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The map label for this gene is 39996114

Identifier: 39996114

GI number: 39996114

Start: 1092852

End: 1093580

Strand: Direct

Name: 39996114

Synonym: GSU1011

Alternate gene names: NA

Gene position: 1092852-1093580 (Clockwise)

Preceding gene: 39996113

Following gene: 39996115

Centisome position: 28.65

GC content: 58.57

Gene sequence:

>729_bases
ATGTACAACTTCCTGATTTCCGGCGCGATCGCCCTTGTCGCCATTGTCGTCATCATCCTCGCCGCCGGCACCTCGTCCTG
GTGGTGGGCCATTCTTGTTGGGCTGACGCTGTTCGGCGGCTCTTTCCTCCTCATCTCCCGCGTGGTCATGAAAAAGGTTC
TTGCCCTCATGGAGAGCGCATCCCGGGATATCCAGGCCCAGCGGGTGGAAAAGGCGATCCGCGACCTGAAAGAGGGACTC
CGCTACTCTCGCTGGCAGATTTACGTGGAGGGGCAGATCAACGCCCAGATCGGCATCATCTACTACCTGAAACGGGATTT
CTCCGGCGCGTTTCCCTATCTTGAGAAGGCCTTCAACAAGAACTGGGTTGCCATGGCCATGCTCGCCATCACCTACATGA
AGCGGAACAAGCGGGACAAGATGAAGGAGACCTTCGAGAAGGCGGTCCAGTGGAGCCCCAAGGAGTCGCTGCTCTGGAGC
GTGTATGCCTACTGCTGGACCGAGTGCGAGGATATTGGGCAGGCTCGTGAGGTCCTGGAGCGTGGACTCAAGAAGATCCC
GGGCGACGACAAGCTAACCGCCAACCTTGAGGCACTCAAGGAAGGGAAGAAGATGAAGATGAAGAACTACGGCGAGATGT
GGCTCCAGTTTCACCTGGAGCGCCAGAGCGTCGTCATGAAGCAGCAGGCGGCCGCCATGGGGATGAAGCGGCGGTTCGTC
CGGAAGTAG

Upstream 100 bases:

>100_bases
TGTGGAGAAAAAAGGGTCGATGGTGCCGGTCGACGGCGGGGAGAACAGCTAGCACGCTCTATTCTTCACTGCACTCACGA
ATGAAAGGACTTCATCCGCA

Downstream 100 bases:

>100_bases
ACGTCGCCGTCTAACGCAAGGCAGCACGAAAAGGGACGGTTCCGTCCCTTTTTTTGTTCGCGGGCAGGTAACCCAACCCT
CTCTCCGGGCCAGACATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tpr Domain Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MYNFLISGAIALVAIVVIILAAGTSSWWWAILVGLTLFGGSFLLISRVVMKKVLALMESASRDIQAQRVEKAIRDLKEGL
RYSRWQIYVEGQINAQIGIIYYLKRDFSGAFPYLEKAFNKNWVAMAMLAITYMKRNKRDKMKETFEKAVQWSPKESLLWS
VYAYCWTECEDIGQAREVLERGLKKIPGDDKLTANLEALKEGKKMKMKNYGEMWLQFHLERQSVVMKQQAAAMGMKRRFV
RK

Sequences:

>Translated_242_residues
MYNFLISGAIALVAIVVIILAAGTSSWWWAILVGLTLFGGSFLLISRVVMKKVLALMESASRDIQAQRVEKAIRDLKEGL
RYSRWQIYVEGQINAQIGIIYYLKRDFSGAFPYLEKAFNKNWVAMAMLAITYMKRNKRDKMKETFEKAVQWSPKESLLWS
VYAYCWTECEDIGQAREVLERGLKKIPGDDKLTANLEALKEGKKMKMKNYGEMWLQFHLERQSVVMKQQAAAMGMKRRFV
RK
>Mature_242_residues
MYNFLISGAIALVAIVVIILAAGTSSWWWAILVGLTLFGGSFLLISRVVMKKVLALMESASRDIQAQRVEKAIRDLKEGL
RYSRWQIYVEGQINAQIGIIYYLKRDFSGAFPYLEKAFNKNWVAMAMLAITYMKRNKRDKMKETFEKAVQWSPKESLLWS
VYAYCWTECEDIGQAREVLERGLKKIPGDDKLTANLEALKEGKKMKMKNYGEMWLQFHLERQSVVMKQQAAAMGMKRRFV
RK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28016; Mature: 28016

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNFLISGAIALVAIVVIILAAGTSSWWWAILVGLTLFGGSFLLISRVVMKKVLALMESA
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRDIQAQRVEKAIRDLKEGLRYSRWQIYVEGQINAQIGIIYYLKRDFSGAFPYLEKAFNK
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHCC
NWVAMAMLAITYMKRNKRDKMKETFEKAVQWSPKESLLWSVYAYCWTECEDIGQAREVLE
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLKKIPGDDKLTANLEALKEGKKMKMKNYGEMWLQFHLERQSVVMKQQAAAMGMKRRFV
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RK
CC
>Mature Secondary Structure
MYNFLISGAIALVAIVVIILAAGTSSWWWAILVGLTLFGGSFLLISRVVMKKVLALMESA
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
SRDIQAQRVEKAIRDLKEGLRYSRWQIYVEGQINAQIGIIYYLKRDFSGAFPYLEKAFNK
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCHHHHHHHCC
NWVAMAMLAITYMKRNKRDKMKETFEKAVQWSPKESLLWSVYAYCWTECEDIGQAREVLE
CHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGLKKIPGDDKLTANLEALKEGKKMKMKNYGEMWLQFHLERQSVVMKQQAAAMGMKRRFV
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA