| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is yeeE [H]
Identifier: 39996157
GI number: 39996157
Start: 1141604
End: 1142719
Strand: Reverse
Name: yeeE [H]
Synonym: GSU1055
Alternate gene names: 39996157
Gene position: 1142719-1141604 (Counterclockwise)
Preceding gene: 39996158
Following gene: 39996156
Centisome position: 29.96
GC content: 65.68
Gene sequence:
>1116_bases ATGACCGGGGATCCCGCATCCCTCGTGGCAGCCGGCCTGCTGCTGGGAATGGTCGCGGGATTCGTCATGCACCGTTCCGA CTTCTGCATGGCGGGTGCGTTTCGCGACCTGTTCCTCTTCGGCAGCGCCACTATGCTCAGGCCAGTGCTGCTGATGTCAG CGGCTGCCATGGTCCTGTTCGAGGTCGCACGCGTGTGCGGGTTGGTGCCGCTGTACCCCTTCCCCCTTTTCGGAGTACCC TCCGCGTCGAACCTCGCGGGGGGCGCCATCTTCGGCGTCGGCATGGTGCTGGCGGGAGGGTGTGTCGTGGGGACCCTCTA CCGGGTCGGGGCGGGAAACGTTGCCGCGATGGTTACACTGGCGGGGCTCGTGGCCGGGAGCGCACTCTACGCAGAGATCC ACCCCGTCTGGAAGCGCCTGGCCGACGCTACCGCCATGCCGGCGATGGGGGTTACGGTCCCGGCGTTTCTGGGGATTGAA CCCTATTGGCTCACAACGCCGCTGGCCATCGTAGCCGCCCTGATTGTCTTCCACTGGCAACGCCGGGGCATGCTGACCCG CCAGGCACAGGTGGAAGGCTACCTCCAGCCGTGGTGGACGGCGCTGGCGCTGGCAGGGGTCAGCCTCCTGTCCGTGATGG CCACTACCATGCCGCTGGGGGTGACAACGTCCTACACAAAGGCGGGAGGATGGCTTCTCGACCGAGTCATTCCCGGGCAT ATTGCCGAACGTAACTACTTTCTGGCGCTTCCGCTCAACCTTGCGGCAACGACACCCCTTGGTGAAGTGCCCCTTATCGG CGGACCCGCGCCGGTAACGGACGCAATCGCGCTTGTCCAGGTACCGGTCATCGCCGGAATCATCGCGGGCAGCGCGCTTT CCGCGCTCCTGCTGGGAGAGCTCGGCTTCCGCTACCGCATCCCGGCCCGGCAGTACCTGGCCGCCCTGACCGGTGGGATA CTCATGGGCCTTGCCGCACGAATGGCTCCCTCCTGCAACATCTGGCACCTGGCCGGAGGGTTGCCGATCCTGGCGTGGCA AAGCATCATCTTTACAGCAGGGCTCCTGGCCGGAGCCTGGCTGGGGAGCAGGATCATCATCCGGCTTCTTGCATGA
Upstream 100 bases:
>100_bases CAGGGGGTCCGTCACTCAAGTTTCCTGCCGAATTGCCGATAAAGATACTAATGAAAGCATGCCTACCCGATAGTGCCCGG ATCAAGGCACAGTCCCGAGC
Downstream 100 bases:
>100_bases CCGGGCCCGGACGGGCTTGGGGACCATCTCGCGACAGAGGTTGATGTCATGGAAACCATTGAATTCGACATCCGCGGCCA GATCTGCCCCTCCACGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTGDPASLVAAGLLLGMVAGFVMHRSDFCMAGAFRDLFLFGSATMLRPVLLMSAAAMVLFEVARVCGLVPLYPFPLFGVP SASNLAGGAIFGVGMVLAGGCVVGTLYRVGAGNVAAMVTLAGLVAGSALYAEIHPVWKRLADATAMPAMGVTVPAFLGIE PYWLTTPLAIVAALIVFHWQRRGMLTRQAQVEGYLQPWWTALALAGVSLLSVMATTMPLGVTTSYTKAGGWLLDRVIPGH IAERNYFLALPLNLAATTPLGEVPLIGGPAPVTDAIALVQVPVIAGIIAGSALSALLLGELGFRYRIPARQYLAALTGGI LMGLAARMAPSCNIWHLAGGLPILAWQSIIFTAGLLAGAWLGSRIIIRLLA
Sequences:
>Translated_371_residues MTGDPASLVAAGLLLGMVAGFVMHRSDFCMAGAFRDLFLFGSATMLRPVLLMSAAAMVLFEVARVCGLVPLYPFPLFGVP SASNLAGGAIFGVGMVLAGGCVVGTLYRVGAGNVAAMVTLAGLVAGSALYAEIHPVWKRLADATAMPAMGVTVPAFLGIE PYWLTTPLAIVAALIVFHWQRRGMLTRQAQVEGYLQPWWTALALAGVSLLSVMATTMPLGVTTSYTKAGGWLLDRVIPGH IAERNYFLALPLNLAATTPLGEVPLIGGPAPVTDAIALVQVPVIAGIIAGSALSALLLGELGFRYRIPARQYLAALTGGI LMGLAARMAPSCNIWHLAGGLPILAWQSIIFTAGLLAGAWLGSRIIIRLLA >Mature_370_residues TGDPASLVAAGLLLGMVAGFVMHRSDFCMAGAFRDLFLFGSATMLRPVLLMSAAAMVLFEVARVCGLVPLYPFPLFGVPS ASNLAGGAIFGVGMVLAGGCVVGTLYRVGAGNVAAMVTLAGLVAGSALYAEIHPVWKRLADATAMPAMGVTVPAFLGIEP YWLTTPLAIVAALIVFHWQRRGMLTRQAQVEGYLQPWWTALALAGVSLLSVMATTMPLGVTTSYTKAGGWLLDRVIPGHI AERNYFLALPLNLAATTPLGEVPLIGGPAPVTDAIALVQVPVIAGIIAGSALSALLLGELGFRYRIPARQYLAALTGGIL MGLAARMAPSCNIWHLAGGLPILAWQSIIFTAGLLAGAWLGSRIIIRLLA
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=129, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 38602; Mature: 38471
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGDPASLVAAGLLLGMVAGFVMHRSDFCMAGAFRDLFLFGSATMLRPVLLMSAAAMVLF CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EVARVCGLVPLYPFPLFGVPSASNLAGGAIFGVGMVLAGGCVVGTLYRVGAGNVAAMVTL HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AGLVAGSALYAEIHPVWKRLADATAMPAMGVTVPAFLGIEPYWLTTPLAIVAALIVFHWQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH RRGMLTRQAQVEGYLQPWWTALALAGVSLLSVMATTMPLGVTTSYTKAGGWLLDRVIPGH HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC IAERNYFLALPLNLAATTPLGEVPLIGGPAPVTDAIALVQVPVIAGIIAGSALSALLLGE CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFRYRIPARQYLAALTGGILMGLAARMAPSCNIWHLAGGLPILAWQSIIFTAGLLAGAW CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH LGSRIIIRLLA HHHHHHHHHCC >Mature Secondary Structure TGDPASLVAAGLLLGMVAGFVMHRSDFCMAGAFRDLFLFGSATMLRPVLLMSAAAMVLF CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EVARVCGLVPLYPFPLFGVPSASNLAGGAIFGVGMVLAGGCVVGTLYRVGAGNVAAMVTL HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH AGLVAGSALYAEIHPVWKRLADATAMPAMGVTVPAFLGIEPYWLTTPLAIVAALIVFHWQ HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHH RRGMLTRQAQVEGYLQPWWTALALAGVSLLSVMATTMPLGVTTSYTKAGGWLLDRVIPGH HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCC IAERNYFLALPLNLAATTPLGEVPLIGGPAPVTDAIALVQVPVIAGIIAGSALSALLLGE CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGFRYRIPARQYLAALTGGILMGLAARMAPSCNIWHLAGGLPILAWQSIIFTAGLLAGAW CCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH LGSRIIIRLLA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]