| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996408
Identifier: 39996408
GI number: 39996408
Start: 1431807
End: 1433351
Strand: Direct
Name: 39996408
Synonym: GSU1306
Alternate gene names: NA
Gene position: 1431807-1433351 (Clockwise)
Preceding gene: 39996406
Following gene: 39996409
Centisome position: 37.54
GC content: 62.85
Gene sequence:
>1545_bases ATGATGGGAGGATTCACCGTGCTGATCGAGATGCATTGTCATACCTCCGAATACTCCTCCTGCAGCGGCGTTGCGGCCGT GAACCTAGTGCGGCAGGTGGCGGCGAAGAACCTGCAGGGGATCGTTCTTACGGATCACCATCACCTCTGGGAAGCCTCTG AACTGGCCGATGTCCGGCGCCGGGCGGAGGTACCCGACCATTTCGTCATCCTTGCCGGCCAGGAAGTAACCACGCCGGAA CTCGGCGATGTGCTCGTCTTCGGGGCGGATGCGACGATCGAGCGGGGGACTCCGCTGGCTGAAATCCGGCGGCGCTACCC GGCTGCCGCCCTTGTCTGGGCCCATCCCTACCGCAGGGGGAAGCGCCCCACGCCGGAGCAGCTTTGCCATCCGCTGCTGG ACGGTGTGGAGATCTTCAACTCCAACCACACGGTGCGGGAGAACAGTCAGGGGCTCCAGGACTGGCATCGCGACCGGTTC ACTGCCATCGCGGGCACAGATACCCATGGTGAAAACTACGCAGGGCTCTATCCGACCCAGTTCGACCATGCCGTCAAGAC CATCGCCGACCTGGCAGCCGAGATCAGGCACGGCAGGTGTCGGCCGTTCCTGAAGGAGATTCCCCGCTCGGGCGCCAACA GCCAGGTCATCGAGGTGACCATCGGTACCAAGGGGGCCGACGAGGTGCGCGAACGGCTCATCATCAAGGAGATCGGCACC CGGCATAAGTGGCGGTCCGCCGAGCGGGCATTTCGCATCATGGGGGAGATCGTCGGCCACGGCTTCGATGAGGGGAAGTT CAGGGTACCCCGCCCCATCGATGAGGACGAAGCCTCCATGACGCTCATCGAACAGGGCCTGCGCGGAAAATCGCTCTTCG ACAAGCTCCTGACGGCCGAACCGGAGGACGGGAGAGCATACCTGTCACTGGCTGCCGGCTGGCTGGCCCGACTTCATGGC TGCCGCCTCAGGATCACGCCGCGCGATGAATTTCTGGTCCGGGAAGACGAGCGTCTGGCCCGATACCTGGAGCGGTTCAC CGCCATCGGGCACAGGCACACCCGCAAGGTGCAAGAGATTCTCGCTGCGGTGGCGGCAGAGGAGCGGCGGGTGGTGGCGG AGGGGAGTGCGTACATGGTGCAGGGCCATGGCGATTTCCATCCGAAAAACGTGTTCGTGGGCCAGGATGTCATGGAGAAC CGTTCAACCCTGTTCGTGGCGGCAATAGACTTCGAAAGCTCCTACGTGCTTCCCCGCGCCTTTGACGTGGGGTGCTTCCT GGCCCAGTTCCGGAACCAGTTCTATCACTATGGGGAAATAGTGAACGCCTATCCCGAGGAACTGTTCCTGGAAGCCTATC TGCGCGATTCCGATCAGGTGGAGCCGGATTTTCTCCGTCAGGTCGAACTGTTCCGCGCCCGGACCAACATGAGCATCGCT GCCTACCTGGTGAAAGTGGGGCTGGGGGACAGCGAAGACCTGTGGCGGGTGATCGTGGAGGCCGAGCGTTCCATCAGCAA TCTCTCAACCGGCCCTGCCGGCTGA
Upstream 100 bases:
>100_bases TGTACACGGTTGTGTAGGTTGCCTGTAAAACGGGCGGGCCCGGATTGGACGGACCGGTTGTTGTCGGGAGGGGGTCTGGT ATCCTTGTCCTGAGACCACG
Downstream 100 bases:
>100_bases ACTGCCTGGCCTTTCGTTCGTTTTCCGATATACTGATCCCAACTCACCACACTCAAGGAGGAACATCATCCATGCTGAAC ACCGAGATGGCCGCAGCCCT
Product: phosphotransferase domain-containing protein
Products: NA
Alternate protein names: Phosphotransferase Domain-Containing Protein
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MMGGFTVLIEMHCHTSEYSSCSGVAAVNLVRQVAAKNLQGIVLTDHHHLWEASELADVRRRAEVPDHFVILAGQEVTTPE LGDVLVFGADATIERGTPLAEIRRRYPAAALVWAHPYRRGKRPTPEQLCHPLLDGVEIFNSNHTVRENSQGLQDWHRDRF TAIAGTDTHGENYAGLYPTQFDHAVKTIADLAAEIRHGRCRPFLKEIPRSGANSQVIEVTIGTKGADEVRERLIIKEIGT RHKWRSAERAFRIMGEIVGHGFDEGKFRVPRPIDEDEASMTLIEQGLRGKSLFDKLLTAEPEDGRAYLSLAAGWLARLHG CRLRITPRDEFLVREDERLARYLERFTAIGHRHTRKVQEILAAVAAEERRVVAEGSAYMVQGHGDFHPKNVFVGQDVMEN RSTLFVAAIDFESSYVLPRAFDVGCFLAQFRNQFYHYGEIVNAYPEELFLEAYLRDSDQVEPDFLRQVELFRARTNMSIA AYLVKVGLGDSEDLWRVIVEAERSISNLSTGPAG
Sequences:
>Translated_514_residues MMGGFTVLIEMHCHTSEYSSCSGVAAVNLVRQVAAKNLQGIVLTDHHHLWEASELADVRRRAEVPDHFVILAGQEVTTPE LGDVLVFGADATIERGTPLAEIRRRYPAAALVWAHPYRRGKRPTPEQLCHPLLDGVEIFNSNHTVRENSQGLQDWHRDRF TAIAGTDTHGENYAGLYPTQFDHAVKTIADLAAEIRHGRCRPFLKEIPRSGANSQVIEVTIGTKGADEVRERLIIKEIGT RHKWRSAERAFRIMGEIVGHGFDEGKFRVPRPIDEDEASMTLIEQGLRGKSLFDKLLTAEPEDGRAYLSLAAGWLARLHG CRLRITPRDEFLVREDERLARYLERFTAIGHRHTRKVQEILAAVAAEERRVVAEGSAYMVQGHGDFHPKNVFVGQDVMEN RSTLFVAAIDFESSYVLPRAFDVGCFLAQFRNQFYHYGEIVNAYPEELFLEAYLRDSDQVEPDFLRQVELFRARTNMSIA AYLVKVGLGDSEDLWRVIVEAERSISNLSTGPAG >Mature_514_residues MMGGFTVLIEMHCHTSEYSSCSGVAAVNLVRQVAAKNLQGIVLTDHHHLWEASELADVRRRAEVPDHFVILAGQEVTTPE LGDVLVFGADATIERGTPLAEIRRRYPAAALVWAHPYRRGKRPTPEQLCHPLLDGVEIFNSNHTVRENSQGLQDWHRDRF TAIAGTDTHGENYAGLYPTQFDHAVKTIADLAAEIRHGRCRPFLKEIPRSGANSQVIEVTIGTKGADEVRERLIIKEIGT RHKWRSAERAFRIMGEIVGHGFDEGKFRVPRPIDEDEASMTLIEQGLRGKSLFDKLLTAEPEDGRAYLSLAAGWLARLHG CRLRITPRDEFLVREDERLARYLERFTAIGHRHTRKVQEILAAVAAEERRVVAEGSAYMVQGHGDFHPKNVFVGQDVMEN RSTLFVAAIDFESSYVLPRAFDVGCFLAQFRNQFYHYGEIVNAYPEELFLEAYLRDSDQVEPDFLRQVELFRARTNMSIA AYLVKVGLGDSEDLWRVIVEAERSISNLSTGPAG
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57951; Mature: 57951
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGGFTVLIEMHCHTSEYSSCSGVAAVNLVRQVAAKNLQGIVLTDHHHLWEASELADVRR CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHH RAEVPDHFVILAGQEVTTPELGDVLVFGADATIERGTPLAEIRRRYPAAALVWAHPYRRG HHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCEEEEEECHHHCC KRPTPEQLCHPLLDGVEIFNSNHTVRENSQGLQDWHRDRFTAIAGTDTHGENYAGLYPTQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCH FDHAVKTIADLAAEIRHGRCRPFLKEIPRSGANSQVIEVTIGTKGADEVRERLIIKEIGT HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCC RHKWRSAERAFRIMGEIVGHGFDEGKFRVPRPIDEDEASMTLIEQGLRGKSLFDKLLTAE CHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC PEDGRAYLSLAAGWLARLHGCRLRITPRDEFLVREDERLARYLERFTAIGHRHTRKVQEI CCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAAVAAEERRVVAEGSAYMVQGHGDFHPKNVFVGQDVMENRSTLFVAAIDFESSYVLPRA HHHHHHHHCEEEECCCEEEEECCCCCCCCCEEECCHHHCCCCEEEEEEEECCCCCCCCCH FDVGCFLAQFRNQFYHYGEIVNAYPEELFLEAYLRDSDQVEPDFLRQVELFRARTNMSIA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH AYLVKVGLGDSEDLWRVIVEAERSISNLSTGPAG HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMGGFTVLIEMHCHTSEYSSCSGVAAVNLVRQVAAKNLQGIVLTDHHHLWEASELADVRR CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHH RAEVPDHFVILAGQEVTTPELGDVLVFGADATIERGTPLAEIRRRYPAAALVWAHPYRRG HHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHCCCEEEEEECHHHCC KRPTPEQLCHPLLDGVEIFNSNHTVRENSQGLQDWHRDRFTAIAGTDTHGENYAGLYPTQ CCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCH FDHAVKTIADLAAEIRHGRCRPFLKEIPRSGANSQVIEVTIGTKGADEVRERLIIKEIGT HHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCC RHKWRSAERAFRIMGEIVGHGFDEGKFRVPRPIDEDEASMTLIEQGLRGKSLFDKLLTAE CHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCC PEDGRAYLSLAAGWLARLHGCRLRITPRDEFLVREDERLARYLERFTAIGHRHTRKVQEI CCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAAVAAEERRVVAEGSAYMVQGHGDFHPKNVFVGQDVMENRSTLFVAAIDFESSYVLPRA HHHHHHHHCEEEECCCEEEEECCCCCCCCCEEECCHHHCCCCEEEEEEEECCCCCCCCCH FDVGCFLAQFRNQFYHYGEIVNAYPEELFLEAYLRDSDQVEPDFLRQVELFRARTNMSIA HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHH AYLVKVGLGDSEDLWRVIVEAERSISNLSTGPAG HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA