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The map label for this gene is 39996541

Identifier: 39996541

GI number: 39996541

Start: 1578257

End: 1578541

Strand: Direct

Name: 39996541

Synonym: GSU1441

Alternate gene names: NA

Gene position: 1578257-1578541 (Clockwise)

Preceding gene: 39996540

Following gene: 39996542

Centisome position: 41.38

GC content: 58.6

Gene sequence:

>285_bases
ATGATCGGTTTCCAGTATCTTGCCAATGTCGCCACCCTGGAGTTTATCGGAGAGAAATGCGTTGGTTGCGGCATGTGTGT
TGAGGTTTGCCCGCATCAGGTATTTCGTTTGGAAGGCTCAAAGGCGGAGGTTGTCGCACGTGACGACTGCATGGAGTGCG
GGGCCTGCGCGGTGAATTGCCCTGCAAGTGCGATCCGTGTGGATGCCGGGGTAGGCTGCGCATCGGGGATGATCAATGAG
TGGCTGGCCGGTGTTGTCGGTAGCAGGGGGGGCAGGTGCTGCTGA

Upstream 100 bases:

>100_bases
GGAGATGCGGGTCGCCCTTCCCGTCATGACCGCCGCGCTCGTGGCAGGGCTCACGTCATGGCTGTTCGGCAGTTTCCTGT
TATCTTGACCGGGAGGTAGC

Downstream 100 bases:

>100_bases
TCCATCTTGGGTGGAATTTCGTGATTGACATGGCAATGTGGGGCTGATAATTAATGATTACAAATCATTGCATCCAGGGA
GGGAGCGGCATGAAGAACAG

Product: ferredoxin family protein

Products: NA

Alternate protein names: Ferredoxin; Ferridoxin; 2(4Fe-4S) Ferredoxin-Domain-Containing Protein

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MIGFQYLANVATLEFIGEKCVGCGMCVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNCPASAIRVDAGVGCASGMINE
WLAGVVGSRGGRCC

Sequences:

>Translated_94_residues
MIGFQYLANVATLEFIGEKCVGCGMCVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNCPASAIRVDAGVGCASGMINE
WLAGVVGSRGGRCC
>Mature_94_residues
MIGFQYLANVATLEFIGEKCVGCGMCVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNCPASAIRVDAGVGCASGMINE
WLAGVVGSRGGRCC

Specific function: Unknown

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9752; Mature: 9752

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
16.0 %Cys+Met (Translated Protein)
11.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
16.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFQYLANVATLEFIGEKCVGCGMCVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNC
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHEECCCCCCEEEECCCHHHCCCEECCC
PASAIRVDAGVGCASGMINEWLAGVVGSRGGRCC
CCHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIGFQYLANVATLEFIGEKCVGCGMCVEVCPHQVFRLEGSKAEVVARDDCMECGACAVNC
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHEECCCCCCEEEECCCHHHCCCEECCC
PASAIRVDAGVGCASGMINEWLAGVVGSRGGRCC
CCHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA