLRKGYPVEPPDRNLALAWQQLSAFNLPREFTWVGLVLLLVGIGAFFTRRRDEIIAYLLA IVCSLLVIVGYFNTPGDLIFLTEEFFTPIYLLSAVFIGLGLFTLLRLALRNNPVEKLRTVPIKLMAGLLLLVLPSAICAM NYYENDQHENYVAFDYATNTLRSLSPGAVLFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFDWYLDAFPHLFGRSVL RTMPERRQSSEVALKLAVAEQIVSRPVFIDFSTRYSLPFAEYGLKQRGICYQLINDGGSVLRPPDLAVWRLYASRGYTSQ MGFRDLDTGKAILIYASCRMEAGEILLRMGYRQQGAEELSAAAAIAPELRAQVEQVLAAYGAR >Mature_623_residues MRASQSAIFRRIDPFAILSFTIPLAVYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPLFVNYGKPFTWLPFGNIAFRV NIATAVSASAACFAVYFLTHYLLKREELVPDLRFSDTFARLCGLAAALAFAFSARLWLQSNHDKPYPLVAFMTAMVFYLL VTWRERYDEGEMRPSHIYLGAFICGLATGAHQTIVLMLPAYAWLILSKNWRLAARVKELALTVAFGLMGFAIQLHMPIRA MRNPLLNWGDPRTLDLFLWNFLRKGYPVEPPDRNLALAWQQLSAFNLPREFTWVGLVLLLVGIGAFFTRRRDEIIAYLLA IVCSLLVIVGYFNTPGDLIFLTEEFFTPIYLLSAVFIGLGLFTLLRLALRNNPVEKLRTVPIKLMAGLLLLVLPSAICAM NYYENDQHENYVAFDYATNTLRSLSPGAVLFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFDWYLDAFPHLFGRSVL RTMPERRQSSEVALKLAVAEQIVSRPVFIDFSTRYSLPFAEYGLKQRGICYQLINDGGSVLRPPDLAVWRLYASRGYTSQ MGFRDLDTGKAILIYASCRMEAGEILLRMGYRQQGAEELSAAAAIAPELRAQVEQVLAAYGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93277080, Length=457, Percent_Identity=27.1334792122538, Blast_Score=116, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70303; Mature: 70303
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASQSAIFRRIDPFAILSFTIPLAVYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPL CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCE FVNYGKPFTWLPFGNIAFRVNIATAVSASAACFAVYFLTHYLLKREELVPDLRFSDTFAR EEECCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LCGLAAALAFAFSARLWLQSNHDKPYPLVAFMTAMVFYLLVTWRERYDEGEMRPSHIYLG HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AFICGLATGAHQTIVLMLPAYAWLILSKNWRLAARVKELALTVAFGLMGFAIQLHMPIRA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHH MRNPLLNWGDPRTLDLFLWNFLRKGYPVEPPDRNLALAWQQLSAFNLPREFTWVGLVLLL HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH VGIGAFFTRRRDEIIAYLLAIVCSLLVIVGYFNTPGDLIFLTEEFFTPIYLLSAVFIGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LFTLLRLALRNNPVEKLRTVPIKLMAGLLLLVLPSAICAMNYYENDQHENYVAFDYATNT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHH LRSLSPGAVLFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFDWYLDAFPHLFGRSVL HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RTMPERRQSSEVALKLAVAEQIVSRPVFIDFSTRYSLPFAEYGLKQRGICYQLINDGGSV HHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCEEECCCCCC LRPPDLAVWRLYASRGYTSQMGFRDLDTGKAILIYASCRMEAGEILLRMGYRQQGAEELS CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHCCHHHHH AAAAIAPELRAQVEQVLAAYGAR HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRASQSAIFRRIDPFAILSFTIPLAVYLLTLAPSVTFFDSGEFITAIHSLGTAHSPGYPL CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCCE FVNYGKPFTWLPFGNIAFRVNIATAVSASAACFAVYFLTHYLLKREELVPDLRFSDTFAR EEECCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LCGLAAALAFAFSARLWLQSNHDKPYPLVAFMTAMVFYLLVTWRERYDEGEMRPSHIYLG HHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AFICGLATGAHQTIVLMLPAYAWLILSKNWRLAARVKELALTVAFGLMGFAIQLHMPIRA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHH MRNPLLNWGDPRTLDLFLWNFLRKGYPVEPPDRNLALAWQQLSAFNLPREFTWVGLVLLL HCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH VGIGAFFTRRRDEIIAYLLAIVCSLLVIVGYFNTPGDLIFLTEEFFTPIYLLSAVFIGLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH LFTLLRLALRNNPVEKLRTVPIKLMAGLLLLVLPSAICAMNYYENDQHENYVAFDYATNT HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHH LRSLSPGAVLFTWGDSGAFPLWYLQGVERMREDLDLLHTPHLVFDWYLDAFPHLFGRSVL HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RTMPERRQSSEVALKLAVAEQIVSRPVFIDFSTRYSLPFAEYGLKQRGICYQLINDGGSV HHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCCEEECCCCCC LRPPDLAVWRLYASRGYTSQMGFRDLDTGKAILIYASCRMEAGEILLRMGYRQQGAEELS CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHCCHHHHH AAAAIAPELRAQVEQVLAAYGAR HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA