| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39996169
Identifier: 39996169
GI number: 39996169
Start: 1154621
End: 1156018
Strand: Reverse
Name: 39996169
Synonym: GSU1067
Alternate gene names: NA
Gene position: 1156018-1154621 (Counterclockwise)
Preceding gene: 308513293
Following gene: 39996163
Centisome position: 30.31
GC content: 59.51
Gene sequence:
>1398_bases TTGCTGCTCTGGCTTTCCCGAGCCGGCGTTCCGAGGAAATGTTCGACGAACTGTACGTCCGCCAGAACACCGGCATTGGC ATCGCCAAAGCGGTGGACCACTAACGGACTGTCAACAAATCAAACATTGTGTTACACTCTGGGGGAAGGTCAGCCTTCCC CCTTTTTTTACCTTCGGAGCGCCCGAAAGATGCCCCAGAGCGTCGAACAGCACATAGCCGCCATTACTGATCGGATCAAG GATTTCGTCCGGTTTCTGGACCGGGAGGAAGTGGCTCCGGTACTGGCGGAATTGCGGGAGATGTTCGCCCGTGAGTTGCG GGCAACGGAAGGGTTTGCTTCCCACGAGCGCGAACTCCACGACCGGATTCGCCACGAATCCGATTACGAGCAGTTGCGGG CCATCCATGACGAACTGAACGTGCTGGAAATGGAACGATTCCTCGCCATCAGCTCCGTGTCGGCTCTGCACGCCAATTGT ACGGAATACCGGGACATCCTGGCCGATCGAGCCCTCGCCCTGGCTGAAGACGAAATGGAGCACGACGGTCGCGGCCGTGC CCCGTGCCCCTATGCCCTCTGCAGCATGGGAAGCGACGGCCGTGAGGAGCAGACCCTCATCACGGACCAGGATTACCTGA TTGTTTATGGGGACGGGGGCGGTGAGGCAGCCGATGAATGGTTCCGGGAGTTCTCGGAGCTGATCGTGGAGCGACTGGCA CAGATCGGGTTCAAGAAGTGCACCGGCGACATCATGCCGTCGAACCCCACATGGCGCGGCTCGCTCTCCCAATGGCGGCG CAAGCTTCTGGCCATCGTCCGCTACGAATACGAGGACTACGCCAAGAATCTCATGGATCTGATCGTGATCTCCGACGCGC GGCACGTGGCCGGCGACCGGGACCTGGCGGCGACACTCATCGCCACCATCAGGGCGTTGGAAAAGGATTATTTCCAGGTG CTCTGGGGCATGGCCAAGGCAGCCACGGAAATGAAGCTGGCTCTGGGATTTCTCAAACGACTCTGGACCGAGGGATCGGG GGAGCACAAGGGGGAGTTCAACCTGAAGCTGCTGGCCTGGGCGCCGCTGGTGATGAACGTGCGCATCCTTGCCATCAACC AGGGGGTGCCGGCCACCAATACCGTGAAACGGATTGAGCACCTGGCCCGGGAGGGGAGTTTCTCTCCCTCGTTTGCTAAC GGACTCGTGGAAGCCTATGAGGTACTCACCCGCCACCGGATTCTTCTTCAGATCAAGGTCATCAAGGGGATTCAGAAGAG CTCCTACTACCTGAATCCCTATACCCTCCCAGCCGAAGAGCGTGAAGCGATCCGTCAGGCCCTGCTCCGGATCGAGGACC TGCAGCGGACCATCCACACCAACTTCTCGATCATGTAG
Upstream 100 bases:
>100_bases AACAAGGACGGCAAATCGTTCCTCGGTCTCGACAAGCCCCTCTTCGCGTTGAAGAATCCAGGCGTAGTGTCCATCCCGCT GGGCTTCATCGCCGCGGTCA
Downstream 100 bases:
>100_bases CGCCGTCACTTGAGCTGGCGCCAGCTTCGCAGGCCGATCTGGCTATGCCCGCCCCCCTCCAGCAGTTTGATGATTTCCCC CGTGGTCTTGGTGATGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; Endonuclease/Nucleotidyltransferase; CBS Signal-Transduction Protein; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MLLWLSRAGVPRKCSTNCTSARTPALASPKRWTTNGLSTNQTLCYTLGEGQPSPFFYLRSARKMPQSVEQHIAAITDRIK DFVRFLDREEVAPVLAELREMFARELRATEGFASHERELHDRIRHESDYEQLRAIHDELNVLEMERFLAISSVSALHANC TEYRDILADRALALAEDEMEHDGRGRAPCPYALCSMGSDGREEQTLITDQDYLIVYGDGGGEAADEWFREFSELIVERLA QIGFKKCTGDIMPSNPTWRGSLSQWRRKLLAIVRYEYEDYAKNLMDLIVISDARHVAGDRDLAATLIATIRALEKDYFQV LWGMAKAATEMKLALGFLKRLWTEGSGEHKGEFNLKLLAWAPLVMNVRILAINQGVPATNTVKRIEHLAREGSFSPSFAN GLVEAYEVLTRHRILLQIKVIKGIQKSSYYLNPYTLPAEEREAIRQALLRIEDLQRTIHTNFSIM
Sequences:
>Translated_465_residues MLLWLSRAGVPRKCSTNCTSARTPALASPKRWTTNGLSTNQTLCYTLGEGQPSPFFYLRSARKMPQSVEQHIAAITDRIK DFVRFLDREEVAPVLAELREMFARELRATEGFASHERELHDRIRHESDYEQLRAIHDELNVLEMERFLAISSVSALHANC TEYRDILADRALALAEDEMEHDGRGRAPCPYALCSMGSDGREEQTLITDQDYLIVYGDGGGEAADEWFREFSELIVERLA QIGFKKCTGDIMPSNPTWRGSLSQWRRKLLAIVRYEYEDYAKNLMDLIVISDARHVAGDRDLAATLIATIRALEKDYFQV LWGMAKAATEMKLALGFLKRLWTEGSGEHKGEFNLKLLAWAPLVMNVRILAINQGVPATNTVKRIEHLAREGSFSPSFAN GLVEAYEVLTRHRILLQIKVIKGIQKSSYYLNPYTLPAEEREAIRQALLRIEDLQRTIHTNFSIM >Mature_465_residues MLLWLSRAGVPRKCSTNCTSARTPALASPKRWTTNGLSTNQTLCYTLGEGQPSPFFYLRSARKMPQSVEQHIAAITDRIK DFVRFLDREEVAPVLAELREMFARELRATEGFASHERELHDRIRHESDYEQLRAIHDELNVLEMERFLAISSVSALHANC TEYRDILADRALALAEDEMEHDGRGRAPCPYALCSMGSDGREEQTLITDQDYLIVYGDGGGEAADEWFREFSELIVERLA QIGFKKCTGDIMPSNPTWRGSLSQWRRKLLAIVRYEYEDYAKNLMDLIVISDARHVAGDRDLAATLIATIRALEKDYFQV LWGMAKAATEMKLALGFLKRLWTEGSGEHKGEFNLKLLAWAPLVMNVRILAINQGVPATNTVKRIEHLAREGSFSPSFAN GLVEAYEVLTRHRILLQIKVIKGIQKSSYYLNPYTLPAEEREAIRQALLRIEDLQRTIHTNFSIM
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52942; Mature: 52942
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLWLSRAGVPRKCSTNCTSARTPALASPKRWTTNGLSTNQTLCYTLGEGQPSPFFYLRS CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH ARKMPQSVEQHIAAITDRIKDFVRFLDREEVAPVLAELREMFARELRATEGFASHERELH HHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DRIRHESDYEQLRAIHDELNVLEMERFLAISSVSALHANCTEYRDILADRALALAEDEME HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDGRGRAPCPYALCSMGSDGREEQTLITDQDYLIVYGDGGGEAADEWFREFSELIVERLA CCCCCCCCCCHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH QIGFKKCTGDIMPSNPTWRGSLSQWRRKLLAIVRYEYEDYAKNLMDLIVISDARHVAGDR HCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH DLAATLIATIRALEKDYFQVLWGMAKAATEMKLALGFLKRLWTEGSGEHKGEFNLKLLAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE APLVMNVRILAINQGVPATNTVKRIEHLAREGSFSPSFANGLVEAYEVLTRHRILLQIKV CHHHHCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEHH IKGIQKSSYYLNPYTLPAEEREAIRQALLRIEDLQRTIHTNFSIM HHCCHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLLWLSRAGVPRKCSTNCTSARTPALASPKRWTTNGLSTNQTLCYTLGEGQPSPFFYLRS CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH ARKMPQSVEQHIAAITDRIKDFVRFLDREEVAPVLAELREMFARELRATEGFASHERELH HHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH DRIRHESDYEQLRAIHDELNVLEMERFLAISSVSALHANCTEYRDILADRALALAEDEME HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HDGRGRAPCPYALCSMGSDGREEQTLITDQDYLIVYGDGGGEAADEWFREFSELIVERLA CCCCCCCCCCHHHHCCCCCCCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH QIGFKKCTGDIMPSNPTWRGSLSQWRRKLLAIVRYEYEDYAKNLMDLIVISDARHVAGDR HCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCH DLAATLIATIRALEKDYFQVLWGMAKAATEMKLALGFLKRLWTEGSGEHKGEFNLKLLAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE APLVMNVRILAINQGVPATNTVKRIEHLAREGSFSPSFANGLVEAYEVLTRHRILLQIKV CHHHHCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEHH IKGIQKSSYYLNPYTLPAEEREAIRQALLRIEDLQRTIHTNFSIM HHCCHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA