| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39996041
Identifier: 39996041
GI number: 39996041
Start: 1008591
End: 1009343
Strand: Direct
Name: 39996041
Synonym: GSU0938
Alternate gene names: NA
Gene position: 1008591-1009343 (Clockwise)
Preceding gene: 39996040
Following gene: 39996042
Centisome position: 26.44
GC content: 59.63
Gene sequence:
>753_bases ATGAAAATGACGATGAAGATTCTTTCCCTGACCACAGCACTCGTTACCATGATCACCGGCGTTGCCCTGGCGACCCCCTC CACCCAGGTCTGGATTCCGTCCACCGATGTGCAGGCCTTCGGCACGGCCCACCTCGGCATCGACAATTACCTGAGGGTCT CCAAGAATCCCGACGGCAGCCGCCAGCCCAACACCTACGACCTGGGCCTGACCTTCGGCCTTCTCCCCTTCGAGAAGCTC CAGATGGAAGCGGGCGTAGACTACATGGTGAATGCAACCTCCCCCGGCGACAGCCATCCCTTCTACCTCAACGTGAAGCT GGCAACCCCCGAGGGGTCGCTCTTCGGGTACTCGCCCGCCATTGCCGTAGGTGCCTACAACATCGGCTTCAAGGAAGACG TCTCTGACCAGAACATCGTGTACGGGCTCGTCGCCAAGACCCTGCCGGTTGTGGGGAGACTGTCGGCGGGCTACTTCGTC GGGAACAGTGCGGTGCTGAACGACGCGAACGGCGAGAACGACAACCATGGCGTGCTCCTTTCCTGGGACCGTACCATGAG CGAAATCTCCGACAAGCTGTGGGTGGCGGTCGACTACCAGGGGAGCGACAGCTTCATGGGAGCCCTGAACTTCGGTGTTT CCTGGGCCTTCTCCAAGAACGTATCGCTCCTCGTGGGCTACGACATCTACAACAGCTCGGTAACGGGCGGGAAGAATACC TTCACCACCCAGCTCGACATCAATTTCCCTTAA
Upstream 100 bases:
>100_bases GCGCCTTTCTTTTTTTACATTGTGCGGAAAGGAGGAGAAGCTGAACGTCGTTGGGAGGACATTCGTGAATGCAATTATTA CTGACAAAGGAGAAGCATCA
Downstream 100 bases:
>100_bases CCGGGAGCAGGATCGGTTCCTGTCCCACGTCCACATACACGGAGGCACGCAATGAAGCTAATCGAGGCGATAATCAAACC GTTCAAGCTGGATGAAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKMTMKILSLTTALVTMITGVALATPSTQVWIPSTDVQAFGTAHLGIDNYLRVSKNPDGSRQPNTYDLGLTFGLLPFEKL QMEAGVDYMVNATSPGDSHPFYLNVKLATPEGSLFGYSPAIAVGAYNIGFKEDVSDQNIVYGLVAKTLPVVGRLSAGYFV GNSAVLNDANGENDNHGVLLSWDRTMSEISDKLWVAVDYQGSDSFMGALNFGVSWAFSKNVSLLVGYDIYNSSVTGGKNT FTTQLDINFP
Sequences:
>Translated_250_residues MKMTMKILSLTTALVTMITGVALATPSTQVWIPSTDVQAFGTAHLGIDNYLRVSKNPDGSRQPNTYDLGLTFGLLPFEKL QMEAGVDYMVNATSPGDSHPFYLNVKLATPEGSLFGYSPAIAVGAYNIGFKEDVSDQNIVYGLVAKTLPVVGRLSAGYFV GNSAVLNDANGENDNHGVLLSWDRTMSEISDKLWVAVDYQGSDSFMGALNFGVSWAFSKNVSLLVGYDIYNSSVTGGKNT FTTQLDINFP >Mature_250_residues MKMTMKILSLTTALVTMITGVALATPSTQVWIPSTDVQAFGTAHLGIDNYLRVSKNPDGSRQPNTYDLGLTFGLLPFEKL QMEAGVDYMVNATSPGDSHPFYLNVKLATPEGSLFGYSPAIAVGAYNIGFKEDVSDQNIVYGLVAKTLPVVGRLSAGYFV GNSAVLNDANGENDNHGVLLSWDRTMSEISDKLWVAVDYQGSDSFMGALNFGVSWAFSKNVSLLVGYDIYNSSVTGGKNT FTTQLDINFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26939; Mature: 26939
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTMKILSLTTALVTMITGVALATPSTQVWIPSTDVQAFGTAHLGIDNYLRVSKNPDGS CCEEHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCC RQPNTYDLGLTFGLLPFEKLQMEAGVDYMVNATSPGDSHPFYLNVKLATPEGSLFGYSPA CCCCEEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCE IAVGAYNIGFKEDVSDQNIVYGLVAKTLPVVGRLSAGYFVGNSAVLNDANGENDNHGVLL EEEEEEECCCCCCCCCCCEEEEEHHHHHHHHEECCCCEEECCCEEEECCCCCCCCCCEEE SWDRTMSEISDKLWVAVDYQGSDSFMGALNFGVSWAFSKNVSLLVGYDIYNSSVTGGKNT EECHHHHHCCCEEEEEEEECCCCCEEEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCE FTTQLDINFP EEEEEEEECC >Mature Secondary Structure MKMTMKILSLTTALVTMITGVALATPSTQVWIPSTDVQAFGTAHLGIDNYLRVSKNPDGS CCEEHHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCCEEEEEEECCCCEEEEECCCCCC RQPNTYDLGLTFGLLPFEKLQMEAGVDYMVNATSPGDSHPFYLNVKLATPEGSLFGYSPA CCCCEEEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCE IAVGAYNIGFKEDVSDQNIVYGLVAKTLPVVGRLSAGYFVGNSAVLNDANGENDNHGVLL EEEEEEECCCCCCCCCCCEEEEEHHHHHHHHEECCCCEEECCCEEEECCCCCCCCCCEEE SWDRTMSEISDKLWVAVDYQGSDSFMGALNFGVSWAFSKNVSLLVGYDIYNSSVTGGKNT EECHHHHHCCCEEEEEEEECCCCCEEEEEECCEEEEECCCCEEEEEEEEECCCCCCCCCE FTTQLDINFP EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA