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The map label for this gene is 39995963

Identifier: 39995963

GI number: 39995963

Start: 916867

End: 917445

Strand: Direct

Name: 39995963

Synonym: GSU0857

Alternate gene names: NA

Gene position: 916867-917445 (Clockwise)

Preceding gene: 39995960

Following gene: 39995964

Centisome position: 24.04

GC content: 60.97

Gene sequence:

>579_bases
GTGGACGCAGCCGTTTTTTTTACGACCTTCGGTATTATCTTCCTGGCCGAACTGGGCGACAAGACCCAGCTTACCGCCAT
GGCCCTGGCCACCCGCTACCCCTGGAAGAAGATTTTCATCGGCATCGCCCTGGCGTTTGCCGTTCTCAACGTGGGCGCCG
TGGCGCTGGGCAAGTTTCTCTTTGCCGTGCTGCCCATTTTCTGGATCAAGCTCGTCTCAGGCGGTCTCTTCCTCTTCTTT
GGCATCTCTACCCTCCGGGGAGGAGACGGTGACAATGACGGCGAAAAAGGCCCCGCCTCGGCCCGAGGGCCGATGCTCAC
GGCGTTTCTGATGATCCTGCTGGCCGAGCTGGGCGACAAGACCCAACTCGTAACCACCAGTCTGGCAGCCCAGCACGAAT
CGCCTCTGTCGGTATTTGCCGGCTCGACCCTGGCCCTCTGGGGGGTATCGCTCCTGGGCATATTCATCGGCAAGCAGCTC
ATGCGGGTCATCCCCCTCGGCACGATTCACCGGGTGGCCGGGGTGCTTTTTCTCGTCTTTGGCCTCGTCATCCTCTACCA
GACCTTCACCGGGCCCTGA

Upstream 100 bases:

>100_bases
TTTTCGTGGCGGCACATTCCGGTCCTTGCATATCTCCGGGACATGCGGTACCATCCCCGGTCTGTTTCCGCCCATAACCA
TTTTAAGAGGGACAATTTCC

Downstream 100 bases:

>100_bases
GCGATTGCATTTTTCGGGGCGGCCCCGTACAATTGTCCCTGATTGAGCGGGTGTCGGCATGGTGATCTGCGGGCCGCTCC
GACAGCCCCTGTCCAGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDAAVFFTTFGIIFLAELGDKTQLTAMALATRYPWKKIFIGIALAFAVLNVGAVALGKFLFAVLPIFWIKLVSGGLFLFF
GISTLRGGDGDNDGEKGPASARGPMLTAFLMILLAELGDKTQLVTTSLAAQHESPLSVFAGSTLALWGVSLLGIFIGKQL
MRVIPLGTIHRVAGVLFLVFGLVILYQTFTGP

Sequences:

>Translated_192_residues
MDAAVFFTTFGIIFLAELGDKTQLTAMALATRYPWKKIFIGIALAFAVLNVGAVALGKFLFAVLPIFWIKLVSGGLFLFF
GISTLRGGDGDNDGEKGPASARGPMLTAFLMILLAELGDKTQLVTTSLAAQHESPLSVFAGSTLALWGVSLLGIFIGKQL
MRVIPLGTIHRVAGVLFLVFGLVILYQTFTGP
>Mature_192_residues
MDAAVFFTTFGIIFLAELGDKTQLTAMALATRYPWKKIFIGIALAFAVLNVGAVALGKFLFAVLPIFWIKLVSGGLFLFF
GISTLRGGDGDNDGEKGPASARGPMLTAFLMILLAELGDKTQLVTTSLAAQHESPLSVFAGSTLALWGVSLLGIFIGKQL
MRVIPLGTIHRVAGVLFLVFGLVILYQTFTGP

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001727 [H]

Pfam domain/function: PF01169 UPF0016 [H]

EC number: NA

Molecular weight: Translated: 20442; Mature: 20442

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAVFFTTFGIIFLAELGDKTQLTAMALATRYPWKKIFIGIALAFAVLNVGAVALGKFL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVLPIFWIKLVSGGLFLFFGISTLRGGDGDNDGEKGPASARGPMLTAFLMILLAELGDK
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
TQLVTTSLAAQHESPLSVFAGSTLALWGVSLLGIFIGKQLMRVIPLGTIHRVAGVLFLVF
HHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLVILYQTFTGP
HHHHHHHHHCCC
>Mature Secondary Structure
MDAAVFFTTFGIIFLAELGDKTQLTAMALATRYPWKKIFIGIALAFAVLNVGAVALGKFL
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FAVLPIFWIKLVSGGLFLFFGISTLRGGDGDNDGEKGPASARGPMLTAFLMILLAELGDK
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
TQLVTTSLAAQHESPLSVFAGSTLALWGVSLLGIFIGKQLMRVIPLGTIHRVAGVLFLVF
HHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GLVILYQTFTGP
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]