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The map label for this gene is 39996350

Identifier: 39996350

GI number: 39996350

Start: 1349931

End: 1350332

Strand: Reverse

Name: 39996350

Synonym: GSU1248

Alternate gene names: NA

Gene position: 1350332-1349931 (Counterclockwise)

Preceding gene: 39996365

Following gene: 39996347

Centisome position: 35.4

GC content: 54.73

Gene sequence:

>402_bases
ATGCCCATAAACAGCACTAAACGAGTTCAAACTCTCCCGGATCAGGGTCGAGGGATACCATCCATGACCGAAGCAGCACT
CATCGCGGCAACATTAGGCCTCACGGCCCCATGGGAAATCAAGGCCATAACCTTTGCCGACACCGAACGGCGCATGGATA
TCACCATTGATTTCTATCATGGGGGAACATTCCGCTGTCCCCGCTGCGGAGCCCACGCCCATGTTTCGGAGTCGGTCCAG
GAAATCTGGCACCGGGAAAATTTCTTTCATTATACAGCCTATCTTCACGTACGCGTACCGCGACTTGCCTGTGAAAAGGA
ATGCGGCACCAGCAATGCGGTGCTACCCTGGGCACAGCGCAATTCCCTTTTCACCCTGATCCCCCTCGTGTTAGGCGTCT
GA

Upstream 100 bases:

>100_bases
TGACAGGGCTCAGGGACTCCCATCCTGCAGCCGGCCTGCCCTAACCTGCGAATCCAGCAGAAAACATGCCATCAGGAATT
CCATGGCACATTTTGTGTAA

Downstream 100 bases:

>100_bases
ACAGGTGTAACATATTTTTCGCCTGTCGCATTTTTTGCGGCTGACGCAAAAAGGGGCCGCATCAGCGGCCCCTTTTCTGT
AGACGTTACCTGCCATGGTA

Product: transposase, ISL3 family, truncation

Products: NA

Alternate protein names: Transposase ISL3 Family Truncation; Transposase-Like; ISAtfe-Like Protein; Transposase ISL3 Family; Truncated Transposase ISL3 Family

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPINSTKRVQTLPDQGRGIPSMTEAALIAATLGLTAPWEIKAITFADTERRMDITIDFYHGGTFRCPRCGAHAHVSESVQ
EIWHRENFFHYTAYLHVRVPRLACEKECGTSNAVLPWAQRNSLFTLIPLVLGV

Sequences:

>Translated_133_residues
MPINSTKRVQTLPDQGRGIPSMTEAALIAATLGLTAPWEIKAITFADTERRMDITIDFYHGGTFRCPRCGAHAHVSESVQ
EIWHRENFFHYTAYLHVRVPRLACEKECGTSNAVLPWAQRNSLFTLIPLVLGV
>Mature_132_residues
PINSTKRVQTLPDQGRGIPSMTEAALIAATLGLTAPWEIKAITFADTERRMDITIDFYHGGTFRCPRCGAHAHVSESVQE
IWHRENFFHYTAYLHVRVPRLACEKECGTSNAVLPWAQRNSLFTLIPLVLGV

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14936; Mature: 14805

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPINSTKRVQTLPDQGRGIPSMTEAALIAATLGLTAPWEIKAITFADTERRMDITIDFYH
CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEC
GGTFRCPRCGAHAHVSESVQEIWHRENFFHYTAYLHVRVPRLACEKECGTSNAVLPWAQR
CCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHCCCCCCCEECCCCC
NSLFTLIPLVLGV
CCHHEEHHHHHCC
>Mature Secondary Structure 
PINSTKRVQTLPDQGRGIPSMTEAALIAATLGLTAPWEIKAITFADTERRMDITIDFYH
CCCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEC
GGTFRCPRCGAHAHVSESVQEIWHRENFFHYTAYLHVRVPRLACEKECGTSNAVLPWAQR
CCEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEECCHHHHHHCCCCCCCEECCCCC
NSLFTLIPLVLGV
CCHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA