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The map label for this gene is 39996209

Identifier: 39996209

GI number: 39996209

Start: 1193646

End: 1194185

Strand: Reverse

Name: 39996209

Synonym: GSU1107

Alternate gene names: NA

Gene position: 1194185-1193646 (Counterclockwise)

Preceding gene: 39996211

Following gene: 39996204

Centisome position: 31.31

GC content: 51.48

Gene sequence:

>540_bases
ATGCCGAGACTAACCGACGACGACAAGAAGCTCTTACTTATGTTAGCCAGGGAAGCCATAGTTACCTATGTCAGAGAGGG
CATTACACCAGCCACGGAACTCTCCGTACCGAGCCTGTGCGAACACTATGGTTGTTTTGTCTGCATCAAAAAAGGTGGAG
AATTGCGCGGCTGCATCGGCAATTTCACCTCCAGCCAACCACTGTACCAACTGGTCAGGGAGATGGCAGTATCCGCCGCA
ACCCGTGATCCGCGCTTTTATCCGATGACCAGCAAAGATATCACGGATTTCTCCCTGGAAATTTCCGTTTTGAGCCCCTT
GGAAAAAATATCCTCCCCCGAACAGATTACTGTGGGAACCCACGGCATCTACATTGAGAAAAATTTCTTTCGTGGAGTGC
TCCTGCCCCAAGTCGCCACGGAATACGGCTGGGACCGCGATACTTTCCTTATGCAAACGTGTGTGAAGGCCGGTCTCAAG
CCTGACGATTGGCGGGATGGGGCTGACATATACATTTTCAGCGCAGAGGTGTTCAGCTGA

Upstream 100 bases:

>100_bases
CTGAAGAACGTTCATAGTATAGTTCACAAGATGTCACAGCATGAGCAGGTTCGTTCGCAGCCTTACCGCCGTTAACCTAA
TGCTCCAACAGAGGATAAAC

Downstream 100 bases:

>100_bases
CATCGACAGCAGAGCCACCTGAAGCGGGAACGAATAGAAAAAATGGGGAGACGCGGTGACATCTCCCCATTTTCTATTTG
ACTTACAGCAGAAGTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPRLTDDDKKLLLMLAREAIVTYVREGITPATELSVPSLCEHYGCFVCIKKGGELRGCIGNFTSSQPLYQLVREMAVSAA
TRDPRFYPMTSKDITDFSLEISVLSPLEKISSPEQITVGTHGIYIEKNFFRGVLLPQVATEYGWDRDTFLMQTCVKAGLK
PDDWRDGADIYIFSAEVFS

Sequences:

>Translated_179_residues
MPRLTDDDKKLLLMLAREAIVTYVREGITPATELSVPSLCEHYGCFVCIKKGGELRGCIGNFTSSQPLYQLVREMAVSAA
TRDPRFYPMTSKDITDFSLEISVLSPLEKISSPEQITVGTHGIYIEKNFFRGVLLPQVATEYGWDRDTFLMQTCVKAGLK
PDDWRDGADIYIFSAEVFS
>Mature_178_residues
PRLTDDDKKLLLMLAREAIVTYVREGITPATELSVPSLCEHYGCFVCIKKGGELRGCIGNFTSSQPLYQLVREMAVSAAT
RDPRFYPMTSKDITDFSLEISVLSPLEKISSPEQITVGTHGIYIEKNFFRGVLLPQVATEYGWDRDTFLMQTCVKAGLKP
DDWRDGADIYIFSAEVFS

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

Organism=Homo sapiens, GI284413707, Length=127, Percent_Identity=36.2204724409449, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI7669554, Length=127, Percent_Identity=36.2204724409449, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI42544151, Length=125, Percent_Identity=36, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI281362408, Length=131, Percent_Identity=35.8778625954198, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24649478, Length=131, Percent_Identity=35.8778625954198, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24649480, Length=131, Percent_Identity=35.8778625954198, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 20102; Mature: 19971

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLTDDDKKLLLMLAREAIVTYVREGITPATELSVPSLCEHYGCFVCIKKGGELRGCIG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCEEEEEECCCCEEHHHC
NFTSSQPLYQLVREMAVSAATRDPRFYPMTSKDITDFSLEISVLSPLEKISSPEQITVGT
CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEHHHHHHHHCCCCCEEEECC
HGIYIEKNFFRGVLLPQVATEYGWDRDTFLMQTCVKAGLKPDDWRDGADIYIFSAEVFS
CEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
PRLTDDDKKLLLMLAREAIVTYVREGITPATELSVPSLCEHYGCFVCIKKGGELRGCIG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHCCEEEEEECCCCEEHHHC
NFTSSQPLYQLVREMAVSAATRDPRFYPMTSKDITDFSLEISVLSPLEKISSPEQITVGT
CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEHHHHHHHHCCCCCEEEECC
HGIYIEKNFFRGVLLPQVATEYGWDRDTFLMQTCVKAGLKPDDWRDGADIYIFSAEVFS
CEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA