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The map label for this gene is 39996523

Identifier: 39996523

GI number: 39996523

Start: 1558869

End: 1561043

Strand: Direct

Name: 39996523

Synonym: GSU1422

Alternate gene names: NA

Gene position: 1558869-1561043 (Clockwise)

Preceding gene: 39996522

Following gene: 39996524

Centisome position: 40.87

GC content: 63.17

Gene sequence:

>2175_bases
ATGCTCTGGATCAGTCGGGTCGAACTCCCCGCATTCGGCCGGTTCAGGGGGGCGTCGTTCACCTTCAGGCCGGGCATGAA
CCTGGTTTACGGCCGCAACGAGGCGGGCAAGTCGACGCTTGTGTCGGCAATTTCCGGAACCATCTTCGGTTTTCGCAAGG
AGCGCGATCGTTTCGTGCCCTGGACAGGCGGCGAACGGTGTGAGGCTCGGGTGAGTTTCACTTACAACGGCCGTGAAATG
ACCATTGCCCGCGACTTTCTCTCCGACCGCGTTCAAGCGATAGAGCGCGACGGGGAGAGGACCCTCTGGCGTTTCGAAGG
CAAGGTTTCCCCCCTGGGCAGAAGCAGCGAGCGCGAGGAATACCTGGCGAAGATTGAAGACGTGTGGGGATTTGCGGAAG
GGGACATTTTCCGCAATTCAGTCTACGTTGGGCAGCGCGACCTGCGGATCGAGGGCGATGCGGGGCTGACCACCCGCATC
AAGCAGCTCCTGTCGGGATTTGCCGAACTCGATTACGATGCGGTGGTGGAGAGCCTGGAGAAGGAACTGTTCGAGTTGAC
CAAGCGCCCCGGCGGTCGTTCGCGAGACCGGGAGCTGGAAGAGGTTCGTGCGCGTATGGCAGTCCTGGCCGAGCAATGGC
GCGAGGCGAGCCGTGCCGTGTCGGAGCTTGCAGCCCTGGATGGGACGTTGGCCGAGTTGCGGACCGCCGTGGCAACGGGA
CGAGAGGATCTGGAAAAGGGAAAGCGTTATCTGGAGCGGGTGAGCAGATATCACGAGGCTGCCGCCCGGGAAGAGGCGCT
TCGCAAGGATTATGACCGCATCCGGGCTGAACGGGAAAAGGTTGAGGCGCTCACGGCAAAGAGACAATCGGTTGAAGAGC
GGCTTGCATCCCTGGGCGAGGCGGCAGGACTTCCCGACGGGTTTGCCAGGACCCTGGAAGCGTGGGTAGACGGCTCGGAG
CGGTTGACGGCGCTTGAGAGGGAGCTGGCGGGCCTGAGCGCCGACCGGACGCACGCCGGCTCCGTCCTGCAGGTGCCGAT
GCTGATCCTGGCTCTCCTGCTTTGGGCGGGCGCTACGGGGGCGTGGTTTTTGCTGCCCCAGGCATGGTTGCCCCTTGCCG
GGGGCGCCCTCGTCATCACGGTGTTCCTTTTTGTGCGAACCGTGCGCGCCGGTCAGGCTCGATCAGCCGAGATGGCCCGC
ATTCAGGGGCGCATCGACGGTCTCTCCGCCGATGCGGTCAGGCTCCGGGAAGAGCTCGACCGGACCGAGGCTGAGCTGGA
AAAGCGGCTGGGAACATTCGATCCTCTGCGGGTCAGCGATATTCTGCGCGAAATTGACCGCGCCGCGGAGGTGAGGGGGG
AATTGGCCCGGATAGAGAGTGCCCTTGGGGTCCTTCCGCCACTGGAGAGCATAAGGAGCCAGGAGGTTGAGCTGGCCCGG
GAACTGGCCGTGACCCGTGAAGGCATGGAGACTCTTATCGGGCGGGGCTTCCCGGTCATGTCCCCCCGTGAGTACGCTGA
GGCCGAGGAGAAGATGCGGCGGCTGGAGAGCGAGGTGGCCGAAAAAGAAAGACTCTGCCTCGCCAAGGAGCAGGAATTGG
CGGTTATGCGCCGGGGGAGCCTTAACCTGGAGGCCATTGCGGAAGAGGACGAGGAACTGAAGTCCCGCGAAACCCGCCTT
GTGCGTCGGGTGGAGGCGCTACGGCTCGCGGTCGACCTCCTGCGCGAGACCCTTGACGAGTATCGGGCCACTTATCTGTC
GCGCCTCGGCAGCGAGATCAACGGAAAGCTGTACAATCTCACTGCCGGCAGATACCGCGAGGCGATTCTGGATGACGGTT
TTGCGCTGTCCATCGGCGTCGAAGGGACTCCTCGCCCGGTGGGCGCCCTGAGCTGCGGCGCCCAGGATCAGGCCTATCTC
GCCACTCGGCTCGCTCTTGGCGGAATCCTTTCCCGTAGCCGAAAATTGCCTTTTCTTCTCGACGACCCTTTGGTACATTT
CGACGAAGAGCGCAGGGCCGCGGCTCTGGCGGCGCTTAACGTCGCAGCCTCCGATCACCAGGTAATCCTCCTGGTCCACG
ATGAACGCTACCTGAAGGCACGGGGGGCGGATCTCTGGCACCGGGTCAAGATCGACACGAAAGGACAGCAGGATGGACAG
CTGCATCTTCTGTAA

Upstream 100 bases:

>100_bases
ATGAACGATACGACGCAGCAGGTTCCGACGCCGAACGCGAACTGTGCCGCGACGCCCTCAGGCTCGTCATGGGGCGGTTC
AGTCGTGGAGGGGGGAATTG

Downstream 100 bases:

>100_bases
GATTGTCGACGGGACGATCCCCGCGAAAAAAGTATATGAAGATGAGGATATGGTCGCCATTGAAGATATCAATCCCGTGG
CCCCCCATCACCTTCTCCTG

Product: nuclease SbcCD subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 724; Mature: 724

Protein sequence:

>724_residues
MLWISRVELPAFGRFRGASFTFRPGMNLVYGRNEAGKSTLVSAISGTIFGFRKERDRFVPWTGGERCEARVSFTYNGREM
TIARDFLSDRVQAIERDGERTLWRFEGKVSPLGRSSEREEYLAKIEDVWGFAEGDIFRNSVYVGQRDLRIEGDAGLTTRI
KQLLSGFAELDYDAVVESLEKELFELTKRPGGRSRDRELEEVRARMAVLAEQWREASRAVSELAALDGTLAELRTAVATG
REDLEKGKRYLERVSRYHEAAAREEALRKDYDRIRAEREKVEALTAKRQSVEERLASLGEAAGLPDGFARTLEAWVDGSE
RLTALERELAGLSADRTHAGSVLQVPMLILALLLWAGATGAWFLLPQAWLPLAGGALVITVFLFVRTVRAGQARSAEMAR
IQGRIDGLSADAVRLREELDRTEAELEKRLGTFDPLRVSDILREIDRAAEVRGELARIESALGVLPPLESIRSQEVELAR
ELAVTREGMETLIGRGFPVMSPREYAEAEEKMRRLESEVAEKERLCLAKEQELAVMRRGSLNLEAIAEEDEELKSRETRL
VRRVEALRLAVDLLRETLDEYRATYLSRLGSEINGKLYNLTAGRYREAILDDGFALSIGVEGTPRPVGALSCGAQDQAYL
ATRLALGGILSRSRKLPFLLDDPLVHFDEERRAAALAALNVAASDHQVILLVHDERYLKARGADLWHRVKIDTKGQQDGQ
LHLL

Sequences:

>Translated_724_residues
MLWISRVELPAFGRFRGASFTFRPGMNLVYGRNEAGKSTLVSAISGTIFGFRKERDRFVPWTGGERCEARVSFTYNGREM
TIARDFLSDRVQAIERDGERTLWRFEGKVSPLGRSSEREEYLAKIEDVWGFAEGDIFRNSVYVGQRDLRIEGDAGLTTRI
KQLLSGFAELDYDAVVESLEKELFELTKRPGGRSRDRELEEVRARMAVLAEQWREASRAVSELAALDGTLAELRTAVATG
REDLEKGKRYLERVSRYHEAAAREEALRKDYDRIRAEREKVEALTAKRQSVEERLASLGEAAGLPDGFARTLEAWVDGSE
RLTALERELAGLSADRTHAGSVLQVPMLILALLLWAGATGAWFLLPQAWLPLAGGALVITVFLFVRTVRAGQARSAEMAR
IQGRIDGLSADAVRLREELDRTEAELEKRLGTFDPLRVSDILREIDRAAEVRGELARIESALGVLPPLESIRSQEVELAR
ELAVTREGMETLIGRGFPVMSPREYAEAEEKMRRLESEVAEKERLCLAKEQELAVMRRGSLNLEAIAEEDEELKSRETRL
VRRVEALRLAVDLLRETLDEYRATYLSRLGSEINGKLYNLTAGRYREAILDDGFALSIGVEGTPRPVGALSCGAQDQAYL
ATRLALGGILSRSRKLPFLLDDPLVHFDEERRAAALAALNVAASDHQVILLVHDERYLKARGADLWHRVKIDTKGQQDGQ
LHLL
>Mature_724_residues
MLWISRVELPAFGRFRGASFTFRPGMNLVYGRNEAGKSTLVSAISGTIFGFRKERDRFVPWTGGERCEARVSFTYNGREM
TIARDFLSDRVQAIERDGERTLWRFEGKVSPLGRSSEREEYLAKIEDVWGFAEGDIFRNSVYVGQRDLRIEGDAGLTTRI
KQLLSGFAELDYDAVVESLEKELFELTKRPGGRSRDRELEEVRARMAVLAEQWREASRAVSELAALDGTLAELRTAVATG
REDLEKGKRYLERVSRYHEAAAREEALRKDYDRIRAEREKVEALTAKRQSVEERLASLGEAAGLPDGFARTLEAWVDGSE
RLTALERELAGLSADRTHAGSVLQVPMLILALLLWAGATGAWFLLPQAWLPLAGGALVITVFLFVRTVRAGQARSAEMAR
IQGRIDGLSADAVRLREELDRTEAELEKRLGTFDPLRVSDILREIDRAAEVRGELARIESALGVLPPLESIRSQEVELAR
ELAVTREGMETLIGRGFPVMSPREYAEAEEKMRRLESEVAEKERLCLAKEQELAVMRRGSLNLEAIAEEDEELKSRETRL
VRRVEALRLAVDLLRETLDEYRATYLSRLGSEINGKLYNLTAGRYREAILDDGFALSIGVEGTPRPVGALSCGAQDQAYL
ATRLALGGILSRSRKLPFLLDDPLVHFDEERRAAALAALNVAASDHQVILLVHDERYLKARGADLWHRVKIDTKGQQDGQ
LHLL

Specific function: Unknown

COG id: COG4717

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81278; Mature: 81278

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWISRVELPAFGRFRGASFTFRPGMNLVYGRNEAGKSTLVSAISGTIFGFRKERDRFVP
CCEEEEECCCCCCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
WTGGERCEARVSFTYNGREMTIARDFLSDRVQAIERDGERTLWRFEGKVSPLGRSSEREE
CCCCCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHH
YLAKIEDVWGFAEGDIFRNSVYVGQRDLRIEGDAGLTTRIKQLLSGFAELDYDAVVESLE
HHHHHHHHHCCCCCCHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHH
KELFELTKRPGGRSRDRELEEVRARMAVLAEQWREASRAVSELAALDGTLAELRTAVATG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
REDLEKGKRYLERVSRYHEAAAREEALRKDYDRIRAEREKVEALTAKRQSVEERLASLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGLPDGFARTLEAWVDGSERLTALERELAGLSADRTHAGSVLQVPMLILALLLWAGATG
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
AWFLLPQAWLPLAGGALVITVFLFVRTVRAGQARSAEMARIQGRIDGLSADAVRLREELD
HHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
RTEAELEKRLGTFDPLRVSDILREIDRAAEVRGELARIESALGVLPPLESIRSQEVELAR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ELAVTREGMETLIGRGFPVMSPREYAEAEEKMRRLESEVAEKERLCLAKEQELAVMRRGS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LNLEAIAEEDEELKSRETRLVRRVEALRLAVDLLRETLDEYRATYLSRLGSEINGKLYNL
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEEE
TAGRYREAILDDGFALSIGVEGTPRPVGALSCGAQDQAYLATRLALGGILSRSRKLPFLL
CHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
DDPLVHFDEERRAAALAALNVAASDHQVILLVHDERYLKARGADLWHRVKIDTKGQQDGQ
CCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECCHHHHHCCCCCEEEEEECCCCCCCCC
LHLL
EECC
>Mature Secondary Structure
MLWISRVELPAFGRFRGASFTFRPGMNLVYGRNEAGKSTLVSAISGTIFGFRKERDRFVP
CCEEEEECCCCCCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
WTGGERCEARVSFTYNGREMTIARDFLSDRVQAIERDGERTLWRFEGKVSPLGRSSEREE
CCCCCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHH
YLAKIEDVWGFAEGDIFRNSVYVGQRDLRIEGDAGLTTRIKQLLSGFAELDYDAVVESLE
HHHHHHHHHCCCCCCHHHCCEEECCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHH
KELFELTKRPGGRSRDRELEEVRARMAVLAEQWREASRAVSELAALDGTLAELRTAVATG
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC
REDLEKGKRYLERVSRYHEAAAREEALRKDYDRIRAEREKVEALTAKRQSVEERLASLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGLPDGFARTLEAWVDGSERLTALERELAGLSADRTHAGSVLQVPMLILALLLWAGATG
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
AWFLLPQAWLPLAGGALVITVFLFVRTVRAGQARSAEMARIQGRIDGLSADAVRLREELD
HHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
RTEAELEKRLGTFDPLRVSDILREIDRAAEVRGELARIESALGVLPPLESIRSQEVELAR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ELAVTREGMETLIGRGFPVMSPREYAEAEEKMRRLESEVAEKERLCLAKEQELAVMRRGS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LNLEAIAEEDEELKSRETRLVRRVEALRLAVDLLRETLDEYRATYLSRLGSEINGKLYNL
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEEE
TAGRYREAILDDGFALSIGVEGTPRPVGALSCGAQDQAYLATRLALGGILSRSRKLPFLL
CHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
DDPLVHFDEERRAAALAALNVAASDHQVILLVHDERYLKARGADLWHRVKIDTKGQQDGQ
CCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEECCHHHHHCCCCCEEEEEECCCCCCCCC
LHLL
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA