| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996073
Identifier: 39996073
GI number: 39996073
Start: 1044984
End: 1047935
Strand: Direct
Name: 39996073
Synonym: GSU0970
Alternate gene names: NA
Gene position: 1044984-1047935 (Clockwise)
Preceding gene: 39996072
Following gene: 39996075
Centisome position: 27.4
GC content: 61.69
Gene sequence:
>2952_bases ATGAACAGCAAACGATATCGCTCAGACACGCGACCGGCCGCATGCGCCATCCGCTTGCTTGCCGTGCTGGTTCTGCTGGC CGGTCTGGCGGCCCGGGCCGAAGCCGGGCCGGCCCTTCCGGTCATGGTCAAGGATATCAACACCGCATCGGTACCCGTCT CGTCCAGCCCCTCCGGCATGACGGCCAATGGCGGCATCCTCTTCTTCAGTGCCGGCGACGGCGCCAACGGCCCGGAACTC TGGAAGAGCGACGGTTCCGCGGAAGGGACGGTGCTCGTCAAAGATATCAATGCCGGGCCCGGGCCGGGCACGCCTCAGAA TTTCTCCGTCATGAACGGGATCACCTATTTTTCCGCCATGGACAGCTTCCGCGGCGTGGAACTCTGGAAAAGCGACGGCA CGGCTGCTGGGACGGTCATTGTTAAGGATATCTACCAGGGGGGCGAATCATCCAACCCCCTGGAGTTGACAGTGGCAGGG AACACGCTTTTCTTTTCCGCCGATCATCCCGTCTATGGCAAGGAACTCTGGAAGAGCGACGGCACCGCCGAGGGAACCGT TCTCGTGGCCGATATCGCTGCGGAGGCGAGTTCGACGCCCCAGTGGCTGAGGGCGGTCAACGGTACGCTCTTCTTCGCAG CCGACGACGGTCTCCATGGCCGGGAGCTCTGGAAGAGCGACGGGACGCCGGAAGGCACGGTGATGGTCAAGGATATCAAC CCCTTCGGCGGGTCCGATCCGGGCGAGATGGCGGTGTCCGGCGGCATCCTCTACTTTACCGCCGATGACGGTGAAAATGG CCATGAGCTCTGGAGGAGCGACGGCACCGCCGAAGGGACGTATCTGGTCGCCGATATAGCCCCCGGCGAAGAGAGTTCCT ACCCCTTCGAGCCGGTGGGCATCAATGGCCTGCTCTATTTTACGGCCAATGACGGCTACACCGGGTACGAACTCTGGCAG AGCGACGGCACCCCCGAGGGGACGACGCTGGTGAAGGATATCAATCCGGACGGCGAAGACTCAATGCCCTGGGGCATAGT GGGCATGGACAGGTACGTCTACTTCGCGGCCGATGACGGCGTCAACGGGTATGAACTCTGGCGCACCGACGGCACCATGG GGGGGACGGAGATGGTTGCCGACATCCAGCCCGGGATGGGCGGTTCCATGTACAGCTCTCCCCGGCTGGTGAACGGCATG CTCCTCTTTGCCGCCGACGACGGAGAGCACGGCATCGAGATATGGAAAAGCGACGGCACTGCCGAGGGCACCCTCATGGT CAGGGATATCATCCCGGACGCCATGTCGTGGCCATCCGAGCTCATGGTGCATAACGGTACACTCTACTTCGCAGCCGACG ACGGCGTAAACGGCACGGAGCTCTGGAAGAGCGACGGAACGGCCGAGGGCACGGTGCTGGTGCGGAACATTGCACCCGAG ACGGCCAGCAGTCTTCCCTACCAACTGGCCGTGATGGGGACCACGGTATTCTTTGCCGCGGCCGATACCGATCTTGACTT TGATGTCTGGAAGAGCGACGGTACTGCTGATGGTACGGTGCTCGTCAAGGAGATCAATCCCGAAGGGTGGGCCTATCTGG ACCGGTTGATGGTCGTTGGTGATACCCTTTACTTCCTGGCCGAGGACAACTATGGAGAGGCCAGCCATGGCATCGAACTC TGGAAGAGCGACGGCACCGCCGAAGGCACCAGGATGATCAAGGACATCAACCCCGGGCCCCAGGGGATATTCTTTCCCGG CAACCCCAATTATCCCTTCTCCATGGCCGCCGTCGGCACTACGGTGTATTTCCCCGGTTTTACCGCGGGCAATGGTCATG AACTCTGGAAGAGCGATGGTACCGCCGAAGGGACGGTCCTCGTGAAGGATATCAATCCCGTTTTCGATTTCTCCTCATTT CCCGACAGTTTTACCGCCATGAACGGAGCGGTCTATTTCGTGGCCGATGACGGTACGCATGGCGCCGAGCTCTGGAAGAG CGACGGTACCGCCGACGGCACCCGGATGGTCAGGGATATCTATCCGGACGGCATCGGCTCCAGTCCCTTGTCGCTCACGG TCATGAACAACGTCCTCTACTTTAGTGCCGCCGGTGACGAAGGTGGCTACGGACTCTGGAAGAGCGACGGTACCGCCGAG GGGACCACGTTCGTAAAGGACACCTCTCCCTTCAATCACTCGCTTCTCCCTGCCTACCTGACCCCCGTAAATGGAACTCT CTTCTTCGCCGCCCACGACGAAAACGCCGGATTCGAGCTCTGGAAGAGCGACGGGACCACCGACGGCACCGTGCTGGTGG CCGATATCCTGCCGGGGGAAGGGGCGTCCAATCTGCGCTTGCTTACCGGCGTGAACGGTACCCTGTTTTTCGTGGCCGAC GATGGAGTGCACGGCGAGGAGCTCTGGAAAAGCGACGGGACGCCCGAGGGAACGGTGATGGTGAAGGACATTTTTCCGGG GGATGGGATATCTGGCATCACCTGGATCAAGGTGATGAACGGGATGCTCTATTTTGCGGCCGACGACGGAGTGAACGGCC TCGAACTCTGGCAGAGCGACGGAACCGCCGAGGGGACGGTGCTGGTCACGAACATCGTGGCGGGCCAGGGGAGTTCGTCT CCCTCGTATCCGGTGGTGGCGGGCAATACACTCTACTTTGCCGCTACTGACGGAGGCAGCGGCGTCGAGCTCTGGAAGTT TTCGCCCGATCCGCCCGATGGTGATCTGACCGGCAACGAGACACTGGAGATCCCCGATGTGCTGCGCGCTCTGCGGATTG CGGCCGGCATCGCGGCTCCCACCGTGGCCGACTTCATCCACGGCGATGTGGCCCCCCTTGACGGAAACGGCCGCCCCGCC CCGGACGGCGTGATAGATATGAACGACGTGCTGGTTGTCTTACGCAAGATGCTGGGCGTCGTGTCGTGGTGA
Upstream 100 bases:
>100_bases GGATTTCCGTTAAATTTTCCGCCTGATTCGCCGATAAGCTCGATAATGGCGCGACACGGGCGCTGCACCATGAAGGGGGC TACCAGCCTCGGGGGTAAGA
Downstream 100 bases:
>100_bases CGGGAAGATAATCGGCAGTCCCGCGGCAACGGCAGCTTCGCTGCGCTCGGCGGTCACTCAACCGTTGAGCGCAGCTTTTT TTTCATCCCTACCAGCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Hyalin Repeat Protein; Hyalin Repeat-Containing Protein; Cna B Domain-Containing Protein; Quinoprotein; Cycloinulo-Oligosaccharide Fructanotransferase; Ig Family Protein; Cadherin
Number of amino acids: Translated: 983; Mature: 983
Protein sequence:
>983_residues MNSKRYRSDTRPAACAIRLLAVLVLLAGLAARAEAGPALPVMVKDINTASVPVSSSPSGMTANGGILFFSAGDGANGPEL WKSDGSAEGTVLVKDINAGPGPGTPQNFSVMNGITYFSAMDSFRGVELWKSDGTAAGTVIVKDIYQGGESSNPLELTVAG NTLFFSADHPVYGKELWKSDGTAEGTVLVADIAAEASSTPQWLRAVNGTLFFAADDGLHGRELWKSDGTPEGTVMVKDIN PFGGSDPGEMAVSGGILYFTADDGENGHELWRSDGTAEGTYLVADIAPGEESSYPFEPVGINGLLYFTANDGYTGYELWQ SDGTPEGTTLVKDINPDGEDSMPWGIVGMDRYVYFAADDGVNGYELWRTDGTMGGTEMVADIQPGMGGSMYSSPRLVNGM LLFAADDGEHGIEIWKSDGTAEGTLMVRDIIPDAMSWPSELMVHNGTLYFAADDGVNGTELWKSDGTAEGTVLVRNIAPE TASSLPYQLAVMGTTVFFAAADTDLDFDVWKSDGTADGTVLVKEINPEGWAYLDRLMVVGDTLYFLAEDNYGEASHGIEL WKSDGTAEGTRMIKDINPGPQGIFFPGNPNYPFSMAAVGTTVYFPGFTAGNGHELWKSDGTAEGTVLVKDINPVFDFSSF PDSFTAMNGAVYFVADDGTHGAELWKSDGTADGTRMVRDIYPDGIGSSPLSLTVMNNVLYFSAAGDEGGYGLWKSDGTAE GTTFVKDTSPFNHSLLPAYLTPVNGTLFFAAHDENAGFELWKSDGTTDGTVLVADILPGEGASNLRLLTGVNGTLFFVAD DGVHGEELWKSDGTPEGTVMVKDIFPGDGISGITWIKVMNGMLYFAADDGVNGLELWQSDGTAEGTVLVTNIVAGQGSSS PSYPVVAGNTLYFAATDGGSGVELWKFSPDPPDGDLTGNETLEIPDVLRALRIAAGIAAPTVADFIHGDVAPLDGNGRPA PDGVIDMNDVLVVLRKMLGVVSW
Sequences:
>Translated_983_residues MNSKRYRSDTRPAACAIRLLAVLVLLAGLAARAEAGPALPVMVKDINTASVPVSSSPSGMTANGGILFFSAGDGANGPEL WKSDGSAEGTVLVKDINAGPGPGTPQNFSVMNGITYFSAMDSFRGVELWKSDGTAAGTVIVKDIYQGGESSNPLELTVAG NTLFFSADHPVYGKELWKSDGTAEGTVLVADIAAEASSTPQWLRAVNGTLFFAADDGLHGRELWKSDGTPEGTVMVKDIN PFGGSDPGEMAVSGGILYFTADDGENGHELWRSDGTAEGTYLVADIAPGEESSYPFEPVGINGLLYFTANDGYTGYELWQ SDGTPEGTTLVKDINPDGEDSMPWGIVGMDRYVYFAADDGVNGYELWRTDGTMGGTEMVADIQPGMGGSMYSSPRLVNGM LLFAADDGEHGIEIWKSDGTAEGTLMVRDIIPDAMSWPSELMVHNGTLYFAADDGVNGTELWKSDGTAEGTVLVRNIAPE TASSLPYQLAVMGTTVFFAAADTDLDFDVWKSDGTADGTVLVKEINPEGWAYLDRLMVVGDTLYFLAEDNYGEASHGIEL WKSDGTAEGTRMIKDINPGPQGIFFPGNPNYPFSMAAVGTTVYFPGFTAGNGHELWKSDGTAEGTVLVKDINPVFDFSSF PDSFTAMNGAVYFVADDGTHGAELWKSDGTADGTRMVRDIYPDGIGSSPLSLTVMNNVLYFSAAGDEGGYGLWKSDGTAE GTTFVKDTSPFNHSLLPAYLTPVNGTLFFAAHDENAGFELWKSDGTTDGTVLVADILPGEGASNLRLLTGVNGTLFFVAD DGVHGEELWKSDGTPEGTVMVKDIFPGDGISGITWIKVMNGMLYFAADDGVNGLELWQSDGTAEGTVLVTNIVAGQGSSS PSYPVVAGNTLYFAATDGGSGVELWKFSPDPPDGDLTGNETLEIPDVLRALRIAAGIAAPTVADFIHGDVAPLDGNGRPA PDGVIDMNDVLVVLRKMLGVVSW >Mature_983_residues MNSKRYRSDTRPAACAIRLLAVLVLLAGLAARAEAGPALPVMVKDINTASVPVSSSPSGMTANGGILFFSAGDGANGPEL WKSDGSAEGTVLVKDINAGPGPGTPQNFSVMNGITYFSAMDSFRGVELWKSDGTAAGTVIVKDIYQGGESSNPLELTVAG NTLFFSADHPVYGKELWKSDGTAEGTVLVADIAAEASSTPQWLRAVNGTLFFAADDGLHGRELWKSDGTPEGTVMVKDIN PFGGSDPGEMAVSGGILYFTADDGENGHELWRSDGTAEGTYLVADIAPGEESSYPFEPVGINGLLYFTANDGYTGYELWQ SDGTPEGTTLVKDINPDGEDSMPWGIVGMDRYVYFAADDGVNGYELWRTDGTMGGTEMVADIQPGMGGSMYSSPRLVNGM LLFAADDGEHGIEIWKSDGTAEGTLMVRDIIPDAMSWPSELMVHNGTLYFAADDGVNGTELWKSDGTAEGTVLVRNIAPE TASSLPYQLAVMGTTVFFAAADTDLDFDVWKSDGTADGTVLVKEINPEGWAYLDRLMVVGDTLYFLAEDNYGEASHGIEL WKSDGTAEGTRMIKDINPGPQGIFFPGNPNYPFSMAAVGTTVYFPGFTAGNGHELWKSDGTAEGTVLVKDINPVFDFSSF PDSFTAMNGAVYFVADDGTHGAELWKSDGTADGTRMVRDIYPDGIGSSPLSLTVMNNVLYFSAAGDEGGYGLWKSDGTAE GTTFVKDTSPFNHSLLPAYLTPVNGTLFFAAHDENAGFELWKSDGTTDGTVLVADILPGEGASNLRLLTGVNGTLFFVAD DGVHGEELWKSDGTPEGTVMVKDIFPGDGISGITWIKVMNGMLYFAADDGVNGLELWQSDGTAEGTVLVTNIVAGQGSSS PSYPVVAGNTLYFAATDGGSGVELWKFSPDPPDGDLTGNETLEIPDVLRALRIAAGIAAPTVADFIHGDVAPLDGNGRPA PDGVIDMNDVLVVLRKMLGVVSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103699; Mature: 103699
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKRYRSDTRPAACAIRLLAVLVLLAGLAARAEAGPALPVMVKDINTASVPVSSSPSGM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCE TANGGILFFSAGDGANGPELWKSDGSAEGTVLVKDINAGPGPGTPQNFSVMNGITYFSAM EECCCEEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH DSFRGVELWKSDGTAAGTVIVKDIYQGGESSNPLELTVAGNTLFFSADHPVYGKELWKSD HCCCCEEEECCCCCCEEEEEEEEHHCCCCCCCCEEEEEECCEEEEECCCCCCHHHHHCCC GTAEGTVLVADIAAEASSTPQWLRAVNGTLFFAADDGLHGRELWKSDGTPEGTVMVKDIN CCCCCEEEEEEECCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCEEEEEECC PFGGSDPGEMAVSGGILYFTADDGENGHELWRSDGTAEGTYLVADIAPGEESSYPFEPVG CCCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC INGLLYFTANDGYTGYELWQSDGTPEGTTLVKDINPDGEDSMPWGIVGMDRYVYFAADDG CCEEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEECEEEEEEECCC VNGYELWRTDGTMGGTEMVADIQPGMGGSMYSSPRLVNGMLLFAADDGEHGIEIWKSDGT CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCC AEGTLMVRDIIPDAMSWPSELMVHNGTLYFAADDGVNGTELWKSDGTAEGTVLVRNIAPE CCCEEEEEECCCHHHCCCCHHEEECCEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCC TASSLPYQLAVMGTTVFFAAADTDLDFDVWKSDGTADGTVLVKEINPEGWAYLDRLMVVG HHHCCCEEEEEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCC DTLYFLAEDNYGEASHGIELWKSDGTAEGTRMIKDINPGPQGIFFPGNPNYPFSMAAVGT CEEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEECCCCCCEEEECCCCCCCEEEEEECE TVYFPGFTAGNGHELWKSDGTAEGTVLVKDINPVFDFSSFPDSFTAMNGAVYFVADDGTH EEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCEEEEEECCCCC GAELWKSDGTADGTRMVRDIYPDGIGSSPLSLTVMNNVLYFSAAGDEGGYGLWKSDGTAE HHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEECCCCCCC GTTFVKDTSPFNHSLLPAYLTPVNGTLFFAAHDENAGFELWKSDGTTDGTVLVADILPGE CEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCC GASNLRLLTGVNGTLFFVADDGVHGEELWKSDGTPEGTVMVKDIFPGDGISGITWIKVMN CCCCEEEEECCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHEEECC GMLYFAADDGVNGLELWQSDGTAEGTVLVTNIVAGQGSSSPSYPVVAGNTLYFAATDGGS CEEEEEECCCCCHHEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEECCEEEEEECCCCC GVELWKFSPDPPDGDLTGNETLEIPDVLRALRIAAGIAAPTVADFIHGDVAPLDGNGRPA CEEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCCC PDGVIDMNDVLVVLRKMLGVVSW CCCEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSKRYRSDTRPAACAIRLLAVLVLLAGLAARAEAGPALPVMVKDINTASVPVSSSPSGM CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCE TANGGILFFSAGDGANGPELWKSDGSAEGTVLVKDINAGPGPGTPQNFSVMNGITYFSAM EECCCEEEEECCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHH DSFRGVELWKSDGTAAGTVIVKDIYQGGESSNPLELTVAGNTLFFSADHPVYGKELWKSD HCCCCEEEECCCCCCEEEEEEEEHHCCCCCCCCEEEEEECCEEEEECCCCCCHHHHHCCC GTAEGTVLVADIAAEASSTPQWLRAVNGTLFFAADDGLHGRELWKSDGTPEGTVMVKDIN CCCCCEEEEEEECCCCCCCHHHHHHHCCEEEEEECCCCCHHHHHCCCCCCCCEEEEEECC PFGGSDPGEMAVSGGILYFTADDGENGHELWRSDGTAEGTYLVADIAPGEESSYPFEPVG CCCCCCCCCEEEECCEEEEECCCCCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCC INGLLYFTANDGYTGYELWQSDGTPEGTTLVKDINPDGEDSMPWGIVGMDRYVYFAADDG CCEEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEECEEEEEEECCC VNGYELWRTDGTMGGTEMVADIQPGMGGSMYSSPRLVNGMLLFAADDGEHGIEIWKSDGT CCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCC AEGTLMVRDIIPDAMSWPSELMVHNGTLYFAADDGVNGTELWKSDGTAEGTVLVRNIAPE CCCEEEEEECCCHHHCCCCHHEEECCEEEEEECCCCCHHHHCCCCCCCCCEEEEEECCCC TASSLPYQLAVMGTTVFFAAADTDLDFDVWKSDGTADGTVLVKEINPEGWAYLDRLMVVG HHHCCCEEEEEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCC DTLYFLAEDNYGEASHGIELWKSDGTAEGTRMIKDINPGPQGIFFPGNPNYPFSMAAVGT CEEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEECCCCCCEEEECCCCCCCEEEEEECE TVYFPGFTAGNGHELWKSDGTAEGTVLVKDINPVFDFSSFPDSFTAMNGAVYFVADDGTH EEEECCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCEEEEEECCCCC GAELWKSDGTADGTRMVRDIYPDGIGSSPLSLTVMNNVLYFSAAGDEGGYGLWKSDGTAE HHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCCCCCEEECCCCCCC GTTFVKDTSPFNHSLLPAYLTPVNGTLFFAAHDENAGFELWKSDGTTDGTVLVADILPGE CEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCC GASNLRLLTGVNGTLFFVADDGVHGEELWKSDGTPEGTVMVKDIFPGDGISGITWIKVMN CCCCEEEEECCCEEEEEEECCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHEEECC GMLYFAADDGVNGLELWQSDGTAEGTVLVTNIVAGQGSSSPSYPVVAGNTLYFAATDGGS CEEEEEECCCCCHHEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEECCEEEEEECCCCC GVELWKFSPDPPDGDLTGNETLEIPDVLRALRIAAGIAAPTVADFIHGDVAPLDGNGRPA CEEEEEECCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHCCCCEECCCCCCCC PDGVIDMNDVLVVLRKMLGVVSW CCCEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA