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The map label for this gene is ydiK [C]

Identifier: 39995960

GI number: 39995960

Start: 913520

End: 914611

Strand: Direct

Name: ydiK [C]

Synonym: GSU0854

Alternate gene names: 39995960

Gene position: 913520-914611 (Clockwise)

Preceding gene: 39995959

Following gene: 39995963

Centisome position: 23.95

GC content: 62.36

Gene sequence:

>1092_bases
ATGGACCGGGGACACTTTTTCGCGCTGCTCGGTTTTCTGGCCGTTGCCCTCATGCTGTACCTCGTCTATGCCATTGTGGC
GCCGTTCCTGGCGCCGCTGGGATGGGCCGCCGTCATCGGCGTGCTCACCTTTCCCCTCTACCGGAAGCTCCGGGCCGGGG
TCGGCGGCAGGGAGTTGCTTGCCGCGGGAATAATGACCCCCGCAGTGGTCATCACCCTCGTGGTCCCCGTGGTCGGCCTC
ACGTTCTTCATCATCCAGGAAGCGACCCTCGCCTACCAGTTCCTGGAACGGGTCGCCGCCGACGGAGGAGAGGCGGTGCT
GGCCAAGATTCGGGCCCACCACCTGATACACCCCTGGATTACGCGGATCGAGGCTTACACCGGCCCCCTCAGCCTTGAGA
TCGACACCACCTTTCTCCCCGAGGTGAAAGAGGTGGCGGCCAAGATCCTCGGTTACTCCAAGGAGGCGGTCAAGAACGCC
TTCCTCTTTATCCTCAAGATTATCCTGATGGTGATTGCCCTGTTCTTCATCTATCTCGACGGCGAACGGGTCCAGCGCCG
GGTTCTCGCGATCATTCCCCTCACCGAGCAGCACAAGATCGAACTTTCCGATACCGTTCGGCGGGTGCTCACAGCGGTCA
TGTTCGGCGTTTTTCTCACCTGCCTCGTGCAGGGCGCCCTCGGTGGCATCGGCCTGTTGGTTGCCGGTATCCCCTCGCCG
GTCCTCTTCGGAGCCATAATGGCAGTCTGCGCCCTGATCCCGGTGGTGGGAACGGCCCTCATCTGGTTGCCTGCCGCTAT
CTACCTGCTGCTTAACGGGCAAATAGTCCAGGGGGTCGGGCTCATGATCTGGGGATTTGCCGTGGTTAGCTCCATCGACA
ACGTGATCCGTCCCTTTTTCATCAGCGGCAAGGCCAAGCTGCCGGTGCTCGTCATCGCCATTGGCGGCCTGGGAGGTCTT
GCCTCCTTCGGGCTGCTGGGGGCCGTGATCGGTCCCCTCGTGCTTGCCTTGTTCCTGGCACTCTTCGATATGTATCAGGA
GGAAATGGCGGGACGCGACGATGACGCCGGGCCCCGCCCGGGGGAGGGTTAG

Upstream 100 bases:

>100_bases
GCGAGGAGGTCAAGCAGACGGCGATCGTCAAGGTGCGCATCGTGGAAAATCTGCCGCCCCAGGCGGGTGACGAACAGTAC
GGAACGGAGCACGAGTAGGC

Downstream 100 bases:

>100_bases
GGAAGGCTTGGTTATCCGCGCTGGGCGGTGCGGGTTCTCCGGTTGCCGATGGTGACCGAGGTGAGGATCGAGATTGCCAG
CACCCCCACGATGGTTCCCA

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MDRGHFFALLGFLAVALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELLAAGIMTPAVVITLVVPVVGL
TFFIIQEATLAYQFLERVAADGGEAVLAKIRAHHLIHPWITRIEAYTGPLSLEIDTTFLPEVKEVAAKILGYSKEAVKNA
FLFILKIILMVIALFFIYLDGERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSP
VLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFFISGKAKLPVLVIAIGGLGGL
ASFGLLGAVIGPLVLALFLALFDMYQEEMAGRDDDAGPRPGEG

Sequences:

>Translated_363_residues
MDRGHFFALLGFLAVALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELLAAGIMTPAVVITLVVPVVGL
TFFIIQEATLAYQFLERVAADGGEAVLAKIRAHHLIHPWITRIEAYTGPLSLEIDTTFLPEVKEVAAKILGYSKEAVKNA
FLFILKIILMVIALFFIYLDGERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSP
VLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFFISGKAKLPVLVIAIGGLGGL
ASFGLLGAVIGPLVLALFLALFDMYQEEMAGRDDDAGPRPGEG
>Mature_363_residues
MDRGHFFALLGFLAVALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELLAAGIMTPAVVITLVVPVVGL
TFFIIQEATLAYQFLERVAADGGEAVLAKIRAHHLIHPWITRIEAYTGPLSLEIDTTFLPEVKEVAAKILGYSKEAVKNA
FLFILKIILMVIALFFIYLDGERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSP
VLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFFISGKAKLPVLVIAIGGLGGL
ASFGLLGAVIGPLVLALFLALFDMYQEEMAGRDDDAGPRPGEG

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=367, Percent_Identity=28.6103542234332, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38828; Mature: 38828

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRGHFFALLGFLAVALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AAGIMTPAVVITLVVPVVGLTFFIIQEATLAYQFLERVAADGGEAVLAKIRAHHLIHPWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TRIEAYTGPLSLEIDTTFLPEVKEVAAKILGYSKEAVKNAFLFILKIILMVIALFFIYLD
HHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSP
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGKAKLPVLVIAIGGLGGLASFGLLGAVIGPLVLALFLALFDMYQEEMAGRDDDAGPRP
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GEG
CCC
>Mature Secondary Structure
MDRGHFFALLGFLAVALMLYLVYAIVAPFLAPLGWAAVIGVLTFPLYRKLRAGVGGRELL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AAGIMTPAVVITLVVPVVGLTFFIIQEATLAYQFLERVAADGGEAVLAKIRAHHLIHPWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
TRIEAYTGPLSLEIDTTFLPEVKEVAAKILGYSKEAVKNAFLFILKIILMVIALFFIYLD
HHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GERVQRRVLAIIPLTEQHKIELSDTVRRVLTAVMFGVFLTCLVQGALGGIGLLVAGIPSP
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VLFGAIMAVCALIPVVGTALIWLPAAIYLLLNGQIVQGVGLMIWGFAVVSSIDNVIRPFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISGKAKLPVLVIAIGGLGGLASFGLLGAVIGPLVLALFLALFDMYQEEMAGRDDDAGPRP
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GEG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]