| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cheW-3 [H]
Identifier: 39996244
GI number: 39996244
Start: 1233727
End: 1234221
Strand: Direct
Name: cheW-3 [H]
Synonym: GSU1142
Alternate gene names: 39996244
Gene position: 1233727-1234221 (Clockwise)
Preceding gene: 39996243
Following gene: 39996245
Centisome position: 32.35
GC content: 55.76
Gene sequence:
>495_bases ATGAGCGTTACTACAATCACCGAAACCAGGCAGTATCTTACCTTCAAGCTTGACGATGAGGTGTTTGCCGTTGACGTGGC AAAGGTTCGGGAGATCCTTGAGCTTACCTCCATTACCAAGGTACCGCAGACTCCTCAGTTCATGCGCGGTGTGATCAACC TGCGGGGAAGCGTGGTGCCGGTTGTTGACCTGAGGCTCAAATTCGGCATGTCCGAGACTGCGCCGACCGTCGATACCTGC ATCATCGTTGTTGAAGTGGCCCATGAGCACGAGACGCTCGTCCTCGGCGCCCTGGCCGACTCAGTGCAGGAAGTTTTCGA AATGGAGCCGGGGCAGGTCGAGCCTGCCCCCCGGATCGGAACCAAGCTCAATACCGATTTCATCCTCGGTATGGGAAAAC ACGATGGACAGTTCATCATGATCCTTGATATCGATCGGACTTTCACCAGCGACGAACTTGCAACTGCCGGTTCGGTGTCG GGCGAAGCGGCCTAA
Upstream 100 bases:
>100_bases CCAAGCGATATCCACCGGCCCGAGACTCTTTCGTCGGGAGAGCATATCTGCTGTTCCCGCCCAGGGAGCTTGTGCCATCC ATGCGTTACGGAGGGTTACC
Downstream 100 bases:
>100_bases AAACCGGGTTTCCGGATCATGGATGGAGGGGGGATGTTCAGCGCTGCAACTGACAGGATTACCACGGCGGCTATGACCGA CCGGGAGTTTGCCCGATTCA
Product: purine-binding chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSVTTITETRQYLTFKLDDEVFAVDVAKVREILELTSITKVPQTPQFMRGVINLRGSVVPVVDLRLKFGMSETAPTVDTC IIVVEVAHEHETLVLGALADSVQEVFEMEPGQVEPAPRIGTKLNTDFILGMGKHDGQFIMILDIDRTFTSDELATAGSVS GEAA
Sequences:
>Translated_164_residues MSVTTITETRQYLTFKLDDEVFAVDVAKVREILELTSITKVPQTPQFMRGVINLRGSVVPVVDLRLKFGMSETAPTVDTC IIVVEVAHEHETLVLGALADSVQEVFEMEPGQVEPAPRIGTKLNTDFILGMGKHDGQFIMILDIDRTFTSDELATAGSVS GEAA >Mature_163_residues SVTTITETRQYLTFKLDDEVFAVDVAKVREILELTSITKVPQTPQFMRGVINLRGSVVPVVDLRLKFGMSETAPTVDTCI IVVEVAHEHETLVLGALADSVQEVFEMEPGQVEPAPRIGTKLNTDFILGMGKHDGQFIMILDIDRTFTSDELATAGSVSG EAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=155, Percent_Identity=32.9032258064516, Blast_Score=108, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17910; Mature: 17779
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTITETRQYLTFKLDDEVFAVDVAKVREILELTSITKVPQTPQFMRGVINLRGSVVP CCCEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEE VVDLRLKFGMSETAPTVDTCIIVVEVAHEHETLVLGALADSVQEVFEMEPGQVEPAPRIG EEEEEEECCCCCCCCCHHEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCC TKLNTDFILGMGKHDGQFIMILDIDRTFTSDELATAGSVSGEAA CCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCC >Mature Secondary Structure SVTTITETRQYLTFKLDDEVFAVDVAKVREILELTSITKVPQTPQFMRGVINLRGSVVP CCEEEECCCEEEEEEECCCEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEE VVDLRLKFGMSETAPTVDTCIIVVEVAHEHETLVLGALADSVQEVFEMEPGQVEPAPRIG EEEEEEECCCCCCCCCHHEEEEEEEECCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCC TKLNTDFILGMGKHDGQFIMILDIDRTFTSDELATAGSVSGEAA CCCCCEEEEEECCCCCCEEEEEECCCCCCCCHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]