BacMap

Definition	Geobacter sulfurreducens PCA chromosome, complete genome.
Accession	NC_002939
Length	3,814,139

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The map label for this gene is hflB [C]

Identifier: 39996075

GI number: 39996075

Start: 1048581

End: 1050812

Strand: Direct

Name: hflB [C]

Synonym: GSU0972

Alternate gene names: 39996075

Gene position: 1048581-1050812 (Clockwise)

Preceding gene: 39996073

Following gene: 39996076

Centisome position: 27.49

GC content: 66.35

Gene sequence:

>2232_bases
ATGCCAGGGACGGCACAGCTGCACCGGAATAAGCCCGCCGTCGGCGCCTATGCCGACGGTCCGGAGTATATCCAGGACGA
ACTCCGGTGGCTCGATCTCCTCATCCGTTACCGGCTCGACGGCCGGAACAGGGGCGGAGCCGATCCCTTCGGGCAGTTGC
GGGGGCTCGTCCTCTCGGACGACGAGATCAACGGTCTGCTTTCGGGCGATGCCGGAGGAACTCCCGGAGCTTCGCCTGAG
TGTGGCGCCGAACTGGCCGAGCTGGCGGCCGAAGTTGCGGACCGCCGCTCTGCCACACTCCGAATGGGGACAGCCCTCCC
CCTTGCCGATCTTTCCCGCACGTTTCACCTATCTCCCTTTGAGGAGAAGTGCCTCCTCATCTGCCTTGCCCCCGAACTGG
ACCCGAAGTACGAAAAGCTCTATGCCTATCTCCATGATGACGTAACGCGCCGACGGCCCAGCATCGGGCTGATCCTCGAC
CTCCTCTGCACCTCCTTCCGGGAGCGGGTGGCTGCCCGCACCGTCTTCGATCCCCGGGCTCCGCTGACCAAGTACCGTCT
CGTACAGTTCATTCAAGCCACCCCGGACGGCCCTGTTTCTTTCCCCTCGCGCCAACTCATGCTCAATGGCCGGATTGCCG
GTTACGTGCTGGGGCACGCCCAGCCGGACCCGCACCTGGCCGAAGCGGTCCGCCTGGTCCTGCCCGGCCCCGGCGGCACG
GTATCGCCGGTCGAAGATCGTAACCGGGAACGGGCACGGCAGCTGGTCCGTGCCCACCTTGCGGTGCACGCTTCGGGGGA
GAGCCGACTGGTGCTGTTCTGCCGTGGCCCCCGGGGAGCGGGGAAGCGGGAACTGGTCGAGAGCCTGTGCCGCGACCTCG
GCCTGTGGCTCCTGGTGGCCGATGTGGAGCGGATGCTGGCCGGAAGCCTTCCCTTCGGGGAAATGGCGTGGCTGCTTGGC
CGCGAGGCCGCTCTTCAGCCGGCCGTCGTCTGTCTGGAGGGGATGGATGCGCTCCTGGCGGGGGACAATGACCATACCTC
GGAACTCACGTCGCTCATGGACGCTATCCGGACCTTCTGCCGGGTCACGTTTGTCTGTTCCGGCCGCCCCTGGCGCCCCC
GTGACCGGCATCCCTCCGACGTGTTCATTGAACTGGATTTTCCCCTTCCGGACGAAGGCACGCGGAAACGCCTGTGGGAG
GATGGCTTGAGCGGAAGCCCCCTTGCGGCCGGCATGGGCGCGGCAGATGTCCTGGCCGGCACGTTCCGCTTCACCCCCGG
CCAGATCCGCCAGGCACTGGCCGATGCCCGCGATTTGGCCGTCTGGCACGGAGGGGACGAGGCGAGCGGGGGGAGCGAAG
CCGATCTGCTTCATGCCGCCTGCCGCGCCCGATCCCACACCCGCTTGGGCACACTGGCGCGGCGGCTCGAGCCCGTTCAC
ACCCTGGACGACATCGTCCTCCCGGCCCTCCAGATGGCCCAGTTGCGGGAGATCTGCGCCCAGGTCCGCTACCGGCACCT
GGTTTTCGGCCAGTGGGGATTCGACCGGAAGCTCTCCTCGGGCAAGGGGCTTACGGTTCTCTTTACGGGGCCTCCCGGCA
CGGGCAAGACCATGGCCGCCGCGGTGATTGCCCGCGAACTGGGGTTGGAGCTCTACCGGATCGATCTCTCCCAGGTGGTG
AGCAAGTACATCGGCGAGACGGAGAAAAACCTGGAGCGCATCTTCGCCGAGGCGGAGACCGCCGGCGCCATCCTGTTCTT
CGACGAGGCCGACGCCCTGTTCGGCAGGCGTTCCGAGGTGAAGGACGCCCACGACCGTTATGCGAATATTGAAATCGGCT
ACCTGCTCCAGCGGATGGAGGAGTACAGCGGCATCTCCATTCTGGCCACGAATCTCCGCCAGAACCTGGACGAGGCCTTC
ACCCGCCGCATCCGGATCGTGGTGGAGTTCCCCTTTCCCGACGAGGAATACCGGGAAATGATCTGGCAGCGCATCTTCCC
GCCGGAACTTCCCGTGGGGGACGATGTGGACCTGGGATTCCTGGCCCGCCGGTTCAGAATCTCCGGGGGGGATATCAGGA
ACGTGGCCCTGGGCGCGGTCTTTTTCGCGGCCGAGGAGGGGCGGCCCCTGGCCATGGCGCACCTGGTCCGCGCCCTGGGC
AGGGAGTTGCGCAAGACGGGAAAACCGTGCACCAGGGAGGAGTTCGGAGACTATCTGGAGATGCTGGCGTGA

Upstream 100 bases:

>100_bases
GACGCCCCGGGTGCCGGTTCCGGCGCCGGGGAGCGGTTTCCCGGACGCTACAATCGATACTGCTCTGAACATGCATGTCT
GAGCGATGACGGGGTCTGGT

Downstream 100 bases:

>100_bases
CAGGGATGGAGCCATGAGCGACTACACGGTGATTGCCGATATCGGGGCCACGCTGATCGGCCTGCTGCGGGAGAGCATGG
GCGACCTGCTGTCCGCCGAC

Product: AAA family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 743; Mature: 742

Protein sequence:

>743_residues
MPGTAQLHRNKPAVGAYADGPEYIQDELRWLDLLIRYRLDGRNRGGADPFGQLRGLVLSDDEINGLLSGDAGGTPGASPE
CGAELAELAAEVADRRSATLRMGTALPLADLSRTFHLSPFEEKCLLICLAPELDPKYEKLYAYLHDDVTRRRPSIGLILD
LLCTSFRERVAARTVFDPRAPLTKYRLVQFIQATPDGPVSFPSRQLMLNGRIAGYVLGHAQPDPHLAEAVRLVLPGPGGT
VSPVEDRNRERARQLVRAHLAVHASGESRLVLFCRGPRGAGKRELVESLCRDLGLWLLVADVERMLAGSLPFGEMAWLLG
REAALQPAVVCLEGMDALLAGDNDHTSELTSLMDAIRTFCRVTFVCSGRPWRPRDRHPSDVFIELDFPLPDEGTRKRLWE
DGLSGSPLAAGMGAADVLAGTFRFTPGQIRQALADARDLAVWHGGDEASGGSEADLLHAACRARSHTRLGTLARRLEPVH
TLDDIVLPALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGKGLTVLFTGPPGTGKTMAAAVIARELGLELYRIDLSQVV
SKYIGETEKNLERIFAEAETAGAILFFDEADALFGRRSEVKDAHDRYANIEIGYLLQRMEEYSGISILATNLRQNLDEAF
TRRIRIVVEFPFPDEEYREMIWQRIFPPELPVGDDVDLGFLARRFRISGGDIRNVALGAVFFAAEEGRPLAMAHLVRALG
RELRKTGKPCTREEFGDYLEMLA

Sequences:

>Translated_743_residues
MPGTAQLHRNKPAVGAYADGPEYIQDELRWLDLLIRYRLDGRNRGGADPFGQLRGLVLSDDEINGLLSGDAGGTPGASPE
CGAELAELAAEVADRRSATLRMGTALPLADLSRTFHLSPFEEKCLLICLAPELDPKYEKLYAYLHDDVTRRRPSIGLILD
LLCTSFRERVAARTVFDPRAPLTKYRLVQFIQATPDGPVSFPSRQLMLNGRIAGYVLGHAQPDPHLAEAVRLVLPGPGGT
VSPVEDRNRERARQLVRAHLAVHASGESRLVLFCRGPRGAGKRELVESLCRDLGLWLLVADVERMLAGSLPFGEMAWLLG
REAALQPAVVCLEGMDALLAGDNDHTSELTSLMDAIRTFCRVTFVCSGRPWRPRDRHPSDVFIELDFPLPDEGTRKRLWE
DGLSGSPLAAGMGAADVLAGTFRFTPGQIRQALADARDLAVWHGGDEASGGSEADLLHAACRARSHTRLGTLARRLEPVH
TLDDIVLPALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGKGLTVLFTGPPGTGKTMAAAVIARELGLELYRIDLSQVV
SKYIGETEKNLERIFAEAETAGAILFFDEADALFGRRSEVKDAHDRYANIEIGYLLQRMEEYSGISILATNLRQNLDEAF
TRRIRIVVEFPFPDEEYREMIWQRIFPPELPVGDDVDLGFLARRFRISGGDIRNVALGAVFFAAEEGRPLAMAHLVRALG
RELRKTGKPCTREEFGDYLEMLA
>Mature_742_residues
PGTAQLHRNKPAVGAYADGPEYIQDELRWLDLLIRYRLDGRNRGGADPFGQLRGLVLSDDEINGLLSGDAGGTPGASPEC
GAELAELAAEVADRRSATLRMGTALPLADLSRTFHLSPFEEKCLLICLAPELDPKYEKLYAYLHDDVTRRRPSIGLILDL
LCTSFRERVAARTVFDPRAPLTKYRLVQFIQATPDGPVSFPSRQLMLNGRIAGYVLGHAQPDPHLAEAVRLVLPGPGGTV
SPVEDRNRERARQLVRAHLAVHASGESRLVLFCRGPRGAGKRELVESLCRDLGLWLLVADVERMLAGSLPFGEMAWLLGR
EAALQPAVVCLEGMDALLAGDNDHTSELTSLMDAIRTFCRVTFVCSGRPWRPRDRHPSDVFIELDFPLPDEGTRKRLWED
GLSGSPLAAGMGAADVLAGTFRFTPGQIRQALADARDLAVWHGGDEASGGSEADLLHAACRARSHTRLGTLARRLEPVHT
LDDIVLPALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGKGLTVLFTGPPGTGKTMAAAVIARELGLELYRIDLSQVVS
KYIGETEKNLERIFAEAETAGAILFFDEADALFGRRSEVKDAHDRYANIEIGYLLQRMEEYSGISILATNLRQNLDEAFT
RRIRIVVEFPFPDEEYREMIWQRIFPPELPVGDDVDLGFLARRFRISGGDIRNVALGAVFFAAEEGRPLAMAHLVRALGR
ELRKTGKPCTREEFGDYLEMLA

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI24430155, Length=196, Percent_Identity=33.6734693877551, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI89064750, Length=196, Percent_Identity=33.6734693877551, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI5729991, Length=196, Percent_Identity=33.6734693877551, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI5901990, Length=223, Percent_Identity=32.7354260089686, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI24430151, Length=341, Percent_Identity=26.3929618768328, Blast_Score=91, Evalue=5e-18,
Organism=Homo sapiens, GI157671927, Length=189, Percent_Identity=35.4497354497354, Blast_Score=85, Evalue=3e-16,
Organism=Homo sapiens, GI229577436, Length=503, Percent_Identity=26.0437375745527, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI14149767, Length=231, Percent_Identity=30.7359307359307, Blast_Score=84, Evalue=7e-16,
Organism=Homo sapiens, GI62177112, Length=231, Percent_Identity=30.7359307359307, Blast_Score=84, Evalue=7e-16,
Organism=Homo sapiens, GI4505725, Length=180, Percent_Identity=35.5555555555556, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI6005942, Length=206, Percent_Identity=33.0097087378641, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4506209, Length=261, Percent_Identity=29.8850574712644, Blast_Score=78, Evalue=3e-14,
Organism=Homo sapiens, GI11875211, Length=210, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI40806170, Length=210, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI31742536, Length=142, Percent_Identity=33.8028169014084, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI112789543, Length=142, Percent_Identity=33.8028169014084, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI195539395, Length=184, Percent_Identity=31.5217391304348, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI24497435, Length=191, Percent_Identity=31.9371727748691, Blast_Score=74, Evalue=7e-13,
Organism=Homo sapiens, GI17865802, Length=142, Percent_Identity=35.2112676056338, Blast_Score=73, Evalue=1e-12,
Organism=Homo sapiens, GI21361144, Length=165, Percent_Identity=35.7575757575758, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI45643125, Length=183, Percent_Identity=32.7868852459016, Blast_Score=71, Evalue=5e-12,
Organism=Homo sapiens, GI7019569, Length=173, Percent_Identity=32.3699421965318, Blast_Score=71, Evalue=5e-12,
Organism=Homo sapiens, GI45643123, Length=183, Percent_Identity=32.7868852459016, Blast_Score=70, Evalue=1e-11,
Organism=Homo sapiens, GI75677353, Length=196, Percent_Identity=30.6122448979592, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI7657689, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI21327685, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=3e-11,
Organism=Escherichia coli, GI1789568, Length=203, Percent_Identity=32.0197044334975, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17554784, Length=221, Percent_Identity=31.2217194570136, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563250, Length=191, Percent_Identity=31.9371727748691, Blast_Score=86, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17554786, Length=191, Percent_Identity=31.9371727748691, Blast_Score=79, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI25144278, Length=191, Percent_Identity=31.9371727748691, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17532375, Length=201, Percent_Identity=33.8308457711443, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17531535, Length=240, Percent_Identity=32.0833333333333, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17563248, Length=194, Percent_Identity=33.5051546391753, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71987364, Length=258, Percent_Identity=28.6821705426357, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25144281, Length=191, Percent_Identity=31.9371727748691, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71987372, Length=258, Percent_Identity=28.6821705426357, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI133901658, Length=217, Percent_Identity=30.4147465437788, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86561515, Length=172, Percent_Identity=34.3023255813954, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI133901662, Length=220, Percent_Identity=31.3636363636364, Blast_Score=74, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17508701, Length=165, Percent_Identity=35.7575757575758, Blast_Score=74, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17508421, Length=231, Percent_Identity=28.1385281385281, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI32563584, Length=231, Percent_Identity=28.1385281385281, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17541226, Length=176, Percent_Identity=30.6818181818182, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17541224, Length=176, Percent_Identity=30.6818181818182, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17505546, Length=234, Percent_Identity=29.0598290598291, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI25146157, Length=147, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17554264, Length=207, Percent_Identity=31.4009661835749, Blast_Score=68, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6320077, Length=205, Percent_Identity=35.609756097561, Blast_Score=88, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6324833, Length=236, Percent_Identity=33.0508474576271, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325281, Length=196, Percent_Identity=33.6734693877551, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325431, Length=179, Percent_Identity=35.7541899441341, Blast_Score=85, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6324000, Length=477, Percent_Identity=24.9475890985325, Blast_Score=85, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6324691, Length=190, Percent_Identity=33.1578947368421, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322704, Length=243, Percent_Identity=30.8641975308642, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321465, Length=186, Percent_Identity=30.6451612903226, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321390, Length=265, Percent_Identity=27.9245283018868, Blast_Score=74, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6325183, Length=191, Percent_Identity=28.2722513089005, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320602, Length=248, Percent_Identity=28.2258064516129, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6320887, Length=201, Percent_Identity=27.8606965174129, Blast_Score=71, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6319554, Length=213, Percent_Identity=30.5164319248826, Blast_Score=71, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6320197, Length=191, Percent_Identity=29.8429319371728, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323429, Length=416, Percent_Identity=24.0384615384615, Blast_Score=69, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322994, Length=198, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI18860063, Length=232, Percent_Identity=32.3275862068966, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24644145, Length=225, Percent_Identity=32.4444444444444, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361487, Length=196, Percent_Identity=33.6734693877551, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281360144, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281360140, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281360136, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24644411, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281360142, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21357333, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281360146, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281360138, Length=220, Percent_Identity=31.3636363636364, Blast_Score=88, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24649446, Length=224, Percent_Identity=29.9107142857143, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24663015, Length=221, Percent_Identity=31.6742081447964, Blast_Score=83, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24640100, Length=185, Percent_Identity=32.4324324324324, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17137560, Length=205, Percent_Identity=32.6829268292683, Blast_Score=81, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161076488, Length=205, Percent_Identity=32.6829268292683, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI161076486, Length=205, Percent_Identity=32.6829268292683, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45552965, Length=188, Percent_Identity=32.9787234042553, Blast_Score=80, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281365776, Length=195, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24660075, Length=195, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24581396, Length=147, Percent_Identity=34.6938775510204, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI20129423, Length=184, Percent_Identity=30.9782608695652, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17137738, Length=243, Percent_Identity=30.8641975308642, Blast_Score=78, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17738151, Length=222, Percent_Identity=31.5315315315315, Blast_Score=78, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21355121, Length=188, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24652279, Length=187, Percent_Identity=31.5508021390374, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24656825, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24656820, Length=200, Percent_Identity=31, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24651451, Length=190, Percent_Identity=33.1578947368421, Blast_Score=74, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19920408, Length=191, Percent_Identity=31.9371727748691, Blast_Score=73, Evalue=6e-13,
Organism=Drosophila melanogaster, GI20129529, Length=184, Percent_Identity=30.9782608695652, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17864540, Length=216, Percent_Identity=30.0925925925926, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573010, Length=154, Percent_Identity=33.7662337662338, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24639486, Length=149, Percent_Identity=34.8993288590604, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19921202, Length=193, Percent_Identity=32.1243523316062, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28571849, Length=181, Percent_Identity=31.4917127071823, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571847, Length=181, Percent_Identity=31.4917127071823, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24658770, Length=202, Percent_Identity=31.1881188118812, Blast_Score=70, Evalue=8e-12,
Organism=Drosophila melanogaster, GI18859657, Length=183, Percent_Identity=30.6010928961749, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 82145; Mature: 82014

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTAQLHRNKPAVGAYADGPEYIQDELRWLDLLIRYRLDGRNRGGADPFGQLRGLVLSD
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEECC
DEINGLLSGDAGGTPGASPECGAELAELAAEVADRRSATLRMGTALPLADLSRTFHLSPF
CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCCCCC
EEKCLLICLAPELDPKYEKLYAYLHDDVTRRRPSIGLILDLLCTSFRERVAARTVFDPRA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PLTKYRLVQFIQATPDGPVSFPSRQLMLNGRIAGYVLGHAQPDPHLAEAVRLVLPGPGGT
CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHEEEECCCCCC
VSPVEDRNRERARQLVRAHLAVHASGESRLVLFCRGPRGAGKRELVESLCRDLGLWLLVA
CCCCHHCCHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
DVERMLAGSLPFGEMAWLLGREAALQPAVVCLEGMDALLAGDNDHTSELTSLMDAIRTFC
HHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHH
RVTFVCSGRPWRPRDRHPSDVFIELDFPLPDEGTRKRLWEDGLSGSPLAAGMGAADVLAG
HEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
TFRFTPGQIRQALADARDLAVWHGGDEASGGSEADLLHAACRARSHTRLGTLARRLEPVH
HCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHH
TLDDIVLPALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGKGLTVLFTGPPGTGKTMAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
AVIARELGLELYRIDLSQVVSKYIGETEKNLERIFAEAETAGAILFFDEADALFGRRSEV
HHHHHHHCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHH
KDAHDRYANIEIGYLLQRMEEYSGISILATNLRQNLDEAFTRRIRIVVEFPFPDEEYREM
HHHHHHHCCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHH
IWQRIFPPELPVGDDVDLGFLARRFRISGGDIRNVALGAVFFAAEEGRPLAMAHLVRALG
HHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHH
RELRKTGKPCTREEFGDYLEMLA
HHHHHCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure 
PGTAQLHRNKPAVGAYADGPEYIQDELRWLDLLIRYRLDGRNRGGADPFGQLRGLVLSD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEECC
DEINGLLSGDAGGTPGASPECGAELAELAAEVADRRSATLRMGTALPLADLSRTFHLSPF
CCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCCCCC
EEKCLLICLAPELDPKYEKLYAYLHDDVTRRRPSIGLILDLLCTSFRERVAARTVFDPRA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PLTKYRLVQFIQATPDGPVSFPSRQLMLNGRIAGYVLGHAQPDPHLAEAVRLVLPGPGGT
CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEEECCCCCHHHHHHHEEEECCCCCC
VSPVEDRNRERARQLVRAHLAVHASGESRLVLFCRGPRGAGKRELVESLCRDLGLWLLVA
CCCCHHCCHHHHHHHHHHHHHEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
DVERMLAGSLPFGEMAWLLGREAALQPAVVCLEGMDALLAGDNDHTSELTSLMDAIRTFC
HHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHH
RVTFVCSGRPWRPRDRHPSDVFIELDFPLPDEGTRKRLWEDGLSGSPLAAGMGAADVLAG
HEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHH
TFRFTPGQIRQALADARDLAVWHGGDEASGGSEADLLHAACRARSHTRLGTLARRLEPVH
HCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHH
TLDDIVLPALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGKGLTVLFTGPPGTGKTMAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
AVIARELGLELYRIDLSQVVSKYIGETEKNLERIFAEAETAGAILFFDEADALFGRRSEV
HHHHHHHCCCEEEECHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHH
KDAHDRYANIEIGYLLQRMEEYSGISILATNLRQNLDEAFTRRIRIVVEFPFPDEEYREM
HHHHHHHCCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHH
IWQRIFPPELPVGDDVDLGFLARRFRISGGDIRNVALGAVFFAAEEGRPLAMAHLVRALG
HHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHH
RELRKTGKPCTREEFGDYLEMLA
HHHHHCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]