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The map label for this gene is 39996228

Identifier: 39996228

GI number: 39996228

Start: 1210532

End: 1211239

Strand: Direct

Name: 39996228

Synonym: GSU1126

Alternate gene names: NA

Gene position: 1210532-1211239 (Clockwise)

Preceding gene: 39996226

Following gene: 39996229

Centisome position: 31.74

GC content: 66.53

Gene sequence:

>708_bases
GTGATCGCTTCCCTGCGCCGCTATCTGGAGGAAGTCCGGGAGACGGGTGTAGAGGGCCTCCCTCTGGCCGCTCCCGCGCC
GAGTGTCTCTGCGGCGGAGGCGTCCTCTGCGTCTGCCGTTTTCGGTGACGCGCGGGAAACCCTGGACGATATCCGGCGTG
AGATGGGGGGGTGTCACCGGTGCGCCCTTGGCGCCGGCCGGACTAATCTCGTGTTCGGGGTCGGCAATCCCGCCGCGCGC
CTCATGATTATCGGCGAGGCGCCCGGTCGCGACGAGGATCTGCGCGGCGAGCCCTTCGTGGGGGAGGCGGGGCAGCTCCT
GACCAAAATCATTGAGGCCATGGGCTTCGCCCGCGAGGACGTCTACATCTGCAACGTGCTCAAATGCCGGCCGCCGCACA
ACCGCGATCCGGCATCCGCCGAGATCGAGGCGTGCTCATCCTTCATGCTCCGCCAGGTGAAGGCCGTGGCGCCCGAGGCC
ATTCTGGCACTGGGCACCTTTGCGGCCCAGACCATCCTTGGTACCAAGGAGCCCATTTCGCGGCTGCGGGGACGGTTCCA
CGACTATCACGGCATCCCTCTCATGCCGACGCTTCATCCGGCTTTCCTGCTGCGTAACCCCGAAAGGAAGAGGGACGTGT
GGGACGATGTCCGGCAGGTCATGGGGCTTCTGGGCAAGGAGGTCCCCGGCAAGGGGGACAGGAGGTGA

Upstream 100 bases:

>100_bases
TGATGATGAGCAGAATGGCGGCGAAGAGCATTGCATAATCGTATTGAACCCTTAGAAAAAAGTAAAGGAGTTTGCCGTGA
CCGGTGACACGCCGCGTGAG

Downstream 100 bases:

>100_bases
CGGGGAATGGCTAAGGGATACCAGGCAAACAGGGAACGGCTGGAGCAGATAGGCTTGTTGGGCAAGGCGCTCGCCAAACG
GGCCGGCTTCGCCTGCGAAT

Product: phage shock protein E

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein Bacteriophage-Type; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Bacteriophage-Related DNA Polymerase; Phage DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MIASLRRYLEEVRETGVEGLPLAAPAPSVSAAEASSASAVFGDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAAR
LMIIGEAPGRDEDLRGEPFVGEAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEA
ILALGTFAAQTILGTKEPISRLRGRFHDYHGIPLMPTLHPAFLLRNPERKRDVWDDVRQVMGLLGKEVPGKGDRR

Sequences:

>Translated_235_residues
MIASLRRYLEEVRETGVEGLPLAAPAPSVSAAEASSASAVFGDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAAR
LMIIGEAPGRDEDLRGEPFVGEAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEA
ILALGTFAAQTILGTKEPISRLRGRFHDYHGIPLMPTLHPAFLLRNPERKRDVWDDVRQVMGLLGKEVPGKGDRR
>Mature_235_residues
MIASLRRYLEEVRETGVEGLPLAAPAPSVSAAEASSASAVFGDARETLDDIRREMGGCHRCALGAGRTNLVFGVGNPAAR
LMIIGEAPGRDEDLRGEPFVGEAGQLLTKIIEAMGFAREDVYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEA
ILALGTFAAQTILGTKEPISRLRGRFHDYHGIPLMPTLHPAFLLRNPERKRDVWDDVRQVMGLLGKEVPGKGDRR

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 25538; Mature: 25538

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASLRRYLEEVRETGVEGLPLAAPAPSVSAAEASSASAVFGDARETLDDIRREMGGCHR
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH
CALGAGRTNLVFGVGNPAARLMIIGEAPGRDEDLRGEPFVGEAGQLLTKIIEAMGFARED
HHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
VYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEAILALGTFAAQTILGTKEPIS
CEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHH
RLRGRFHDYHGIPLMPTLHPAFLLRNPERKRDVWDDVRQVMGLLGKEVPGKGDRR
HHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIASLRRYLEEVRETGVEGLPLAAPAPSVSAAEASSASAVFGDARETLDDIRREMGGCHR
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCHHH
CALGAGRTNLVFGVGNPAARLMIIGEAPGRDEDLRGEPFVGEAGQLLTKIIEAMGFARED
HHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
VYICNVLKCRPPHNRDPASAEIEACSSFMLRQVKAVAPEAILALGTFAAQTILGTKEPIS
CEEEHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHH
RLRGRFHDYHGIPLMPTLHPAFLLRNPERKRDVWDDVRQVMGLLGKEVPGKGDRR
HHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA