| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996186
Identifier: 39996186
GI number: 39996186
Start: 1169921
End: 1170640
Strand: Direct
Name: 39996186
Synonym: GSU1084
Alternate gene names: NA
Gene position: 1169921-1170640 (Clockwise)
Preceding gene: 39996185
Following gene: 39996187
Centisome position: 30.67
GC content: 68.33
Gene sequence:
>720_bases GTGACCATCGCCTGCCCCCAGTGCGGCGCCACGGCCGAAGCCCGCACCGATACCCGTTTCCACGGCTGTGCCTTCTGCGG TTCATCCTTCATGGTGGAACGGGGTGTCGGCATCGCCGAATACCACCTGGACCACGAGCGGGACGATCGGGTGGCGTGGA GCGCAGTGGCCTCCACCCTCGAGCGGGATGGTGCCGGACAGGCCGTGGAGCGGACCGGCTGCGAGTATCTGGTTGCGCCC TTCTGGCTCTCGCGACCTGAAAGTGGAGGGAATCGGCTCGTGCCGGCCCTGCGTCATCCCTGGCTTCAGGGTCCCCTCCC CGGCCTGCCCGGCGGCGACCTTCTCTTCGTCCCGTCGGGGGACGACTTCATCCTGCCCGACATCCCGGCCGACGAGGCAT TAGGGGAAGGAGCCGACCGTGGCGGCACCTCCCTCAGCCTCGTTTACCTCCCTCTCTATCTCCTTTCCTTCCGCCTTGCC GGTCACGACTGCAGGGCACTGGTTTCGGCGGTGGACCGGCGGGTCGCGCTCCTGACGCCCCTCCCGGCCCGGTCCGAGTC GGTGCCGTTTCGCCACGCTGCACTGGTGGCCGGTTTTGCCATCACGCTCACTGCCTCCGGGCTGGCCGTGAAGAGCCACT TTCTCAGGGCAGCCGTCTTCGCGGCTGTGCTGGCCGTTGCCTGGCCGGTCTGCACCGCATTGCTCCGACGGGGGGAGTAA
Upstream 100 bases:
>100_bases CGCCCCGGTAGAGTCCGGCTTTTGCTCCGGCTGCGGCAAGCCGCTGCCGACAGAAGCTCGCTTCTGCCCCGGCTGCGGAC GGCAGGCCGGAGCATAGGCG
Downstream 100 bases:
>100_bases TGAGCGAGCGGCAGACGGTCACCATATCCTGTCCCCAGTGTGCAAGCCCCTTTTCGTTCAGCGAAGGCAACCGCAATGCT CTCTGTCCCTCTTGCGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTIACPQCGATAEARTDTRFHGCAFCGSSFMVERGVGIAEYHLDHERDDRVAWSAVASTLERDGAGQAVERTGCEYLVAP FWLSRPESGGNRLVPALRHPWLQGPLPGLPGGDLLFVPSGDDFILPDIPADEALGEGADRGGTSLSLVYLPLYLLSFRLA GHDCRALVSAVDRRVALLTPLPARSESVPFRHAALVAGFAITLTASGLAVKSHFLRAAVFAAVLAVAWPVCTALLRRGE
Sequences:
>Translated_239_residues MTIACPQCGATAEARTDTRFHGCAFCGSSFMVERGVGIAEYHLDHERDDRVAWSAVASTLERDGAGQAVERTGCEYLVAP FWLSRPESGGNRLVPALRHPWLQGPLPGLPGGDLLFVPSGDDFILPDIPADEALGEGADRGGTSLSLVYLPLYLLSFRLA GHDCRALVSAVDRRVALLTPLPARSESVPFRHAALVAGFAITLTASGLAVKSHFLRAAVFAAVLAVAWPVCTALLRRGE >Mature_238_residues TIACPQCGATAEARTDTRFHGCAFCGSSFMVERGVGIAEYHLDHERDDRVAWSAVASTLERDGAGQAVERTGCEYLVAPF WLSRPESGGNRLVPALRHPWLQGPLPGLPGGDLLFVPSGDDFILPDIPADEALGEGADRGGTSLSLVYLPLYLLSFRLAG HDCRALVSAVDRRVALLTPLPARSESVPFRHAALVAGFAITLTASGLAVKSHFLRAAVFAAVLAVAWPVCTALLRRGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25433; Mature: 25302
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIACPQCGATAEARTDTRFHGCAFCGSSFMVERGVGIAEYHLDHERDDRVAWSAVASTL CEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEHCCCCCCCHHHHHHHHHHHH ERDGAGQAVERTGCEYLVAPFWLSRPESGGNRLVPALRHPWLQGPLPGLPGGDLLFVPSG HHCCCCCHHHHCCCCEEECCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECC DDFILPDIPADEALGEGADRGGTSLSLVYLPLYLLSFRLAGHDCRALVSAVDRRVALLTP CCEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECC LPARSESVPFRHAALVAGFAITLTASGLAVKSHFLRAAVFAAVLAVAWPVCTALLRRGE CCCCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIACPQCGATAEARTDTRFHGCAFCGSSFMVERGVGIAEYHLDHERDDRVAWSAVASTL EEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEEHCCCCCCCHHHHHHHHHHHH ERDGAGQAVERTGCEYLVAPFWLSRPESGGNRLVPALRHPWLQGPLPGLPGGDLLFVPSG HHCCCCCHHHHCCCCEEECCHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEECC DDFILPDIPADEALGEGADRGGTSLSLVYLPLYLLSFRLAGHDCRALVSAVDRRVALLTP CCEECCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEECC LPARSESVPFRHAALVAGFAITLTASGLAVKSHFLRAAVFAAVLAVAWPVCTALLRRGE CCCCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA