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The map label for this gene is 39995992

Identifier: 39995992

GI number: 39995992

Start: 947252

End: 948577

Strand: Direct

Name: 39995992

Synonym: GSU0886

Alternate gene names: NA

Gene position: 947252-948577 (Clockwise)

Preceding gene: 39995990

Following gene: 39995997

Centisome position: 24.84

GC content: 66.67

Gene sequence:

>1326_bases
ATGAAACGAAAAACCCTCCCCAAACTCCTCTACGCCGACGCCAAAGGAAACATCTTCGATCATCCCCATCTCTGCATGGC
CGGCATGAGCGGCTCCGAAGCGGTGCTCCCCGAATCGGTGGAGCTGATCCCGCTGCCCGAGGGGAGCCGGCTCTTTACCA
TCCCGGATACGCCGCCCGTTGCCTGGGACGAGCAGCAGCGGAAGTTCGTGACCGTGGCCTCGGTGCGGGAGGGGCGGCGC
CCGATGCCGGTGCAGGCGGTGTCGGCCTTCATGGCGCCGGGGTACGTGCGGCTGCTGCTGCCGGCGTGCGATTATTCGCG
CAAGAAGGTGCACCTCCCCCTCTGGTCGTACACGGCGGTGGGCTGGGACGAGGAGCGGGACTGCTTCGTGGTGGCGGCGA
GCCGGGTGGACACCAACCAGAACTGGAACCCCTGCAACTACGACGACCGGAAGCTGGACCCCCTGGTGCGGCAGCGGTTG
GCGGAAATGCCCCACAACCGGCTCCTGGAGCAGTTGGCCCGCTGCGCGGTGGATTACCACTGCTTCGCGGCCAAGAACCT
CTTTTTCCGCCGATGGGAGGCGCCGCTCCCCACCTCGCCGGCGTGCAACTCGCGCTGCCTCGGGTGCATCAGCCTCCAGC
CCTCGGACTGCTGCCCGGCCAACCACGAGCGGATCGGCTTCGTCCCCACGCCGGAGGAGATCGTGGAACTGGCCCTGCCG
CACCTGCTGGAGGCGCCGGAACCCATCGTCTCCTACGGCCAGGGGTGCGAGGGGGACCCGATCATGCAGGCGGACACCGT
GGCCGAGGCCACGCGGCGGCTGAAGGCGGCCACTTCCCGGGGGACGGTGAACTTCAACTCCAACGGCTCCTTCCCGGACC
GGATCGCCATGCTCTGCGACGCGGGCATGGACTCCATGCGCTTTTCCATGAACTCGGTGCGGGAGGAGGTCTACGACCGG
TACTACCGGCCGGTGGGATACCGCTTCGCCGAGGTGAAGGAGTCGGTGCGGCTGGCGGGGGAGCGGGGGCTGTTCACCAT
GATCAACTACCTGGTGTCGCCGGGGGTGTCGGACAGCGCCGACGAGGTGGAGGCCCTGCTCCGCTTCATCGGCGAGACCG
GGGTGAAGATGATCCAGATGCGGAACCTGTCCATTGACCCGGATTTCTACAACAAGCGGATGGGCGCCACGGGGCGGGGC
ATCGGCATGTACCGGATGCTGGAGCGGGTGAAGCGGGAGTTTCCCCACATCCAGTACGGCTACTACAACCGGACCAGAGA
GAACTTCTTTCCGGCGGGGTATGAGAAGGGGTGGCCGATCCGCTAG

Upstream 100 bases:

>100_bases
CCGACGGGTGACGCGGCGGGGTTCGCCCGGGCATGCCCTCCGGTGTTCGTAACGTCCCCCCGGTTGGCAACGTCGCACTG
CCTGTGGTAAGGTTGCAGCC

Downstream 100 bases:

>100_bases
TCGGGCAGCCCTTCCACAACCATCCGGGCCCACTCGTGCAGCGCCAGATCCCGGTAGGTCTTGAAAATCCGTCCATCTCT
CGTGCGGAAGAGCTTTTTGG

Product: radical SAM protein

Products: NA

Alternate protein names: Radical SAM Domain-Containing Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical SAM Domain Family Protein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKRKTLPKLLYADAKGNIFDHPHLCMAGMSGSEAVLPESVELIPLPEGSRLFTIPDTPPVAWDEQQRKFVTVASVREGRR
PMPVQAVSAFMAPGYVRLLLPACDYSRKKVHLPLWSYTAVGWDEERDCFVVAASRVDTNQNWNPCNYDDRKLDPLVRQRL
AEMPHNRLLEQLARCAVDYHCFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPANHERIGFVPTPEEIVELALP
HLLEAPEPIVSYGQGCEGDPIMQADTVAEATRRLKAATSRGTVNFNSNGSFPDRIAMLCDAGMDSMRFSMNSVREEVYDR
YYRPVGYRFAEVKESVRLAGERGLFTMINYLVSPGVSDSADEVEALLRFIGETGVKMIQMRNLSIDPDFYNKRMGATGRG
IGMYRMLERVKREFPHIQYGYYNRTRENFFPAGYEKGWPIR

Sequences:

>Translated_441_residues
MKRKTLPKLLYADAKGNIFDHPHLCMAGMSGSEAVLPESVELIPLPEGSRLFTIPDTPPVAWDEQQRKFVTVASVREGRR
PMPVQAVSAFMAPGYVRLLLPACDYSRKKVHLPLWSYTAVGWDEERDCFVVAASRVDTNQNWNPCNYDDRKLDPLVRQRL
AEMPHNRLLEQLARCAVDYHCFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPANHERIGFVPTPEEIVELALP
HLLEAPEPIVSYGQGCEGDPIMQADTVAEATRRLKAATSRGTVNFNSNGSFPDRIAMLCDAGMDSMRFSMNSVREEVYDR
YYRPVGYRFAEVKESVRLAGERGLFTMINYLVSPGVSDSADEVEALLRFIGETGVKMIQMRNLSIDPDFYNKRMGATGRG
IGMYRMLERVKREFPHIQYGYYNRTRENFFPAGYEKGWPIR
>Mature_441_residues
MKRKTLPKLLYADAKGNIFDHPHLCMAGMSGSEAVLPESVELIPLPEGSRLFTIPDTPPVAWDEQQRKFVTVASVREGRR
PMPVQAVSAFMAPGYVRLLLPACDYSRKKVHLPLWSYTAVGWDEERDCFVVAASRVDTNQNWNPCNYDDRKLDPLVRQRL
AEMPHNRLLEQLARCAVDYHCFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPANHERIGFVPTPEEIVELALP
HLLEAPEPIVSYGQGCEGDPIMQADTVAEATRRLKAATSRGTVNFNSNGSFPDRIAMLCDAGMDSMRFSMNSVREEVYDR
YYRPVGYRFAEVKESVRLAGERGLFTMINYLVSPGVSDSADEVEALLRFIGETGVKMIQMRNLSIDPDFYNKRMGATGRG
IGMYRMLERVKREFPHIQYGYYNRTRENFFPAGYEKGWPIR

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50031; Mature: 50031

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKTLPKLLYADAKGNIFDHPHLCMAGMSGSEAVLPESVELIPLPEGSRLFTIPDTPPV
CCCCCCCHHHEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC
AWDEQQRKFVTVASVREGRRPMPVQAVSAFMAPGYVRLLLPACDYSRKKVHLPLWSYTAV
CCCCCHHHEEEEHHHHCCCCCCCHHHHHHHHCCCCEEEEEHHCCCCCCEEEEEEEEEEEC
GWDEERDCFVVAASRVDTNQNWNPCNYDDRKLDPLVRQRLAEMPHNRLLEQLARCAVDYH
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
CFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPANHERIGFVPTPEEIVELALP
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHH
HLLEAPEPIVSYGQGCEGDPIMQADTVAEATRRLKAATSRGTVNFNSNGSFPDRIAMLCD
HHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
AGMDSMRFSMNSVREEVYDRYYRPVGYRFAEVKESVRLAGERGLFTMINYLVSPGVSDSA
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
DEVEALLRFIGETGVKMIQMRNLSIDPDFYNKRMGATGRGIGMYRMLERVKREFPHIQYG
HHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEC
YYNRTRENFFPAGYEKGWPIR
CCCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRKTLPKLLYADAKGNIFDHPHLCMAGMSGSEAVLPESVELIPLPEGSRLFTIPDTPPV
CCCCCCCHHHEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC
AWDEQQRKFVTVASVREGRRPMPVQAVSAFMAPGYVRLLLPACDYSRKKVHLPLWSYTAV
CCCCCHHHEEEEHHHHCCCCCCCHHHHHHHHCCCCEEEEEHHCCCCCCEEEEEEEEEEEC
GWDEERDCFVVAASRVDTNQNWNPCNYDDRKLDPLVRQRLAEMPHNRLLEQLARCAVDYH
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
CFAAKNLFFRRWEAPLPTSPACNSRCLGCISLQPSDCCPANHERIGFVPTPEEIVELALP
HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCHHHHHHHHHH
HLLEAPEPIVSYGQGCEGDPIMQADTVAEATRRLKAATSRGTVNFNSNGSFPDRIAMLCD
HHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
AGMDSMRFSMNSVREEVYDRYYRPVGYRFAEVKESVRLAGERGLFTMINYLVSPGVSDSA
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
DEVEALLRFIGETGVKMIQMRNLSIDPDFYNKRMGATGRGIGMYRMLERVKREFPHIQYG
HHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEC
YYNRTRENFFPAGYEKGWPIR
CCCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA