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The map label for this gene is 39996376

Identifier: 39996376

GI number: 39996376

Start: 1389118

End: 1390077

Strand: Direct

Name: 39996376

Synonym: GSU1274

Alternate gene names: NA

Gene position: 1389118-1390077 (Clockwise)

Preceding gene: 39996375

Following gene: 39996377

Centisome position: 36.42

GC content: 62.81

Gene sequence:

>960_bases
GTGGAGCTGGTTTCGCCCACGAGCGAGGGCGATCATAAGGATCGCCCCTACGGAACCATGCGGTATATCGATCTTTATCA
ATCAGGCGAATTATTGCAGCGGGTCAGGGAGGCCTATGCCCGGCTCCGCTCCTGCGACCTCTGCCCCCTTGACTGTGGGG
TGAACCGGCTGGCCGGGGAGACCGGTTCATGCCGGGCAGGGTGGCGGCCCCGGATCGCGTCGGCCAATGTCCACCACGGC
GAAGAGCCCCCCATCTCCGGGACAAAAGGATCGGGGACGATCTTCCTCTCCTGGTGCAGCCTCCACTGCCGGTTCTGCCA
GAACTTTCCCATCAGCCAGCAGGGTAACGGGACCGACCTGACCACGCCGGATCTGGCTGATCGGATGCTTGGGCTGCAGA
AGCGCGGGGTACACAACATCAACTTCGTCACGCCGACCCACTTCCTGCCGCAGATCCTGGCGGCGCTCTGGCTGGCGATT
CCCCGCGGATTCCGGCTTCCGATCGTCTGGAATTCCAGTGGCTACGAGAAGGTGGACGCCCTTCGCCTTCTGGACGGTAT
CGTTGACGTCTATCTGCCGGACATGAAGTATGCGGCGGAAGAACCGGCGGTCCGGTTCTCTTCGGCTCCCGGTTATCGGG
AGGCCAATCGATTGGCGGTTGCCGAGATGTTTCGCCAGGTGGGTCACCTGGAGCTGGACGACGCCGGGATTGCGATACGG
GGGCTCATCATCCGCCACCTCGTTCTACCTGAAGGGGCAGCCGGCAGTGGCGAGACGCTCCGCTGGATTGCCGAAAACTT
GGGTGCCGAGACCCACATCGCCCTGATGAATCAGTTCTTCCCGGCCCACCGGGCCGCGGAGATGCCGGGAATACACCGCA
AGATCACCGATGAGGAATACGACGAGGCGGTGGAAGCTCTGGAAGAGGCCGGGCTGGAAAACGGCTGGGTGCAGGATTAG

Upstream 100 bases:

>100_bases
TTTCGGTCCAGCACCACCCCGAGGCATCGCCCGGCCCCCACGATTCCCACTACCTGTTCGGGCGCTTCGTGGAGTTGATG
GAGAAGGAAAAGGCATAGGG

Downstream 100 bases:

>100_bases
CATGAGAACGATCATTTTGCTGGCGCTGTCCAACGTATTCATGACCTTTGCCTGGTATGCGCACCTGAAGAACCTTAAAG
CGGCGCCCTGGTACATCGCC

Product: radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MELVSPTSEGDHKDRPYGTMRYIDLYQSGELLQRVREAYARLRSCDLCPLDCGVNRLAGETGSCRAGWRPRIASANVHHG
EEPPISGTKGSGTIFLSWCSLHCRFCQNFPISQQGNGTDLTTPDLADRMLGLQKRGVHNINFVTPTHFLPQILAALWLAI
PRGFRLPIVWNSSGYEKVDALRLLDGIVDVYLPDMKYAAEEPAVRFSSAPGYREANRLAVAEMFRQVGHLELDDAGIAIR
GLIIRHLVLPEGAAGSGETLRWIAENLGAETHIALMNQFFPAHRAAEMPGIHRKITDEEYDEAVEALEEAGLENGWVQD

Sequences:

>Translated_319_residues
MELVSPTSEGDHKDRPYGTMRYIDLYQSGELLQRVREAYARLRSCDLCPLDCGVNRLAGETGSCRAGWRPRIASANVHHG
EEPPISGTKGSGTIFLSWCSLHCRFCQNFPISQQGNGTDLTTPDLADRMLGLQKRGVHNINFVTPTHFLPQILAALWLAI
PRGFRLPIVWNSSGYEKVDALRLLDGIVDVYLPDMKYAAEEPAVRFSSAPGYREANRLAVAEMFRQVGHLELDDAGIAIR
GLIIRHLVLPEGAAGSGETLRWIAENLGAETHIALMNQFFPAHRAAEMPGIHRKITDEEYDEAVEALEEAGLENGWVQD
>Mature_319_residues
MELVSPTSEGDHKDRPYGTMRYIDLYQSGELLQRVREAYARLRSCDLCPLDCGVNRLAGETGSCRAGWRPRIASANVHHG
EEPPISGTKGSGTIFLSWCSLHCRFCQNFPISQQGNGTDLTTPDLADRMLGLQKRGVHNINFVTPTHFLPQILAALWLAI
PRGFRLPIVWNSSGYEKVDALRLLDGIVDVYLPDMKYAAEEPAVRFSSAPGYREANRLAVAEMFRQVGHLELDDAGIAIR
GLIIRHLVLPEGAAGSGETLRWIAENLGAETHIALMNQFFPAHRAAEMPGIHRKITDEEYDEAVEALEEAGLENGWVQD

Specific function: Unknown

COG id: COG1313

COG function: function code R; Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35404; Mature: 35404

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVSPTSEGDHKDRPYGTMRYIDLYQSGELLQRVREAYARLRSCDLCPLDCGVNRLAGE
CCCCCCCCCCCCCCCCCCHHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHCCC
TGSCRAGWRPRIASANVHHGEEPPISGTKGSGTIFLSWCSLHCRFCQNFPISQQGNGTDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCC
TTPDLADRMLGLQKRGVHNINFVTPTHFLPQILAALWLAIPRGFRLPIVWNSSGYEKVDA
CCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
LRLLDGIVDVYLPDMKYAAEEPAVRFSSAPGYREANRLAVAEMFRQVGHLELDDAGIAIR
HHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHH
GLIIRHLVLPEGAAGSGETLRWIAENLGAETHIALMNQFFPAHRAAEMPGIHRKITDEEY
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH
DEAVEALEEAGLENGWVQD
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MELVSPTSEGDHKDRPYGTMRYIDLYQSGELLQRVREAYARLRSCDLCPLDCGVNRLAGE
CCCCCCCCCCCCCCCCCCHHHEEHHHHCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHCCC
TGSCRAGWRPRIASANVHHGEEPPISGTKGSGTIFLSWCSLHCRFCQNFPISQQGNGTDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCC
TTPDLADRMLGLQKRGVHNINFVTPTHFLPQILAALWLAIPRGFRLPIVWNSSGYEKVDA
CCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
LRLLDGIVDVYLPDMKYAAEEPAVRFSSAPGYREANRLAVAEMFRQVGHLELDDAGIAIR
HHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHH
GLIIRHLVLPEGAAGSGETLRWIAENLGAETHIALMNQFFPAHRAAEMPGIHRKITDEEY
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHH
DEAVEALEEAGLENGWVQD
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]