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The map label for this gene is motB [H]

Identifier: 39996116

GI number: 39996116

Start: 1094975

End: 1095844

Strand: Direct

Name: motB [H]

Synonym: GSU1013

Alternate gene names: 39996116

Gene position: 1094975-1095844 (Clockwise)

Preceding gene: 39996115

Following gene: 39996117

Centisome position: 28.71

GC content: 57.01

Gene sequence:

>870_bases
ATGCTGAAACGATTGGTGATCCTGGCGGTACTGTCTCTCTCGTCCTTAATGCTGTCCGGGTGCCTTGTCGGCGAAGGAAA
GTATCTGAAAAAAGTAGAGGAAGCCGATAACCTGTCGAAGGAACTGACGACGCTTCAGGAGAAATATTCAGCCCTGTCCT
CGGAGAACGAAGGGCTCAAGGGGGCGCTTGCCAAGCTCAAGGACGAGGCCGCCGGTCTTGCCCAGGACAAGGAGAAGCTC
ACCGCTGACAACCGGGAGCTCCAGCAGGTGCTCCAGGCGAAATCTGACTCACTTTCCCAGAATATTGTGGAGTTGCGCCA
GAAGGTGAGCCAGCTGGAAGCCGAAAATGCCCGCCTCAAGGCCGACATCGCCTCGACCCAGAAAGCCAAGGAGGAGCAGG
TCCGGGAAGTGAGCAAGACCTACGAGGATCTGCTCGACAAGATGAAGGGCGAGATTGCCCAGGGACAGGTGACCATCTCC
GAGCTCAAAGGAAAGCTGACAGTGAACATGGTGGATGCAATTCTCTTTGACTCGGGCAAAGCCGAGGTGAAACCGGCGGG
TATGGACCTTCTCCAGAAGGTGGTCGAGATCCTGAAGGATGTAAAGGACAAGGCCATCAGGATCGAAGGACATACGGACA
ACGTTCAGATCGTCGGCAACCTTGCCAAGCGCTTCCCCACCAACTGGGAGCTTTCCTCAGCCCGCGCCATCAACGTGACC
CGTTTCCTCCAGAGCCGTGGAATTGATCCCGCCGTGCTGTCTGCCGTGGCCTACGGAGAGTATCACCCCGTCGCTCCCAA
CGATACCGATGAAGGCAAGGCCAAAAACCGGCGCATCGAGATCATCCTGGTGCCGAAGGATGCCCCCTGA

Upstream 100 bases:

>100_bases
GTATATTTTTCAATGATTCCAGACATGATGCAGCTCGCGTCCGTGGCGCCGTTCCTCGACGGGGCCGTGCCGGTTGCTGC
AGAGCGAAAAGGAGGGTTTC

Downstream 100 bases:

>100_bases
CGCGCGATGTCCATGAAGAAGAAAAGCACACAATCCGGACAGAAAACGAAAAAGTTCTCCCCCAGCCCCTTCAGCGGCCT
CAAAGGATTTCGTCCCGAGC

Product: chemotaxis protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MLKRLVILAVLSLSSLMLSGCLVGEGKYLKKVEEADNLSKELTTLQEKYSALSSENEGLKGALAKLKDEAAGLAQDKEKL
TADNRELQQVLQAKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEQVREVSKTYEDLLDKMKGEIAQGQVTIS
ELKGKLTVNMVDAILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIEGHTDNVQIVGNLAKRFPTNWELSSARAINVT
RFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKDAP

Sequences:

>Translated_289_residues
MLKRLVILAVLSLSSLMLSGCLVGEGKYLKKVEEADNLSKELTTLQEKYSALSSENEGLKGALAKLKDEAAGLAQDKEKL
TADNRELQQVLQAKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEQVREVSKTYEDLLDKMKGEIAQGQVTIS
ELKGKLTVNMVDAILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIEGHTDNVQIVGNLAKRFPTNWELSSARAINVT
RFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKDAP
>Mature_289_residues
MLKRLVILAVLSLSSLMLSGCLVGEGKYLKKVEEADNLSKELTTLQEKYSALSSENEGLKGALAKLKDEAAGLAQDKEKL
TADNRELQQVLQAKSDSLSQNIVELRQKVSQLEAENARLKADIASTQKAKEEQVREVSKTYEDLLDKMKGEIAQGQVTIS
ELKGKLTVNMVDAILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIEGHTDNVQIVGNLAKRFPTNWELSSARAINVT
RFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKDAP

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=142, Percent_Identity=34.5070422535211, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 31735; Mature: 31735

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLVILAVLSLSSLMLSGCLVGEGKYLKKVEEADNLSKELTTLQEKYSALSSENEGLK
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GALAKLKDEAAGLAQDKEKLTADNRELQQVLQAKSDSLSQNIVELRQKVSQLEAENARLK
HHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ADIASTQKAKEEQVREVSKTYEDLLDKMKGEIAQGQVTISELKGKLTVNMVDAILFDSGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHCCHHHHHHHHHHHHCCCC
AEVKPAGMDLLQKVVEILKDVKDKAIRIEGHTDNVQIVGNLAKRFPTNWELSSARAINVT
CCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
RFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKDAP
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MLKRLVILAVLSLSSLMLSGCLVGEGKYLKKVEEADNLSKELTTLQEKYSALSSENEGLK
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GALAKLKDEAAGLAQDKEKLTADNRELQQVLQAKSDSLSQNIVELRQKVSQLEAENARLK
HHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ADIASTQKAKEEQVREVSKTYEDLLDKMKGEIAQGQVTISELKGKLTVNMVDAILFDSGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEEHHHHCCHHHHHHHHHHHHCCCC
AEVKPAGMDLLQKVVEILKDVKDKAIRIEGHTDNVQIVGNLAKRFPTNWELSSARAINVT
CCCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
RFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEGKAKNRRIEIILVPKDAP
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]