Click here to switch to the map view.

The map label for this gene is ftn [H]

Identifier: 39996409

GI number: 39996409

Start: 1433423

End: 1433944

Strand: Direct

Name: ftn [H]

Synonym: GSU1307

Alternate gene names: 39996409

Gene position: 1433423-1433944 (Clockwise)

Preceding gene: 39996408

Following gene: 39996410

Centisome position: 37.58

GC content: 57.85

Gene sequence:

>522_bases
ATGCTGAACACCGAGATGGCCGCAGCCCTCAACAAGCACTTGAATATCGAACTCTATTCGGCCCAACTGTACCTCTCCAT
GTCGTCCTATGCCAACTCCATGGGGCTCAAGGGGGCCGCCACCTGGTTCATGGTCCAGTACCAGGAGGAGATGCTTCATT
TCATGAAGTTCTATCAGTACATCAACAGCCAGGGCGAGCACGTGACGCTCGGTCCCATAGACGCACCGCCGGCCGAGTTC
GCCTCCCTGCTGCAAATGTTCGAGAAGACCCTCGAACACGAGATGTACATCACCCGGTGCATCAACGATCTGACCGAGCT
GGCGGTCCGGCAGAAGGATCATGCCACCCAGATTTTCCTCCAGTGGTTCGTGACCGAGCAGATCGAGGAGGAGGAAAACG
ACCGGGAGATCATCGGTAAGCTGAAGCTGGTGGGAGACAACGGTTACGGCCTGCTGATGATCGACAACGAACTGGGTGTG
CGGGTGTTCACCGCCCCCCCAGTCGACGGCCAAGCGCCGTGA

Upstream 100 bases:

>100_bases
GCAATCTCTCAACCGGCCCTGCCGGCTGAACTGCCTGGCCTTTCGTTCGTTTTCCGATATACTGATCCCAACTCACCACA
CTCAAGGAGGAACATCATCC

Downstream 100 bases:

>100_bases
TGTCTTGCTGAGCGGTGTACGAGACCGGCTGCGGGGAGGCGGTTCTTCCTGCCTCCGCCGCAGTCGGCGTGTGAAAGGAC
GGCATGATGAAAATACGCTT

Product: ferritin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MLNTEMAAALNKHLNIELYSAQLYLSMSSYANSMGLKGAATWFMVQYQEEMLHFMKFYQYINSQGEHVTLGPIDAPPAEF
ASLLQMFEKTLEHEMYITRCINDLTELAVRQKDHATQIFLQWFVTEQIEEEENDREIIGKLKLVGDNGYGLLMIDNELGV
RVFTAPPVDGQAP

Sequences:

>Translated_173_residues
MLNTEMAAALNKHLNIELYSAQLYLSMSSYANSMGLKGAATWFMVQYQEEMLHFMKFYQYINSQGEHVTLGPIDAPPAEF
ASLLQMFEKTLEHEMYITRCINDLTELAVRQKDHATQIFLQWFVTEQIEEEENDREIIGKLKLVGDNGYGLLMIDNELGV
RVFTAPPVDGQAP
>Mature_173_residues
MLNTEMAAALNKHLNIELYSAQLYLSMSSYANSMGLKGAATWFMVQYQEEMLHFMKFYQYINSQGEHVTLGPIDAPPAEF
ASLLQMFEKTLEHEMYITRCINDLTELAVRQKDHATQIFLQWFVTEQIEEEENDREIIGKLKLVGDNGYGLLMIDNELGV
RVFTAPPVDGQAP

Specific function: Iron-storage protein [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1788216, Length=160, Percent_Identity=40.625, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI1788212, Length=122, Percent_Identity=29.5081967213115, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17506345, Length=158, Percent_Identity=31.6455696202532, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 19789; Mature: 19789

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTEMAAALNKHLNIELYSAQLYLSMSSYANSMGLKGAATWFMVQYQEEMLHFMKFYQY
CCCHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
INSQGEHVTLGPIDAPPAEFASLLQMFEKTLEHEMYITRCINDLTELAVRQKDHATQIFL
HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QWFVTEQIEEEENDREIIGKLKLVGDNGYGLLMIDNELGVRVFTAPPVDGQAP
HHHHHHHHHCCCCCHHHEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MLNTEMAAALNKHLNIELYSAQLYLSMSSYANSMGLKGAATWFMVQYQEEMLHFMKFYQY
CCCHHHHHHHHHCCCEEEEEEEEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
INSQGEHVTLGPIDAPPAEFASLLQMFEKTLEHEMYITRCINDLTELAVRQKDHATQIFL
HCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QWFVTEQIEEEENDREIIGKLKLVGDNGYGLLMIDNELGVRVFTAPPVDGQAP
HHHHHHHHHCCCCCHHHEEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]