| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is aroE
Identifier: 39996590
GI number: 39996590
Start: 1633917
End: 1634777
Strand: Direct
Name: aroE
Synonym: GSU1490
Alternate gene names: 39996590
Gene position: 1633917-1634777 (Clockwise)
Preceding gene: 39996589
Following gene: 39996591
Centisome position: 42.84
GC content: 61.44
Gene sequence:
>861_bases ATGCCGTTTACGGGTGCTACCAGAGTACTGGGAATCATCGGTCAGCCGGTGTCCCATTCGCTTTCGCCTCTCATGCAGAA TGCGGCGCTGCAGGCCATGGGGCTCGATTATGCGTATGTTCCCTTTGCCGTTGAGGAGGACTGCCTGGCCGACGCGGTGA GGGGGTTGGCGGCCCTGGGTGTGGTCGGTTTCAATGTGACCATTCCTCATAAATCGGCCATCCTGCCGCTGCTGGACCGG CTTTCGCCGGAAGCCGAGCTGATCGGCGCCGCCAATGTCGTAAAACGCGAAGGGAGCGATCTGGTCGGATACAACACCGA CGGCACGGGGTTTATTCAGTCTCTGAGCGAAGATCTCGGTTTTACTCCGGCCGGGTGTCGGATTCTCGTCATGGGGGCCG GTGGTGCTGCCCGAGCAGCAGTTGCATCGTTGGCCGGTGCCGGGGCGGCATCGGTGGTTATCGCCAACCGGAGCATTGCC AGGGGGGAAGAGCTGTCGGCGGCGTTCAGGCGGCACTTTATCGGCACACAATTTGCTGCAATTCCCCTCGACCCGGAGAA CCTGAATCGGTGCGTTCAAAATTTTGACCTTCTGGTCAACACCTCTTCCGTGGGGATGGGGGGGACTGCTTTCCCGGGCA TGGATCTCTCCCGCATGGGTCCCCACGGTGCCGTGTACGACATGGTCTACGTTCCCGCCGTTACCCCCTTGCTCGCCGAG GCTGAGCGTTGCGGCATACGCTACGCCAACGGCATCGGCATGCTGGCGGCCCAGGGTGAGTGCGCGCTGGAACTATGGAC CGGAGTACGGCCTCCCGAGGGACTCATGAAAGCGTGTCTCATGGCGGCTCTGATGAGCTAA
Upstream 100 bases:
>100_bases GCCAGCAGGGAGCCGAGGAGTTGTCGGCCGCCGCGGCCATAGCCCCCGAGTTGCGGGCACAGGTTGAGCAAGTGCTTGCG GCCTATGGAGCGAGGTGATC
Downstream 100 bases:
>100_bases CTACTTCTTGACATTGGACTTTTGACGACCTACGATGGGTTCGTCGCCAATACGCCGGAGAGTCTATGCAGGCTAGCAGA CTGGGAGAACTCCTGGTTCG
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPFTGATRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALGVVGFNVTIPHKSAILPLLDR LSPEAELIGAANVVKREGSDLVGYNTDGTGFIQSLSEDLGFTPAGCRILVMGAGGAARAAVASLAGAGAASVVIANRSIA RGEELSAAFRRHFIGTQFAAIPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPGMDLSRMGPHGAVYDMVYVPAVTPLLAE AERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMAALMS
Sequences:
>Translated_286_residues MPFTGATRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALGVVGFNVTIPHKSAILPLLDR LSPEAELIGAANVVKREGSDLVGYNTDGTGFIQSLSEDLGFTPAGCRILVMGAGGAARAAVASLAGAGAASVVIANRSIA RGEELSAAFRRHFIGTQFAAIPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPGMDLSRMGPHGAVYDMVYVPAVTPLLAE AERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMAALMS >Mature_285_residues PFTGATRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALGVVGFNVTIPHKSAILPLLDRL SPEAELIGAANVVKREGSDLVGYNTDGTGFIQSLSEDLGFTPAGCRILVMGAGGAARAAVASLAGAGAASVVIANRSIAR GEELSAAFRRHFIGTQFAAIPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPGMDLSRMGPHGAVYDMVYVPAVTPLLAEA ERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMAALMS
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1787983, Length=288, Percent_Identity=33.6805555555556, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789675, Length=262, Percent_Identity=35.1145038167939, Blast_Score=131, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6320332, Length=288, Percent_Identity=28.8194444444444, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_GEOSL (Q74D29)
Other databases:
- EMBL: AE017180 - RefSeq: NP_952541.1 - HSSP: Q9SQT8 - ProteinModelPortal: Q74D29 - SMR: Q74D29 - GeneID: 2686141 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU1490 - NMPDR: fig|243231.1.peg.1479 - TIGR: GSU1490 - HOGENOM: HBG553408 - OMA: RVEVANR - ProtClustDB: CLSK828389 - BioCyc: GSUL243231:GSU_1490-MONOMER - BRENDA: 1.1.1.25 - GO: GO:0005737 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 29607; Mature: 29475
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: ACT_SITE 71-71
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTGATRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALG CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH VVGFNVTIPHKSAILPLLDRLSPEAELIGAANVVKREGSDLVGYNTDGTGFIQSLSEDLG HEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC FTPAGCRILVMGAGGAARAAVASLAGAGAASVVIANRSIARGEELSAAFRRHFIGTQFAA CCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCEEE IPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPGMDLSRMGPHGAVYDMVYVPAVTPLLAE ECCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH AERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMAALMS HHHCCCEEECCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PFTGATRVLGIIGQPVSHSLSPLMQNAALQAMGLDYAYVPFAVEEDCLADAVRGLAALG CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHH VVGFNVTIPHKSAILPLLDRLSPEAELIGAANVVKREGSDLVGYNTDGTGFIQSLSEDLG HEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHC FTPAGCRILVMGAGGAARAAVASLAGAGAASVVIANRSIARGEELSAAFRRHFIGTQFAA CCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHCCHHHHHHHHHHHCCCCEEE IPLDPENLNRCVQNFDLLVNTSSVGMGGTAFPGMDLSRMGPHGAVYDMVYVPAVTPLLAE ECCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH AERCGIRYANGIGMLAAQGECALELWTGVRPPEGLMKACLMAALMS HHHCCCEEECCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA