Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

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The map label for this gene is agaY [C]

Identifier: 39996347

GI number: 39996347

Start: 1346505

End: 1347599

Strand: Reverse

Name: agaY [C]

Synonym: GSU1245

Alternate gene names: 39996347

Gene position: 1347599-1346505 (Counterclockwise)

Preceding gene: 39996350

Following gene: 39996346

Centisome position: 35.33

GC content: 61.1

Gene sequence:

>1095_bases
ATGAATACTCCTCTTCTTGACCTCGTGCCGGATCATATCCGCAAAAAACTCGGCAACCGGTCGTCCGTATGCCTGCTCAA
CGGTCGCGATATTTTCAGGGCTCTGAGAAATGAACACACGATCCTCATGGCCTGCAACACACGCATCAAACATGTGATCC
CCGGCATCATGCAGGCTGCGGAAGAGCTGGATGCCGTGGTAGCCTTCGAGCTTACGCGCACCGAGGGTGGCGTCGACGGC
GGTTACACGGGCCAGACGCCGGCGGTTTTCTTCGAGACCGTGGTGGACTATGCCGAACGGTGTGGCTTTACCAAACCCTT
CATCATCCACGGCGACCATACCACCGTCCAGAACACCGGATCGCAGGAACTGGAAGAAGCCCGCGCCCTCATGGCCGCCC
AACTGGAAGCGGGCTACACCTCCTTTGCCGTTGATGCCTCGTTCAATCCCTTGCCGGACAACATCCGCATCACCGTCGAC
CTGTGCCGTGCCGTTATGGAGCGGGGGTACGGCCTGGAGGTGGAACTTGGCGAGGTGACCCCCGTCGGCACCGAGTCGAA
TCTGACCACTGCGAGCGAAACGGCGGAATTCCTTTCTGCCCTGGCGGAACAGGGCGTCTACCCCCAACTCCTCGCCATCG
ACAACGGCTCCAAGCGGGGAAACTACCTGGACGGCCAGATTGTACGGATTGACCTCAAGCGAACCAGCGAAATCCACCAG
ACGGCCTTGCGCTTTGGCCTGGACGGATTGGTGCAGCACGGCATCACCGGTACCCCCCTCAAGCTCGTGGGAAAGCTGGC
CGACTACGGCATCAGAAAAGGAAATATCGGCACCCTCTGGCAGAACGTGGCCCATGCCGGGCTTCCCCTGGACCTGATGG
ACGCCATGCGGCGCTGGGCCAAGGAAAACGGTCGGGACATCAAGTTCGCGACCCGGATCTTCAAAGCTGACATCGACGCC
ATTCCCGAGGCGAACGCCCGGCTCATCCACGACATGGCCTACCGGGAGGCCAAGGAATTCCTGCTGGCCTTCCACGCCAG
GGGTAGCGCCTCGCGCATCGCCCCCCTCATCGGACAGGACCAGTGCGGGTCGTAG

Upstream 100 bases:

>100_bases
AACAAAAACATCCCTTGACTAGACATTACGCATCATGTTAAATTTTTAAGCCTTTTTTAAGATTTTACATGTGTATACAC
AAGCCGTTACCCGGATAGAT

Downstream 100 bases:

>100_bases
GCGGAAGCGCCCGGGGCCGTCGCCTGGCCGCACCCCGCGGCAACCGGGTACGCCCCACGGCCGACCGGATCAAGGAGGCT
CTCTTCAACATTCTTCATTC

Product: fructose-bisphosphate aldolase, class-II

Products: Glycerone-Phosphate; D-Glyceraldehyde 3-Phosphate. [C]

Alternate protein names: Ketose-Bisphosphate Aldolase Family Protein; Fructose-Bisphosphate Aldolase; Fructose-Bisphosphate Aldolase Class-II; Fructose/Tagatose Bisphosphate Aldolase-Like Protein; Ketose-Bisphosphate Aldolase Class-II Family Protein; Fructose-16-Bisphosphate Aldolase Class II

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNTPLLDLVPDHIRKKLGNRSSVCLLNGRDIFRALRNEHTILMACNTRIKHVIPGIMQAAEELDAVVAFELTRTEGGVDG
GYTGQTPAVFFETVVDYAERCGFTKPFIIHGDHTTVQNTGSQELEEARALMAAQLEAGYTSFAVDASFNPLPDNIRITVD
LCRAVMERGYGLEVELGEVTPVGTESNLTTASETAEFLSALAEQGVYPQLLAIDNGSKRGNYLDGQIVRIDLKRTSEIHQ
TALRFGLDGLVQHGITGTPLKLVGKLADYGIRKGNIGTLWQNVAHAGLPLDLMDAMRRWAKENGRDIKFATRIFKADIDA
IPEANARLIHDMAYREAKEFLLAFHARGSASRIAPLIGQDQCGS

Sequences:

>Translated_364_residues
MNTPLLDLVPDHIRKKLGNRSSVCLLNGRDIFRALRNEHTILMACNTRIKHVIPGIMQAAEELDAVVAFELTRTEGGVDG
GYTGQTPAVFFETVVDYAERCGFTKPFIIHGDHTTVQNTGSQELEEARALMAAQLEAGYTSFAVDASFNPLPDNIRITVD
LCRAVMERGYGLEVELGEVTPVGTESNLTTASETAEFLSALAEQGVYPQLLAIDNGSKRGNYLDGQIVRIDLKRTSEIHQ
TALRFGLDGLVQHGITGTPLKLVGKLADYGIRKGNIGTLWQNVAHAGLPLDLMDAMRRWAKENGRDIKFATRIFKADIDA
IPEANARLIHDMAYREAKEFLLAFHARGSASRIAPLIGQDQCGS
>Mature_364_residues
MNTPLLDLVPDHIRKKLGNRSSVCLLNGRDIFRALRNEHTILMACNTRIKHVIPGIMQAAEELDAVVAFELTRTEGGVDG
GYTGQTPAVFFETVVDYAERCGFTKPFIIHGDHTTVQNTGSQELEEARALMAAQLEAGYTSFAVDASFNPLPDNIRITVD
LCRAVMERGYGLEVELGEVTPVGTESNLTTASETAEFLSALAEQGVYPQLLAIDNGSKRGNYLDGQIVRIDLKRTSEIHQ
TALRFGLDGLVQHGITGTPLKLVGKLADYGIRKGNIGTLWQNVAHAGLPLDLMDAMRRWAKENGRDIKFATRIFKADIDA
IPEANARLIHDMAYREAKEFLLAFHARGSASRIAPLIGQDQCGS

Specific function: Catalyzes The Reversible Condensation Of Dihydroxyacetone Phosphate With Glyceraldehyde 3-Phosphate To Produce Tagatose 1,6-Bisphosphate. [C]

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.2.- [C]

Molecular weight: Translated: 39876; Mature: 39876

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPLLDLVPDHIRKKLGNRSSVCLLNGRDIFRALRNEHTILMACNTRIKHVIPGIMQAA
CCCCCHHHCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
EELDAVVAFELTRTEGGVDGGYTGQTPAVFFETVVDYAERCGFTKPFIIHGDHTTVQNTG
HHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
SQELEEARALMAAQLEAGYTSFAVDASFNPLPDNIRITVDLCRAVMERGYGLEVELGEVT
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCEEEECCCC
PVGTESNLTTASETAEFLSALAEQGVYPQLLAIDNGSKRGNYLDGQIVRIDLKRTSEIHQ
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHH
TALRFGLDGLVQHGITGTPLKLVGKLADYGIRKGNIGTLWQNVAHAGLPLDLMDAMRRWA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
KENGRDIKFATRIFKADIDAIPEANARLIHDMAYREAKEFLLAFHARGSASRIAPLIGQD
HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
QCGS
CCCC
>Mature Secondary Structure
MNTPLLDLVPDHIRKKLGNRSSVCLLNGRDIFRALRNEHTILMACNTRIKHVIPGIMQAA
CCCCCHHHCHHHHHHHHCCCCCEEEECCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
EELDAVVAFELTRTEGGVDGGYTGQTPAVFFETVVDYAERCGFTKPFIIHGDHTTVQNTG
HHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC
SQELEEARALMAAQLEAGYTSFAVDASFNPLPDNIRITVDLCRAVMERGYGLEVELGEVT
HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHCCCCCEEEECCCC
PVGTESNLTTASETAEFLSALAEQGVYPQLLAIDNGSKRGNYLDGQIVRIDLKRTSEIHQ
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHH
TALRFGLDGLVQHGITGTPLKLVGKLADYGIRKGNIGTLWQNVAHAGLPLDLMDAMRRWA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
KENGRDIKFATRIFKADIDAIPEANARLIHDMAYREAKEFLLAFHARGSASRIAPLIGQD
HCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
QCGS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-Tagatose 1,6-Bisphosphate 1,6-Bisphosphate [C]

Specific reaction: D-Tagatose 1,6-Bisphosphate 1,6-Bisphosphate = Glycerone-Phosphate + D-Glyceraldehyde 3-Phosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA