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The map label for this gene is 39996117

Identifier: 39996117

GI number: 39996117

Start: 1095857

End: 1096576

Strand: Direct

Name: 39996117

Synonym: GSU1014

Alternate gene names: NA

Gene position: 1095857-1096576 (Clockwise)

Preceding gene: 39996116

Following gene: 39996118

Centisome position: 28.73

GC content: 63.61

Gene sequence:

>720_bases
ATGAAGAAGAAAAGCACACAATCCGGACAGAAAACGAAAAAGTTCTCCCCCAGCCCCTTCAGCGGCCTCAAAGGATTTCG
TCCCGAGCCGGCCGAGCCGGAGAAAAAACAGCCGGCGGTTGCCGCTCCTCCGCCCCGGAGCACGGCGGAACCCGACGATC
TGAATCTTTTTCTGAGGGAAATGGCCGGTGTAAACCGCATGGATCGGTCGGGCAAGGGGCCGTCGGAACAACGCCCGCCG
AAAGAACCGGCCGGGCAGGCTCGGACAGCTGACGATGATCTGGTCAAGGGGCTGGAAGCTGCCGACCAGGCAGCCTTTGC
CGAAGCCATCGCGCGGTTGAAGCTTGACGTGAGTTTTCGCGAGAGTCTGCCGGGCGACAGCGGCGCTCCCCGTCCGGTGA
GCCGGTTGCGCCAGCTCAAGAGCGGCCAGATACGAATCGATCTGGAGCTGGACCTCCACGGGCTCACCCGGGAAGAGGCC
GTGGCGAGCCTTGAGCGGTTCATCACCGGTGCCCATCGAAGGGGGCAGAAGGCTGTTCTCGTCATTACGGGAAAAGGGAA
CAACTCTTCCGGTGAGCCGGTGCTCCAAGGGGCGGTCCTGTCCTGGCTCCGGGAGCGGGGCAAGAGCATGGTGGCCGAAT
TCGCTCCGGCCCCCCGGGACATGGGGGGCAGCGGCGCAGTGGTCGTGTTCCTCAGGACGACGAGAGTAAAGGCTGGCTAG

Upstream 100 bases:

>100_bases
TCACCCCGTCGCTCCCAACGATACCGATGAAGGCAAGGCCAAAAACCGGCGCATCGAGATCATCCTGGTGCCGAAGGATG
CCCCCTGACGCGCGATGTCC

Downstream 100 bases:

>100_bases
CGGTAATCCCTGATCGGCCAGGAGGCAGCCGTGTTCGGACTGTTCAAACGTAAAAAGGCGGACCCAGCCATCTTCGACAG
CGCCGAAGCCGCTTTCGACT

Product: smr domain protein

Products: NA

Alternate protein names: Smr Protein/MutS2-Like; Smr Domain Protein; DNA Repair Protein; Smr/Muts Family Protein

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKKSTQSGQKTKKFSPSPFSGLKGFRPEPAEPEKKQPAVAAPPPRSTAEPDDLNLFLREMAGVNRMDRSGKGPSEQRPP
KEPAGQARTADDDLVKGLEAADQAAFAEAIARLKLDVSFRESLPGDSGAPRPVSRLRQLKSGQIRIDLELDLHGLTREEA
VASLERFITGAHRRGQKAVLVITGKGNNSSGEPVLQGAVLSWLRERGKSMVAEFAPAPRDMGGSGAVVVFLRTTRVKAG

Sequences:

>Translated_239_residues
MKKKSTQSGQKTKKFSPSPFSGLKGFRPEPAEPEKKQPAVAAPPPRSTAEPDDLNLFLREMAGVNRMDRSGKGPSEQRPP
KEPAGQARTADDDLVKGLEAADQAAFAEAIARLKLDVSFRESLPGDSGAPRPVSRLRQLKSGQIRIDLELDLHGLTREEA
VASLERFITGAHRRGQKAVLVITGKGNNSSGEPVLQGAVLSWLRERGKSMVAEFAPAPRDMGGSGAVVVFLRTTRVKAG
>Mature_239_residues
MKKKSTQSGQKTKKFSPSPFSGLKGFRPEPAEPEKKQPAVAAPPPRSTAEPDDLNLFLREMAGVNRMDRSGKGPSEQRPP
KEPAGQARTADDDLVKGLEAADQAAFAEAIARLKLDVSFRESLPGDSGAPRPVSRLRQLKSGQIRIDLELDLHGLTREEA
VASLERFITGAHRRGQKAVLVITGKGNNSSGEPVLQGAVLSWLRERGKSMVAEFAPAPRDMGGSGAVVVFLRTTRVKAG

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25684; Mature: 25684

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSTQSGQKTKKFSPSPFSGLKGFRPEPAEPEKKQPAVAAPPPRSTAEPDDLNLFLRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
MAGVNRMDRSGKGPSEQRPPKEPAGQARTADDDLVKGLEAADQAAFAEAIARLKLDVSFR
HHCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ESLPGDSGAPRPVSRLRQLKSGQIRIDLELDLHGLTREEAVASLERFITGAHRRGQKAVL
HCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
VITGKGNNSSGEPVLQGAVLSWLRERGKSMVAEFAPAPRDMGGSGAVVVFLRTTRVKAG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
MKKKSTQSGQKTKKFSPSPFSGLKGFRPEPAEPEKKQPAVAAPPPRSTAEPDDLNLFLRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
MAGVNRMDRSGKGPSEQRPPKEPAGQARTADDDLVKGLEAADQAAFAEAIARLKLDVSFR
HHCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ESLPGDSGAPRPVSRLRQLKSGQIRIDLELDLHGLTREEAVASLERFITGAHRRGQKAVL
HCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
VITGKGNNSSGEPVLQGAVLSWLRERGKSMVAEFAPAPRDMGGSGAVVVFLRTTRVKAG
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA