Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 39996243

GI number: 39996243

Start: 1231999

End: 1233588

Strand: Direct

Name: trg [C]

Synonym: GSU1141

Alternate gene names: 39996243

Gene position: 1231999-1233588 (Clockwise)

Preceding gene: 39996242

Following gene: 39996244

Centisome position: 32.3

GC content: 59.5

Gene sequence:

>1590_bases
ATGCCGAGAGTGCTCAGCCTCTGGCAGCGTTATCTCGATCTCTCCGTCAATGCCAAATTGATGCTGTATGTGGCCTGCTT
CACCGTCTGGCTCATTTTGGTGGGGGCGGCCGGGTTGTGGGGCATGGGAGTGTTGAGCACCGGCATCAACCGCGACGGGC
TTGCATTGCGGCGTGTGCTTCTGGTGTCCGGGCTCAAGAACGATTTGCTCTACTTGCGCCACGACCTTGATCGCTATTTT
CTCGAAAATGGAAATGCCGCGAGCCGTGCCATACACGATGCCGAACAACGGCTCAAAACCATTGCTGGTGGCATAGAGGC
ACTTGAACGTCACGAGCCCGACGCGGAGCAGCGCAGGCTCCTGGGGGTCTTCGCGCAAGAGTTTGCACTGTATCGCGAAG
CAGTAGTGCGGCTTATTGACCTGCAAAAGCGAGCCCTTGAGACGGGAGATGTCACTGTGCGGTCAGCGGCGGCCTCCTAT
GCCCGAGAGGATATTCTGCCCCTCTTTTTCGGGGCTTCCGATGCGGTAACCGATCTGGTGGAGTTTGATCGCCAGCAGGC
CTTGCAGACCGTAGATGCGAACGGCCTGCAGTATGCCCGGCTTTCACGGGTTCTACCGGCACTGATCGTGGCAGCTGTTA
CACTGGGGCTTTTTTTCGGGATTGTCATTGCCCGTTCCATTACCAAGCCTCTCGCGCGTATTCTCGCTGCGGTCGAATCT
CTTGCCACCGGCAACCTGAACGTGGATGCTCCCGTTGGTGCGCGAGACGATCTTGGCCGGTTGGCCGTGGGAATCAATGC
CATGGTTGGGCGGTTCCGGGACGTTGTGACGTCGATATGCAGAGATAGCGAGGCTGTGGCCGGAGCTGCATCCCAGCTGT
CGGGAACCGCCTGCCAGTTGTCCGAGGCCGCCACAGAGCAGGCTGCCGCTGCGGAAGATGCGTCGTCGAGCATGGAACAG
ATAAGCTCCGCCATCCGGGCGAATGTCCAGAACGCCCAAACAACGGCAGATGTTGCCAACCGGAGTTCCATCGATGCTGC
CGCGGGGGGGGAAACGGTGACGGAAACCGTGGCGTTGATGAAGGAGATCTCCAGAAAGATCATGGTGATTGAGGAGATAG
CTCGTCAAACCAATCTGCTGGCGCTCAACGCCGCCATTGAGGCGGCACGGGCCGGTGACCACGGGAAGGGGTTTGCCGTG
GTTGCCGGTGAAGTCCGTAAACTGGCGGAGCGGAGCCAGTCGGCCGCGGCCGAGATCGGCCGGCTTTCGGTAACGAGCGT
CGAGGTGGCTGAGCGGGCAGGCACCCTGTTCGGCGCCATTATTCCCGATATCCGCCAGACGGCTGAGCTTGTCCAGGGAA
TCAGCTCCGCCTGCCACGAGCAGGAAACCGGCGTTGGCCAGATCAATCGGGCCATACGTCAGCTAGATGCCGTGATTCAG
CAGAATGCTTCGGCTTCCGAGCAGATGGCGTCGACGGCGCAGGAATTGTCATCTCAGGCGGACATGCTGCTTGATGCCGT
CAGTTTCTTTCGACTGGGTGAGACTAACCGGTATCAGGAATCCCGTAGCGAACTATCGGGAATTTCCTGA

Upstream 100 bases:

>100_bases
TTCGAAAAATTCTGAGTGATTGACGTAGGCATGTGTTGGCGGCTCAGCGAGTCGCTTTCGTGACCGGCACTCATTATGAG
AGACAAGGAGGAGCTATCCG

Downstream 100 bases:

>100_bases
GAAGCCTAAAGATTTCCGATTATTCGCCGATATCACAACCAAGCGATATCCACCGGCCCGAGACTCTTTCGTCGGGAGAG
CATATCTGCTGTTCCCGCCC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MPRVLSLWQRYLDLSVNAKLMLYVACFTVWLILVGAAGLWGMGVLSTGINRDGLALRRVLLVSGLKNDLLYLRHDLDRYF
LENGNAASRAIHDAEQRLKTIAGGIEALERHEPDAEQRRLLGVFAQEFALYREAVVRLIDLQKRALETGDVTVRSAAASY
AREDILPLFFGASDAVTDLVEFDRQQALQTVDANGLQYARLSRVLPALIVAAVTLGLFFGIVIARSITKPLARILAAVES
LATGNLNVDAPVGARDDLGRLAVGINAMVGRFRDVVTSICRDSEAVAGAASQLSGTACQLSEAATEQAAAAEDASSSMEQ
ISSAIRANVQNAQTTADVANRSSIDAAAGGETVTETVALMKEISRKIMVIEEIARQTNLLALNAAIEAARAGDHGKGFAV
VAGEVRKLAERSQSAAAEIGRLSVTSVEVAERAGTLFGAIIPDIRQTAELVQGISSACHEQETGVGQINRAIRQLDAVIQ
QNASASEQMASTAQELSSQADMLLDAVSFFRLGETNRYQESRSELSGIS

Sequences:

>Translated_529_residues
MPRVLSLWQRYLDLSVNAKLMLYVACFTVWLILVGAAGLWGMGVLSTGINRDGLALRRVLLVSGLKNDLLYLRHDLDRYF
LENGNAASRAIHDAEQRLKTIAGGIEALERHEPDAEQRRLLGVFAQEFALYREAVVRLIDLQKRALETGDVTVRSAAASY
AREDILPLFFGASDAVTDLVEFDRQQALQTVDANGLQYARLSRVLPALIVAAVTLGLFFGIVIARSITKPLARILAAVES
LATGNLNVDAPVGARDDLGRLAVGINAMVGRFRDVVTSICRDSEAVAGAASQLSGTACQLSEAATEQAAAAEDASSSMEQ
ISSAIRANVQNAQTTADVANRSSIDAAAGGETVTETVALMKEISRKIMVIEEIARQTNLLALNAAIEAARAGDHGKGFAV
VAGEVRKLAERSQSAAAEIGRLSVTSVEVAERAGTLFGAIIPDIRQTAELVQGISSACHEQETGVGQINRAIRQLDAVIQ
QNASASEQMASTAQELSSQADMLLDAVSFFRLGETNRYQESRSELSGIS
>Mature_528_residues
PRVLSLWQRYLDLSVNAKLMLYVACFTVWLILVGAAGLWGMGVLSTGINRDGLALRRVLLVSGLKNDLLYLRHDLDRYFL
ENGNAASRAIHDAEQRLKTIAGGIEALERHEPDAEQRRLLGVFAQEFALYREAVVRLIDLQKRALETGDVTVRSAAASYA
REDILPLFFGASDAVTDLVEFDRQQALQTVDANGLQYARLSRVLPALIVAAVTLGLFFGIVIARSITKPLARILAAVESL
ATGNLNVDAPVGARDDLGRLAVGINAMVGRFRDVVTSICRDSEAVAGAASQLSGTACQLSEAATEQAAAAEDASSSMEQI
SSAIRANVQNAQTTADVANRSSIDAAAGGETVTETVALMKEISRKIMVIEEIARQTNLLALNAAIEAARAGDHGKGFAVV
AGEVRKLAERSQSAAAEIGRLSVTSVEVAERAGTLFGAIIPDIRQTAELVQGISSACHEQETGVGQINRAIRQLDAVIQQ
NASASEQMASTAQELSSQADMLLDAVSFFRLGETNRYQESRSELSGIS

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=386, Percent_Identity=36.0103626943005, Blast_Score=183, Evalue=3e-47,
Organism=Escherichia coli, GI1788195, Length=319, Percent_Identity=38.871473354232, Blast_Score=169, Evalue=4e-43,
Organism=Escherichia coli, GI2367378, Length=343, Percent_Identity=35.8600583090379, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1788194, Length=326, Percent_Identity=35.2760736196319, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1789453, Length=331, Percent_Identity=29.607250755287, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 56551; Mature: 56420

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVLSLWQRYLDLSVNAKLMLYVACFTVWLILVGAAGLWGMGVLSTGINRDGLALRRVL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LVSGLKNDLLYLRHDLDRYFLENGNAASRAIHDAEQRLKTIAGGIEALERHEPDAEQRRL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LGVFAQEFALYREAVVRLIDLQKRALETGDVTVRSAAASYAREDILPLFFGASDAVTDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHH
EFDRQQALQTVDANGLQYARLSRVLPALIVAAVTLGLFFGIVIARSITKPLARILAAVES
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATGNLNVDAPVGARDDLGRLAVGINAMVGRFRDVVTSICRDSEAVAGAASQLSGTACQL
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH
SEAATEQAAAAEDASSSMEQISSAIRANVQNAQTTADVANRSSIDAAAGGETVTETVALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
KEISRKIMVIEEIARQTNLLALNAAIEAARAGDHGKGFAVVAGEVRKLAERSQSAAAEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
RLSVTSVEVAERAGTLFGAIIPDIRQTAELVQGISSACHEQETGVGQINRAIRQLDAVIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QNASASEQMASTAQELSSQADMLLDAVSFFRLGETNRYQESRSELSGIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRVLSLWQRYLDLSVNAKLMLYVACFTVWLILVGAAGLWGMGVLSTGINRDGLALRRVL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LVSGLKNDLLYLRHDLDRYFLENGNAASRAIHDAEQRLKTIAGGIEALERHEPDAEQRRL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LGVFAQEFALYREAVVRLIDLQKRALETGDVTVRSAAASYAREDILPLFFGASDAVTDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHHH
EFDRQQALQTVDANGLQYARLSRVLPALIVAAVTLGLFFGIVIARSITKPLARILAAVES
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LATGNLNVDAPVGARDDLGRLAVGINAMVGRFRDVVTSICRDSEAVAGAASQLSGTACQL
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHH
SEAATEQAAAAEDASSSMEQISSAIRANVQNAQTTADVANRSSIDAAAGGETVTETVALM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
KEISRKIMVIEEIARQTNLLALNAAIEAARAGDHGKGFAVVAGEVRKLAERSQSAAAEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
RLSVTSVEVAERAGTLFGAIIPDIRQTAELVQGISSACHEQETGVGQINRAIRQLDAVIQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QNASASEQMASTAQELSSQADMLLDAVSFFRLGETNRYQESRSELSGIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]