| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996229
Identifier: 39996229
GI number: 39996229
Start: 1211246
End: 1211626
Strand: Direct
Name: 39996229
Synonym: GSU1127
Alternate gene names: NA
Gene position: 1211246-1211626 (Clockwise)
Preceding gene: 39996228
Following gene: 39996230
Centisome position: 31.76
GC content: 64.3
Gene sequence:
>381_bases ATGGCTAAGGGATACCAGGCAAACAGGGAACGGCTGGAGCAGATAGGCTTGTTGGGCAAGGCGCTCGCCAAACGGGCCGG CTTCGCCTGCGAATGGTGCGAGGGGAAGGATGACCTGCGCCCGTGGGACTACCAACCTGACGACGAACCGTCGGAGGAAA CACTGGCGCTTCTTTGCGGCAGGTGCCGGGAACTCGCCGGAGGCCGCAGGGGTGATGCCCATGAGCTGCGCGGAATTCGC AATGCCCTGTGGAGTCAGGTGCCGGCCGTTGCCGAAGGGGCCGCCCGGGTCCTGGCCACGAGCAGGGAGCCCTGGGTGCG CGAAGCCATCGAGGAGAGTCTCATCGACGAGACGGTAAAGGCGGAGATACTGGGAATCTAA
Upstream 100 bases:
>100_bases TAACCCCGAAAGGAAGAGGGACGTGTGGGACGATGTCCGGCAGGTCATGGGGCTTCTGGGCAAGGAGGTCCCCGGCAAGG GGGACAGGAGGTGACGGGGA
Downstream 100 bases:
>100_bases GGGGCTGACCGCCGGCGCGTGAGAAGAGGGGAGGCCTGACAGGTGTCCCGGAGGTGGAAGGATATGTACGAGCATCTCTA TGAAGAGCCCATGACCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MAKGYQANRERLEQIGLLGKALAKRAGFACEWCEGKDDLRPWDYQPDDEPSEETLALLCGRCRELAGGRRGDAHELRGIR NALWSQVPAVAEGAARVLATSREPWVREAIEESLIDETVKAEILGI
Sequences:
>Translated_126_residues MAKGYQANRERLEQIGLLGKALAKRAGFACEWCEGKDDLRPWDYQPDDEPSEETLALLCGRCRELAGGRRGDAHELRGIR NALWSQVPAVAEGAARVLATSREPWVREAIEESLIDETVKAEILGI >Mature_125_residues AKGYQANRERLEQIGLLGKALAKRAGFACEWCEGKDDLRPWDYQPDDEPSEETLALLCGRCRELAGGRRGDAHELRGIRN ALWSQVPAVAEGAARVLATSREPWVREAIEESLIDETVKAEILGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13990; Mature: 13859
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGYQANRERLEQIGLLGKALAKRAGFACEWCEGKDDLRPWDYQPDDEPSEETLALLCG CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RCRELAGGRRGDAHELRGIRNALWSQVPAVAEGAARVLATSREPWVREAIEESLIDETVK HHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AEILGI HHHCCC >Mature Secondary Structure AKGYQANRERLEQIGLLGKALAKRAGFACEWCEGKDDLRPWDYQPDDEPSEETLALLCG CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH RCRELAGGRRGDAHELRGIRNALWSQVPAVAEGAARVLATSREPWVREAIEESLIDETVK HHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AEILGI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA