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The map label for this gene is 39996278

Identifier: 39996278

GI number: 39996278

Start: 1281852

End: 1282514

Strand: Direct

Name: 39996278

Synonym: GSU1176

Alternate gene names: NA

Gene position: 1281852-1282514 (Clockwise)

Preceding gene: 39996275

Following gene: 39996279

Centisome position: 33.61

GC content: 55.2

Gene sequence:

>663_bases
ATGCAACTGTTCACGAGTTCTGTGGGAAGAAAAGTTCTGATGGCGATTACCGGCCAGTTCATGGTTCTGTTCGTCATCGT
CCACATGCTTGGCAACTCATCCATCTTCATCCCCGGAGGCATCAATGCCTACGCGGAGCACCTGCACGCCCTTCCGCCCC
TAGTCTGGGCCTTCCGTCTCGTCATGCTGGTTGCGGCAGGTATCCATATTCTGTTCGGTATCCAGCTGAGCCTTGAGAAC
CGCGCCGCCAACCCCGACACCTATGCGGTCAAGAATTACAAGAAGGCCACCATGGGGAGCCTGAGCATGCTGTACACAGG
CCTCCTTTTGCTGTCCTTCATTATTTATCACCTCCTCCACTTCACCATCCGCGCTACCCCCGACATCAAGCTCGGCGTAG
ACAGCCTGGGCCGTTTCGATGTCTTCGGTATGGTGACCAACAGCTTCTCCCACGGCATTATCGCGTTCATTTACATCGCG
GCCATGGTGGTTCTGTTTCTCCACCTCTCCCACGGAATCCAGAGCTTCTTCCAGACCATGGGGTGGAACAACGACAAGTC
ACTTCCGGTGTTCAGCAAAATCGGCATGATTGCCGCCGTGGTTCTGCTCCTCGGCTATGCGACCATCCCGTTCGTCATCG
TCACCGGCATTCTGAAAGGTTAG

Upstream 100 bases:

>100_bases
TGAGTTTTCCCGTGAGGTCGCCGCGGTCCCGATGTGTGTCGGGCGGCGGTACGTGGTCTGAACCCAAAGAACAACTATCT
ACGCGCAAAGGGAAATCATT

Downstream 100 bases:

>100_bases
GGGGTTCATAGTGATACTCGACGGAAAATGTCCGACAGGGCCAATTGAGAAAACGTGGGACAAGCACCGCTTCGACATGA
AGCTGGTCAACCCCGCCAAC

Product: fumarate reductase, cytochrome b subunit

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Fumarate Reductase Cytochrome B Subunit; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome B Subunit SdhC

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQLFTSSVGRKVLMAITGQFMVLFVIVHMLGNSSIFIPGGINAYAEHLHALPPLVWAFRLVMLVAAGIHILFGIQLSLEN
RAANPDTYAVKNYKKATMGSLSMLYTGLLLLSFIIYHLLHFTIRATPDIKLGVDSLGRFDVFGMVTNSFSHGIIAFIYIA
AMVVLFLHLSHGIQSFFQTMGWNNDKSLPVFSKIGMIAAVVLLLGYATIPFVIVTGILKG

Sequences:

>Translated_220_residues
MQLFTSSVGRKVLMAITGQFMVLFVIVHMLGNSSIFIPGGINAYAEHLHALPPLVWAFRLVMLVAAGIHILFGIQLSLEN
RAANPDTYAVKNYKKATMGSLSMLYTGLLLLSFIIYHLLHFTIRATPDIKLGVDSLGRFDVFGMVTNSFSHGIIAFIYIA
AMVVLFLHLSHGIQSFFQTMGWNNDKSLPVFSKIGMIAAVVLLLGYATIPFVIVTGILKG
>Mature_220_residues
MQLFTSSVGRKVLMAITGQFMVLFVIVHMLGNSSIFIPGGINAYAEHLHALPPLVWAFRLVMLVAAGIHILFGIQLSLEN
RAANPDTYAVKNYKKATMGSLSMLYTGLLLLSFIIYHLLHFTIRATPDIKLGVDSLGRFDVFGMVTNSFSHGIIAFIYIA
AMVVLFLHLSHGIQSFFQTMGWNNDKSLPVFSKIGMIAAVVLLLGYATIPFVIVTGILKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 24135; Mature: 24135

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLFTSSVGRKVLMAITGQFMVLFVIVHMLGNSSIFIPGGINAYAEHLHALPPLVWAFRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCHHHHHHHH
VMLVAAGIHILFGIQLSLENRAANPDTYAVKNYKKATMGSLSMLYTGLLLLSFIIYHLLH
HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTIRATPDIKLGVDSLGRFDVFGMVTNSFSHGIIAFIYIAAMVVLFLHLSHGIQSFFQTM
HHHCCCCCCEECHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWNNDKSLPVFSKIGMIAAVVLLLGYATIPFVIVTGILKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLFTSSVGRKVLMAITGQFMVLFVIVHMLGNSSIFIPGGINAYAEHLHALPPLVWAFRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCHHHHHHHH
VMLVAAGIHILFGIQLSLENRAANPDTYAVKNYKKATMGSLSMLYTGLLLLSFIIYHLLH
HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTIRATPDIKLGVDSLGRFDVFGMVTNSFSHGIIAFIYIAAMVVLFLHLSHGIQSFFQTM
HHHCCCCCCEECHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWNNDKSLPVFSKIGMIAAVVLLLGYATIPFVIVTGILKG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA