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The map label for this gene is 39996544

Identifier: 39996544

GI number: 39996544

Start: 1581389

End: 1582282

Strand: Reverse

Name: 39996544

Synonym: GSU1444

Alternate gene names: NA

Gene position: 1582282-1581389 (Counterclockwise)

Preceding gene: 39996547

Following gene: 39996543

Centisome position: 41.48

GC content: 59.73

Gene sequence:

>894_bases
ATGACCAGAATAATTCTTCTCATTCTCGCAATCATCCTTTTGACCGAGCCCTGTAATGCGGCCCAGAAGGTTTTCGTGCT
TCAGAGCGTGAGAGTAGCCCCCTATGAAGAGGCTCTCCGGGGGGTGAGAAGCGTTGTGAGCGGGACCATCAAAAGGGTCG
TTATCTCGGAAATGGAAGGGGTCGATGTGGCGCGAATGGTGCGCGACGAGCGCCCGGACGTGATTCTGGCGATCGGGGCA
GAGGCCCTGACCAGGGTAAAGCGGGTCAAGGACACCCCCATCGTCTACCTGATGGTTCTCGATCCCCAGAACACCCTCAC
CGCCGGCGACAACCTGACCGGCGTCAGCATGAACGTCCCGCCCGAACGGCAACTGGCGGCACTGCAGAGCCTCATGCCGC
GACTGAGGAAAATAGGAATTCCCTACAATCCCTCCCGGTCCGGCGTGCTTGCGCGCAAGGCCCAGGCCGCGGCCCGCTCG
ATGGGGATCGAGCCGGTCGCCCGTGAACTCCGCTCTGCCCGTGATGTGGTCCCGGTGGCGGAAGGACTGAAGGGGGAAGT
GGACGCTATCTGGATGCTTCCCGACACCACGGTGGTGACTCCCGAAAGCATAGAATTTCTCCTCCTTTTCTCACTCACCA
ACAGAATTCCCATTCTGACGTTTTCAGACAAGTACGTGCAGATGGGCGCCATCATGGCGCTCGACATCGACCCCTACGAC
CTGGGGAGGCAAGGCGGGGACCTGATCAGGCGAATACTGTCGGGTGCTCCGGTGGAGCAGGTCCAGCGAGTCGAACCCCG
CAGCATGGTCATGACGGTTAATGCGAAAGTTGCGCGTAAACTCGGTCTGACACTATCCGAAGAGGCCCTGGGAAGGGCCA
GGGTAATTCGATAG

Upstream 100 bases:

>100_bases
GTTATCGAAGCACTGGGTGCTGGGCAAGTCACAGTATACACCATATTGCTCTGCGTCGCTCAACCTAACAGAATCATTAC
TTTTTGTCTACTAGAACCAC

Downstream 100 bases:

>100_bases
GAGAGACCATGGGCATGCACGACACGCTAAAACAACGGCACGACAGTCTTGGTCTCAGGTTTTTCCTCCTCTTTGCATCA
ACGATCGCCGTTATATCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; ABC Transporter; ABC Transporter Periplasmic Protein; Permease; Permease Protein; ABC-Type Transporter Periplasmic Component; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTRIILLILAIILLTEPCNAAQKVFVLQSVRVAPYEEALRGVRSVVSGTIKRVVISEMEGVDVARMVRDERPDVILAIGA
EALTRVKRVKDTPIVYLMVLDPQNTLTAGDNLTGVSMNVPPERQLAALQSLMPRLRKIGIPYNPSRSGVLARKAQAAARS
MGIEPVARELRSARDVVPVAEGLKGEVDAIWMLPDTTVVTPESIEFLLLFSLTNRIPILTFSDKYVQMGAIMALDIDPYD
LGRQGGDLIRRILSGAPVEQVQRVEPRSMVMTVNAKVARKLGLTLSEEALGRARVIR

Sequences:

>Translated_297_residues
MTRIILLILAIILLTEPCNAAQKVFVLQSVRVAPYEEALRGVRSVVSGTIKRVVISEMEGVDVARMVRDERPDVILAIGA
EALTRVKRVKDTPIVYLMVLDPQNTLTAGDNLTGVSMNVPPERQLAALQSLMPRLRKIGIPYNPSRSGVLARKAQAAARS
MGIEPVARELRSARDVVPVAEGLKGEVDAIWMLPDTTVVTPESIEFLLLFSLTNRIPILTFSDKYVQMGAIMALDIDPYD
LGRQGGDLIRRILSGAPVEQVQRVEPRSMVMTVNAKVARKLGLTLSEEALGRARVIR
>Mature_296_residues
TRIILLILAIILLTEPCNAAQKVFVLQSVRVAPYEEALRGVRSVVSGTIKRVVISEMEGVDVARMVRDERPDVILAIGAE
ALTRVKRVKDTPIVYLMVLDPQNTLTAGDNLTGVSMNVPPERQLAALQSLMPRLRKIGIPYNPSRSGVLARKAQAAARSM
GIEPVARELRSARDVVPVAEGLKGEVDAIWMLPDTTVVTPESIEFLLLFSLTNRIPILTFSDKYVQMGAIMALDIDPYDL
GRQGGDLIRRILSGAPVEQVQRVEPRSMVMTVNAKVARKLGLTLSEEALGRARVIR

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32595; Mature: 32464

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIILLILAIILLTEPCNAAQKVFVLQSVRVAPYEEALRGVRSVVSGTIKRVVISEMEG
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VDVARMVRDERPDVILAIGAEALTRVKRVKDTPIVYLMVLDPQNTLTAGDNLTGVSMNVP
CHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCEEEEECCC
PERQLAALQSLMPRLRKIGIPYNPSRSGVLARKAQAAARSMGIEPVARELRSARDVVPVA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
EGLKGEVDAIWMLPDTTVVTPESIEFLLLFSLTNRIPILTFSDKYVQMGAIMALDIDPYD
CCCCCCCCEEEECCCCEEECCCCHHHEEEEEHHCCCEEEEECCCCEEECEEEEEECCHHH
LGRQGGDLIRRILSGAPVEQVQRVEPRSMVMTVNAKVARKLGLTLSEEALGRARVIR
CCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHCCEECHHHHCHHHCCC
>Mature Secondary Structure 
TRIILLILAIILLTEPCNAAQKVFVLQSVRVAPYEEALRGVRSVVSGTIKRVVISEMEG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VDVARMVRDERPDVILAIGAEALTRVKRVKDTPIVYLMVLDPQNTLTAGDNLTGVSMNVP
CHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCEEEEECCC
PERQLAALQSLMPRLRKIGIPYNPSRSGVLARKAQAAARSMGIEPVARELRSARDVVPVA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
EGLKGEVDAIWMLPDTTVVTPESIEFLLLFSLTNRIPILTFSDKYVQMGAIMALDIDPYD
CCCCCCCCEEEECCCCEEECCCCHHHEEEEEHHCCCEEEEECCCCEEECEEEEEECCHHH
LGRQGGDLIRRILSGAPVEQVQRVEPRSMVMTVNAKVARKLGLTLSEEALGRARVIR
CCCCHHHHHHHHHCCCCHHHHHHCCCCCEEEEECHHHHHHHCCEECHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA