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The map label for this gene is ygbF [H]

Identifier: 39996495

GI number: 39996495

Start: 1521470

End: 1521775

Strand: Direct

Name: ygbF [H]

Synonym: GSU1393

Alternate gene names: 39996495

Gene position: 1521470-1521775 (Clockwise)

Preceding gene: 39996494

Following gene: 39996502

Centisome position: 39.89

GC content: 59.8

Gene sequence:

>306_bases
ATGCTGGTCATCGTGGTTGAGAATGCGCCTCCGAGGCTGCGCGGCCGGCTGGCTCTCTGGCTGCTTGAAGTGCGGGCCGG
AGTCTACGTGGGCAAAGTCTCGCGTCGGGTGCGGGAGATGATCTGGAATACCACCGTGCAGGGGATAGACGACGGTAACG
CCGTCATGGCTTGGAGTACCAACACAGAGTCGGGTTTCGATTTCCTAACCCTCGGCGCTAACCGGCGAGTTCCGGTAGAG
ATGGATGGAATCAAGCTGGTGTCATTCCTGCCGGAGAATGGAGCACAGCAGGCTGCCGAACCATGA

Upstream 100 bases:

>100_bases
CCTACCATTGAGCAAGTGCTAGCAGCCGGTGGCATGGATGTGCCCACGCCGCCGCCCGAGTCGGTCGAAGCCGTAATTCC
GAACAAGGAGGGGATCGGAG

Downstream 100 bases:

>100_bases
CGAAACCTGTGAGAAAAGTTGGTAGGTTTGAGTTGTTTGGAAATTGCATGTGAATTCAATGATGTAGAGGAAGTGTGTTC
CCCGCATGCGCGGGGATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MLVIVVENAPPRLRGRLALWLLEVRAGVYVGKVSRRVREMIWNTTVQGIDDGNAVMAWSTNTESGFDFLTLGANRRVPVE
MDGIKLVSFLPENGAQQAAEP

Sequences:

>Translated_101_residues
MLVIVVENAPPRLRGRLALWLLEVRAGVYVGKVSRRVREMIWNTTVQGIDDGNAVMAWSTNTESGFDFLTLGANRRVPVE
MDGIKLVSFLPENGAQQAAEP
>Mature_101_residues
MLVIVVENAPPRLRGRLALWLLEVRAGVYVGKVSRRVREMIWNTTVQGIDDGNAVMAWSTNTESGFDFLTLGANRRVPVE
MDGIKLVSFLPENGAQQAAEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=91, Percent_Identity=68.1318681318681, Blast_Score=135, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11167; Mature: 11167

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIVVENAPPRLRGRLALWLLEVRAGVYVGKVSRRVREMIWNTTVQGIDDGNAVMAWST
CEEEEECCCCCCHHHHHHHHHEEHHCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
NTESGFDFLTLGANRRVPVEMDGIKLVSFLPENGAQQAAEP
CCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLVIVVENAPPRLRGRLALWLLEVRAGVYVGKVSRRVREMIWNTTVQGIDDGNAVMAWST
CEEEEECCCCCCHHHHHHHHHEEHHCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEC
NTESGFDFLTLGANRRVPVEMDGIKLVSFLPENGAQQAAEP
CCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]