Click here to switch to the map view.

The map label for this gene is cdhE [H]

Identifier: 39996540

GI number: 39996540

Start: 1577267

End: 1578244

Strand: Direct

Name: cdhE [H]

Synonym: GSU1440

Alternate gene names: 39996540

Gene position: 1577267-1578244 (Clockwise)

Preceding gene: 39996538

Following gene: 39996541

Centisome position: 41.35

GC content: 62.99

Gene sequence:

>978_bases
GTGCCGGTCATCTCCACGCAACTGGCGATGCGCGATACCCTCGGAGCCTGGCAGGCACGCTGGGGTATCGGACGCATGTC
GTACTTGGTGCCGCCCGGTCTGTACGCCATTGGCGCTCCCGGCCCCGGGACCCCGGTGGTGGTCACTGCCAACTACAAGA
TGAGCTACGATAGTGTCCGGTGGGAGCTGGCCGGCAGAGACATCTGGCTTCTGGTTCTGGAAACCCACGGCATTAATGTC
TGGTGCGCCGCCGGCAAGGGGACCTTCGGCACCGATGAGATCGTCAAGCGAGTCGGCCTCACCAGTTTGTCGCGGATAGT
GAATCACCGCACGCTGCTGCTGCCAATGCTGGGGGCTCCCGGTGTGGCTGCCCATCTGGTGCGACAGCGCACTGGCTTTA
AGGTCAGGTATGCCACTATCCGGGCCGCAGACCTGCCGGCATATCTGGATAACGGCATGATCGCGACGTCTGCCATGCGG
CAGCTCACGTTCACAACTGTCGAACGGCTTGTTCTCACCCCCATCGAGCTGGTTGCCGCCTGTAAATGGGGGCTGCCTGT
CATGGCTCTGATTGTGCTGGCCGCGGGATTTTCGGATGGGGCATTCTCTCCAGAGAGGGCGGTTCCCGCGGCTATCGCCT
GGGGGGCGACGATCGCGACCGGAGCCGTTGGCGCTCCACTTCTGCTGCCATGGCTTCCCGGCCGAAGCTTTGCTGTGAAG
GGGGCCTCGCTCGGCCTGCTGCTCGCGGCTCTCCTTGTCTGGTCCGGGCGCGGCATGGTCTCTCTTCACGAGGTCGCAGC
GCTCTTTTTCATTACCCCCGCTGTCTGCTCATTCCTCGCCCTGACGTTTACCGGAAGTACGCCCTTTACCTCGCGTTCGG
GTGTCAAGAAGGAGATGCGGGTCGCCCTTCCCGTCATGACCGCCGCGCTCGTGGCAGGGCTCACGTCATGGCTGTTCGGC
AGTTTCCTGTTATCTTGA

Upstream 100 bases:

>100_bases
TCGCCCCCCCTGTTGAGGTCCAAAGACGCCTGCGGTCAGCGGGACCATTAACGAAAATGTGCCGGGTTTTCTTCGTTGGC
TCGATACCCCGGCGGGGCGC

Downstream 100 bases:

>100_bases
CCGGGAGGTAGCATGATCGGTTTCCAGTATCTTGCCAATGTCGCCACCCTGGAGTTTATCGGAGAGAAATGCGTTGGTTG
CGGCATGTGTGTTGAGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ACDS complex subunit gamma; ACDS complex methyltransferase; Corrinoid/iron-sulfur component large subunit [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MPVISTQLAMRDTLGAWQARWGIGRMSYLVPPGLYAIGAPGPGTPVVVTANYKMSYDSVRWELAGRDIWLLVLETHGINV
WCAAGKGTFGTDEIVKRVGLTSLSRIVNHRTLLLPMLGAPGVAAHLVRQRTGFKVRYATIRAADLPAYLDNGMIATSAMR
QLTFTTVERLVLTPIELVAACKWGLPVMALIVLAAGFSDGAFSPERAVPAAIAWGATIATGAVGAPLLLPWLPGRSFAVK
GASLGLLLAALLVWSGRGMVSLHEVAALFFITPAVCSFLALTFTGSTPFTSRSGVKKEMRVALPVMTAALVAGLTSWLFG
SFLLS

Sequences:

>Translated_325_residues
MPVISTQLAMRDTLGAWQARWGIGRMSYLVPPGLYAIGAPGPGTPVVVTANYKMSYDSVRWELAGRDIWLLVLETHGINV
WCAAGKGTFGTDEIVKRVGLTSLSRIVNHRTLLLPMLGAPGVAAHLVRQRTGFKVRYATIRAADLPAYLDNGMIATSAMR
QLTFTTVERLVLTPIELVAACKWGLPVMALIVLAAGFSDGAFSPERAVPAAIAWGATIATGAVGAPLLLPWLPGRSFAVK
GASLGLLLAALLVWSGRGMVSLHEVAALFFITPAVCSFLALTFTGSTPFTSRSGVKKEMRVALPVMTAALVAGLTSWLFG
SFLLS
>Mature_324_residues
PVISTQLAMRDTLGAWQARWGIGRMSYLVPPGLYAIGAPGPGTPVVVTANYKMSYDSVRWELAGRDIWLLVLETHGINVW
CAAGKGTFGTDEIVKRVGLTSLSRIVNHRTLLLPMLGAPGVAAHLVRQRTGFKVRYATIRAADLPAYLDNGMIATSAMRQ
LTFTTVERLVLTPIELVAACKWGLPVMALIVLAAGFSDGAFSPERAVPAAIAWGATIATGAVGAPLLLPWLPGRSFAVKG
ASLGLLLAALLVWSGRGMVSLHEVAALFFITPAVCSFLALTFTGSTPFTSRSGVKKEMRVALPVMTAALVAGLTSWLFGS
FLLS

Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2) [H]

COG id: COG1456

COG function: function code C; CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016041
- InterPro:   IPR016218
- InterPro:   IPR011005
- InterPro:   IPR007202 [H]

Pfam domain/function: PF03599 CdhD; PF04060 FeS [H]

EC number: NA

Molecular weight: Translated: 34479; Mature: 34348

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVISTQLAMRDTLGAWQARWGIGRMSYLVPPGLYAIGAPGPGTPVVVTANYKMSYDSVR
CCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCCCEEEEECCEECCCCEE
WELAGRDIWLLVLETHGINVWCAAGKGTFGTDEIVKRVGLTSLSRIVNHRTLLLPMLGAP
EEECCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
GVAAHLVRQRTGFKVRYATIRAADLPAYLDNGMIATSAMRQLTFTTVERLVLTPIELVAA
HHHHHHHHHHCCCEEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CKWGLPVMALIVLAAGFSDGAFSPERAVPAAIAWGATIATGAVGAPLLLPWLPGRSFAVK
HHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCEEEECCCCCCEEEC
GASLGLLLAALLVWSGRGMVSLHEVAALFFITPAVCSFLALTFTGSTPFTSRSGVKKEMR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHH
VALPVMTAALVAGLTSWLFGSFLLS
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PVISTQLAMRDTLGAWQARWGIGRMSYLVPPGLYAIGAPGPGTPVVVTANYKMSYDSVR
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCCCEEEEECCEECCCCEE
WELAGRDIWLLVLETHGINVWCAAGKGTFGTDEIVKRVGLTSLSRIVNHRTLLLPMLGAP
EEECCCEEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCC
GVAAHLVRQRTGFKVRYATIRAADLPAYLDNGMIATSAMRQLTFTTVERLVLTPIELVAA
HHHHHHHHHHCCCEEEEEEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
CKWGLPVMALIVLAAGFSDGAFSPERAVPAAIAWGATIATGAVGAPLLLPWLPGRSFAVK
HHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHCCCCCCEEEECCCCCCEEEC
GASLGLLLAALLVWSGRGMVSLHEVAALFFITPAVCSFLALTFTGSTPFTSRSGVKKEMR
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHH
VALPVMTAALVAGLTSWLFGSFLLS
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014 [H]