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The map label for this gene is ychJ [C]

Identifier: 39996150

GI number: 39996150

Start: 1135698

End: 1136183

Strand: Direct

Name: ychJ [C]

Synonym: GSU1048

Alternate gene names: 39996150

Gene position: 1135698-1136183 (Clockwise)

Preceding gene: 39996149

Following gene: 39996152

Centisome position: 29.78

GC content: 62.55

Gene sequence:

>486_bases
ATGACCAACCTTTGTCCCTGCGGTACCGGCAAAAGCTTCGGCGAGTGCTGTGAGCCCCTCGTCACAGGCGCGCGCGCAGC
TCTCACCGCCGAAGAGCTGATGCGTTCGCGCTACACCGCTTATACCCGTGCGGAGATAGGCTATATCCACGACACCACAC
ATCCGGACCACCGGGCCGATTTCGACGAGAAGGGAACCCGCGAGTGGGCCGAATCATCCCAGTGGGAGGGGCTCGAAATC
CTTGCCACTGCCGGCGGAGGACCCGCCGACACCGAGGGACGGGTTGAGTTCATCGCCCGTTACCGCGACACCGGAGGGCG
CCGCACCCACCATGAACTGGCCGAGTTCCGCAAGGTCGATGATGCCTGGTATTTTACCGACGGCTATGGGATCAAGCCCC
AGCCCGCCGTGAGCACTAAGATCGGGCGCAATGATCCGTGCACCTGCGGTAGCGGCAAGAAGTACAAAAAGTGTTGCGGC
GCCTGA

Upstream 100 bases:

>100_bases
ACAGTTGACACGGACAGCGCGGGCAGGTATGTAATGGCTTTCAGAAGGCCCCCCGAGCCCATGGCAACGGGGCCGATTTA
CACGCTACAAGGAGCCACCC

Downstream 100 bases:

>100_bases
CCTTGTTCGCCGTCTGACCGTGACCGCGGCGCCCTTTCGGCGCCGCGGTTCGTTTTTCCGCTCCGCCGTCACCCCCTGAA
GGCCCGCTCCACTTCATCCC

Product: SecC motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTNLCPCGTGKSFGECCEPLVTGARAALTAEELMRSRYTAYTRAEIGYIHDTTHPDHRADFDEKGTREWAESSQWEGLEI
LATAGGGPADTEGRVEFIARYRDTGGRRTHHELAEFRKVDDAWYFTDGYGIKPQPAVSTKIGRNDPCTCGSGKKYKKCCG
A

Sequences:

>Translated_161_residues
MTNLCPCGTGKSFGECCEPLVTGARAALTAEELMRSRYTAYTRAEIGYIHDTTHPDHRADFDEKGTREWAESSQWEGLEI
LATAGGGPADTEGRVEFIARYRDTGGRRTHHELAEFRKVDDAWYFTDGYGIKPQPAVSTKIGRNDPCTCGSGKKYKKCCG
A
>Mature_160_residues
TNLCPCGTGKSFGECCEPLVTGARAALTAEELMRSRYTAYTRAEIGYIHDTTHPDHRADFDEKGTREWAESSQWEGLEIL
ATAGGGPADTEGRVEFIARYRDTGGRRTHHELAEFRKVDDAWYFTDGYGIKPQPAVSTKIGRNDPCTCGSGKKYKKCCGA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=160, Percent_Identity=38.75, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1048_GEOSL (Q74EB5)

Other databases:

- EMBL:   AE017180
- RefSeq:   NP_952101.1
- HSSP:   P10408
- ProteinModelPortal:   Q74EB5
- SMR:   Q74EB5
- GeneID:   2688709
- GenomeReviews:   AE017180_GR
- KEGG:   gsu:GSU1048
- NMPDR:   fig|243231.1.peg.1039
- TIGR:   GSU1048
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- ProtClustDB:   CLSK828150
- BioCyc:   GSUL243231:GSU_1048-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 17764; Mature: 17633

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLCPCGTGKSFGECCEPLVTGARAALTAEELMRSRYTAYTRAEIGYIHDTTHPDHRAD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC
FDEKGTREWAESSQWEGLEILATAGGGPADTEGRVEFIARYRDTGGRRTHHELAEFRKVD
CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
DAWYFTDGYGIKPQPAVSTKIGRNDPCTCGSGKKYKKCCGA
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
>Mature Secondary Structure 
TNLCPCGTGKSFGECCEPLVTGARAALTAEELMRSRYTAYTRAEIGYIHDTTHPDHRAD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCC
FDEKGTREWAESSQWEGLEILATAGGGPADTEGRVEFIARYRDTGGRRTHHELAEFRKVD
CCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHC
DAWYFTDGYGIKPQPAVSTKIGRNDPCTCGSGKKYKKCCGA
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA