| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is zraS [H]
Identifier: 39996140
GI number: 39996140
Start: 1124101
End: 1125642
Strand: Direct
Name: zraS [H]
Synonym: GSU1038
Alternate gene names: 39996140
Gene position: 1124101-1125642 (Clockwise)
Preceding gene: 39996139
Following gene: 39996141
Centisome position: 29.47
GC content: 62.71
Gene sequence:
>1542_bases ATGACCACTCACGTGCGGATGAAACATGTTATGGATGAATGTGCTCTGGAAAATGCACCTCCTCTGATCCTCCTGGTGGA CGATGATGCGGTGACCCGCAAGATGCTGCGCAACCTCTTCACGCTTTCGGGATACCGCGTGGCCGACGCGGAAGACGGCG CCCGGGCGGTTGAGATGTTTCGCGAACTTTCACCGGATCTGGTCCTTCTCGATATCATGATGCCGGTCATGGACGGGTAT GGCGCCTGTGCGGCGATCCGCGGCCTGCCGGGCGGCGAGCATGTCCCGATCATCATCATGACTGCCCTGGACGATGCTAA CTCAATCGGCCGTGCCTTTGACGCCGGGGCCACCGATTTCATCGAGAAGCCCGTGAACTGGATGCTTCTCAACCACCGCC TTCCCTATCTGCTGCGGGCGCGGGACGCCTTTGTCTCCCTCCAGCGCAGCGAGGCTACCAGCCGCCTGCTTTCGGGCGAG CTGATGGCGCTCCTGAACTCAATCAACGACAGCCTTGTCCTGTTCTCCACCGATCTGAAACTGCTCTGGGCCAACCGGAG CGCCGAGCATCTCTACGGCGATTACGTCGAGCAGCTCGTTGGTCAGGAGTTCACTTCCCTCAAGGGGGCGCGGGGCATCC CGTCCGATGCCATTGCCGTACGCGCGTCGCTCGGCTCGGGCGAGCCCTGCTACGAGCGCGTATCAGCCGCCGACGGCAGG ATCTGGGACATGAAGTATTTCCCCGTGCGCGGCGAAGACGGCACCGTGCGCGGCATCATCGAGCTCGCCTCGGACATGAC GGAGGTGGTCTCACTCCAGGCGGAGGCCCTCCGGTCGGGACAACTGGCAGCCCTGGGCGAACTGGCAGCCGGCGTGGCCC ACGAGATCAACAACCCCATCAACGGCATCATCAACTATGCGCAACTGCTGGTGAACTGGCTGCCGTCCGCCTGCAAGGAG CGCGACATCGCCGAACGGATCATCCGGGAGGGAGATCGGGTGGCGGGGATCGTCCGGGGGCTTCTCTTCTTTGCCCGGGA GGGCATGGGGGCGCGCCTGCCCTGCAATGTCGCCGACGTCCTGACCGACACGCTCACCCTCACCGAGGCCCAGATCCGCA AGGACGGCATTACTCTCAAGGTCGGGGTGCCGGCTGACCTGGGTCGCGTGAGAGCCAGCCACCAGCAGCTCCAGCAGGTC TTCCTCAATATTATCAGCAACGCCCGCTATGCGCTCAACGAGAAGTTCCGCGGTTTCCATTCCGCCAAGATCCTGGAGAT CCGGGGCGAGCGCGTGCTCATCGATGACCGGCCGTACATCCGGATCGGCTTCAACGATACCGGTACCGGTATCCCGGAAG CCATCAAGGACAAGGTGATGACGCCGTTTTTTTCGACCAAGCCTACCTGCAAGGGGACAGGCCTGGGGCTCAGCATCAGC CAGAACATCATCCGCGACCATGACGGCAACCTCTCCATCGAGAGCCGCGAGGGGGAATTCACCCTCGTGAGCATCGACCT TCCCGCCGAGGAGACGCCATGA
Upstream 100 bases:
>100_bases TTGCGTCGAATCTCCCGATTTGACAAAAAAATGTTTCCGAGCCGTTGGGAGGTTGAAAAAAATCTAAATTCACCGATACT TATGACCGATACGGTAAAGT
Downstream 100 bases:
>100_bases CATACAGCATTCTCGTGGTAGACGACGAGGAAAGCCTTCGCTACACCTTCCGCTGCTTCCTGGAGCATCAGGGCTATGAG GTAGCGATTGCGGCGAACTA
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTTHVRMKHVMDECALENAPPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMFRELSPDLVLLDIMMPVMDGY GACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPVNWMLLNHRLPYLLRARDAFVSLQRSEATSRLLSGE LMALLNSINDSLVLFSTDLKLLWANRSAEHLYGDYVEQLVGQEFTSLKGARGIPSDAIAVRASLGSGEPCYERVSAADGR IWDMKYFPVRGEDGTVRGIIELASDMTEVVSLQAEALRSGQLAALGELAAGVAHEINNPINGIINYAQLLVNWLPSACKE RDIAERIIREGDRVAGIVRGLLFFAREGMGARLPCNVADVLTDTLTLTEAQIRKDGITLKVGVPADLGRVRASHQQLQQV FLNIISNARYALNEKFRGFHSAKILEIRGERVLIDDRPYIRIGFNDTGTGIPEAIKDKVMTPFFSTKPTCKGTGLGLSIS QNIIRDHDGNLSIESREGEFTLVSIDLPAEETP
Sequences:
>Translated_513_residues MTTHVRMKHVMDECALENAPPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMFRELSPDLVLLDIMMPVMDGY GACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPVNWMLLNHRLPYLLRARDAFVSLQRSEATSRLLSGE LMALLNSINDSLVLFSTDLKLLWANRSAEHLYGDYVEQLVGQEFTSLKGARGIPSDAIAVRASLGSGEPCYERVSAADGR IWDMKYFPVRGEDGTVRGIIELASDMTEVVSLQAEALRSGQLAALGELAAGVAHEINNPINGIINYAQLLVNWLPSACKE RDIAERIIREGDRVAGIVRGLLFFAREGMGARLPCNVADVLTDTLTLTEAQIRKDGITLKVGVPADLGRVRASHQQLQQV FLNIISNARYALNEKFRGFHSAKILEIRGERVLIDDRPYIRIGFNDTGTGIPEAIKDKVMTPFFSTKPTCKGTGLGLSIS QNIIRDHDGNLSIESREGEFTLVSIDLPAEETP >Mature_512_residues TTHVRMKHVMDECALENAPPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMFRELSPDLVLLDIMMPVMDGYG ACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDFIEKPVNWMLLNHRLPYLLRARDAFVSLQRSEATSRLLSGEL MALLNSINDSLVLFSTDLKLLWANRSAEHLYGDYVEQLVGQEFTSLKGARGIPSDAIAVRASLGSGEPCYERVSAADGRI WDMKYFPVRGEDGTVRGIIELASDMTEVVSLQAEALRSGQLAALGELAAGVAHEINNPINGIINYAQLLVNWLPSACKER DIAERIIREGDRVAGIVRGLLFFAREGMGARLPCNVADVLTDTLTLTEAQIRKDGITLKVGVPADLGRVRASHQQLQQVF LNIISNARYALNEKFRGFHSAKILEIRGERVLIDDRPYIRIGFNDTGTGIPEAIKDKVMTPFFSTKPTCKGTGLGLSISQ NIIRDHDGNLSIESREGEFTLVSIDLPAEETP
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790300, Length=349, Percent_Identity=30.0859598853868, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=30.2904564315353, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1788549, Length=263, Percent_Identity=30.4182509505703, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=37.6146788990826, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI48994928, Length=371, Percent_Identity=22.911051212938, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789149, Length=220, Percent_Identity=24.5454545454545, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1790437, Length=105, Percent_Identity=38.0952380952381, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=33.9805825242718, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI87082012, Length=174, Percent_Identity=28.1609195402299, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI87081816, Length=242, Percent_Identity=27.6859504132231, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI145693157, Length=133, Percent_Identity=32.3308270676692, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56272; Mature: 56141
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHVRMKHVMDECALENAPPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMF CCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH RELSPDLVLLDIMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDF HHCCCCEEHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHH IEKPVNWMLLNHRLPYLLRARDAFVSLQRSEATSRLLSGELMALLNSINDSLVLFSTDLK HHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEE LLWANRSAEHLYGDYVEQLVGQEFTSLKGARGIPSDAIAVRASLGSGEPCYERVSAADGR EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCE IWDMKYFPVRGEDGTVRGIIELASDMTEVVSLQAEALRSGQLAALGELAAGVAHEINNPI EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH NGIINYAQLLVNWLPSACKERDIAERIIREGDRVAGIVRGLLFFAREGMGARLPCNVADV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LTDTLTLTEAQIRKDGITLKVGVPADLGRVRASHQQLQQVFLNIISNARYALNEKFRGFH HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC SAKILEIRGERVLIDDRPYIRIGFNDTGTGIPEAIKDKVMTPFFSTKPTCKGTGLGLSIS CEEEEEECCCEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH QNIIRDHDGNLSIESREGEFTLVSIDLPAEETP HHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure TTHVRMKHVMDECALENAPPLILLVDDDAVTRKMLRNLFTLSGYRVADAEDGARAVEMF CCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHH RELSPDLVLLDIMMPVMDGYGACAAIRGLPGGEHVPIIIMTALDDANSIGRAFDAGATDF HHCCCCEEHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHH IEKPVNWMLLNHRLPYLLRARDAFVSLQRSEATSRLLSGELMALLNSINDSLVLFSTDLK HHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEE LLWANRSAEHLYGDYVEQLVGQEFTSLKGARGIPSDAIAVRASLGSGEPCYERVSAADGR EEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCE IWDMKYFPVRGEDGTVRGIIELASDMTEVVSLQAEALRSGQLAALGELAAGVAHEINNPI EEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHH NGIINYAQLLVNWLPSACKERDIAERIIREGDRVAGIVRGLLFFAREGMGARLPCNVADV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LTDTLTLTEAQIRKDGITLKVGVPADLGRVRASHQQLQQVFLNIISNARYALNEKFRGFH HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC SAKILEIRGERVLIDDRPYIRIGFNDTGTGIPEAIKDKVMTPFFSTKPTCKGTGLGLSIS CEEEEEECCCEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHH QNIIRDHDGNLSIESREGEFTLVSIDLPAEETP HHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]