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The map label for this gene is ydjI [H]

Identifier: 39996185

GI number: 39996185

Start: 1168841

End: 1169917

Strand: Direct

Name: ydjI [H]

Synonym: GSU1083

Alternate gene names: 39996185

Gene position: 1168841-1169917 (Clockwise)

Preceding gene: 39996184

Following gene: 39996186

Centisome position: 30.64

GC content: 65.27

Gene sequence:

>1077_bases
ATGCGAACGGAGGGCCCCGTGGCGATCAACAGCATGAATACGGTATTTCTTGAGGTAGTCGAGTGGTTTGACGACAGCGG
CCGGGAGATGGTGCGCCGCATCCCCCCCGAGGGGTCCGCCGAGATCAAATTGGGCGCCCAGCTGGTGGTGCGGGAGAGTC
AGCGGGCGGTCTTCTTCAGGGACGGCAAGGCCGCCGACTGCTTTGGCCCCGGTAGGCATACCCTGACCAGCGCCAACCTG
CCGATCCTGACTAAGCTCCTGTCGCTCCCCTGGGGAGGCACCTCTCCCTTCCGCTGCGAAGTCTGTTTCGTGGGAATACA
GACCTTCACCGACCTGCGCTGGGGAACCAAGGAACCCGTTGCCTTCCGGGACAGCCGCTTTGGCATGGTACGGCTGCGGG
CCTTCGGCACCTACACCCTGCGGGTGGTCGACCCGCAGCTCCTGGTGAACGCTCTGGTGGGAACCCGGGGGCTTTACACC
AGCAGCGAGCTGGAGGAACTGTTCCGCGACATCATCGTGGCGCGGCTCAACGACTACCTGGGCGAAACCATCGACTCGGT
TCTGGATCTGCCCGCCCGCTACGATGAGACTTCTGCTGCGCTCAAGGAACGCCTGGCAGGAGACTTCGGAGGATTCGGCA
TCGAACTGGCCGAACTTTACGTGAACGCGATCACTCCCCCGCCGGAGGTCCAGAAGGCAATCGACGAGCGCACCTCCATG
GAGGCGGCCGGCGATGTGGATCGCTACCTGAAGTTCAAGGCGGCCCGAAGCCTGGAAGCGGCGGCCTCGGCCGAGGGGGG
CGGCGAGGCTGCCCAGGGGATGGGGATCGGGGTCGGTGCCGGTCTCGGCATGATTCTCCCCGGTATGGTGGCGAATGCCA
TGGCACAGGGAGCTGATGCGTCCGCTCCTGTCGGCACGGGTAGCTGTCCCCGCTGTATGGCGCCGTTGGTGGCGGGTGGA
AATTTTTGCCATCAGTGCGGCGCCCCGGTAGAGTCCGGCTTTTGCTCCGGCTGCGGCAAGCCGCTGCCGACAGAAGCTCG
CTTCTGCCCCGGCTGCGGACGGCAGGCCGGAGCATAG

Upstream 100 bases:

>100_bases
ATAAGCCGTTCCTGCTGAAATTCCTCAAGTTTCACCACTTCTAACCGATAGATGCTACAGCTGCTTCGATCTAAAAGCGG
TCGTTGTCGCGAGCGTCATT

Downstream 100 bases:

>100_bases
GCGGTGACCATCGCCTGCCCCCAGTGCGGCGCCACGGCCGAAGCCCGCACCGATACCCGTTTCCACGGCTGTGCCTTCTG
CGGTTCATCCTTCATGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MRTEGPVAINSMNTVFLEVVEWFDDSGREMVRRIPPEGSAEIKLGAQLVVRESQRAVFFRDGKAADCFGPGRHTLTSANL
PILTKLLSLPWGGTSPFRCEVCFVGIQTFTDLRWGTKEPVAFRDSRFGMVRLRAFGTYTLRVVDPQLLVNALVGTRGLYT
SSELEELFRDIIVARLNDYLGETIDSVLDLPARYDETSAALKERLAGDFGGFGIELAELYVNAITPPPEVQKAIDERTSM
EAAGDVDRYLKFKAARSLEAAASAEGGGEAAQGMGIGVGAGLGMILPGMVANAMAQGADASAPVGTGSCPRCMAPLVAGG
NFCHQCGAPVESGFCSGCGKPLPTEARFCPGCGRQAGA

Sequences:

>Translated_358_residues
MRTEGPVAINSMNTVFLEVVEWFDDSGREMVRRIPPEGSAEIKLGAQLVVRESQRAVFFRDGKAADCFGPGRHTLTSANL
PILTKLLSLPWGGTSPFRCEVCFVGIQTFTDLRWGTKEPVAFRDSRFGMVRLRAFGTYTLRVVDPQLLVNALVGTRGLYT
SSELEELFRDIIVARLNDYLGETIDSVLDLPARYDETSAALKERLAGDFGGFGIELAELYVNAITPPPEVQKAIDERTSM
EAAGDVDRYLKFKAARSLEAAASAEGGGEAAQGMGIGVGAGLGMILPGMVANAMAQGADASAPVGTGSCPRCMAPLVAGG
NFCHQCGAPVESGFCSGCGKPLPTEARFCPGCGRQAGA
>Mature_358_residues
MRTEGPVAINSMNTVFLEVVEWFDDSGREMVRRIPPEGSAEIKLGAQLVVRESQRAVFFRDGKAADCFGPGRHTLTSANL
PILTKLLSLPWGGTSPFRCEVCFVGIQTFTDLRWGTKEPVAFRDSRFGMVRLRAFGTYTLRVVDPQLLVNALVGTRGLYT
SSELEELFRDIIVARLNDYLGETIDSVLDLPARYDETSAALKERLAGDFGGFGIELAELYVNAITPPPEVQKAIDERTSM
EAAGDVDRYLKFKAARSLEAAASAEGGGEAAQGMGIGVGAGLGMILPGMVANAMAQGADASAPVGTGSCPRCMAPLVAGG
NFCHQCGAPVESGFCSGCGKPLPTEARFCPGCGRQAGA

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 38043; Mature: 38043

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTEGPVAINSMNTVFLEVVEWFDDSGREMVRRIPPEGSAEIKLGAQLVVRESQRAVFFR
CCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCEEEEECCCCEEEEE
DGKAADCFGPGRHTLTSANLPILTKLLSLPWGGTSPFRCEVCFVGIQTFTDLRWGTKEPV
CCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCC
AFRDSRFGMVRLRAFGTYTLRVVDPQLLVNALVGTRGLYTSSELEELFRDIIVARLNDYL
EECCCCCCEEEEEEECEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GETIDSVLDLPARYDETSAALKERLAGDFGGFGIELAELYVNAITPPPEVQKAIDERTSM
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EAAGDVDRYLKFKAARSLEAAASAEGGGEAAQGMGIGVGAGLGMILPGMVANAMAQGADA
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
SAPVGTGSCPRCMAPLVAGGNFCHQCGAPVESGFCSGCGKPLPTEARFCPGCGRQAGA
CCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTEGPVAINSMNTVFLEVVEWFDDSGREMVRRIPPEGSAEIKLGAQLVVRESQRAVFFR
CCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCEEEEECCCCEEEEE
DGKAADCFGPGRHTLTSANLPILTKLLSLPWGGTSPFRCEVCFVGIQTFTDLRWGTKEPV
CCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCC
AFRDSRFGMVRLRAFGTYTLRVVDPQLLVNALVGTRGLYTSSELEELFRDIIVARLNDYL
EECCCCCCEEEEEEECEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
GETIDSVLDLPARYDETSAALKERLAGDFGGFGIELAELYVNAITPPPEVQKAIDERTSM
HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EAAGDVDRYLKFKAARSLEAAASAEGGGEAAQGMGIGVGAGLGMILPGMVANAMAQGADA
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
SAPVGTGSCPRCMAPLVAGGNFCHQCGAPVESGFCSGCGKPLPTEARFCPGCGRQAGA
CCCCCCCCCHHHHHHHHHCCCHHHHCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]